RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 MAST3O60307 1309 aa14.66□□□□□ -0.06
CACNA1C-228ENST00000492150 ITGB8P26012 769 aa14.65□□□□□ -0.06
CACNA1C-228ENST00000492150 RGS2P41220 211 aa14.65□□□□□ -0.06
CACNA1C-228ENST00000492150 FPGSQ05932 587 aa14.65□□□□□ -0.06
CACNA1C-228ENST00000492150 PABPC4Q13310 644 aaKnown RBP eCLIP14.65□□□□□ -0.06
CACNA1C-228ENST00000492150 APBA2Q99767 749 aa14.65□□□□□ -0.06
CACNA1C-228ENST00000492150 TACC3Q9Y6A5 838 aa14.65□□□□□ -0.06
CACNA1C-228ENST00000492150 KIF16BQ96L93 1317 aa14.65□□□□□ -0.06
CACNA1C-228ENST00000492150 IFIT1P09914 478 aaKnown RBP14.64□□□□□ -0.07
CACNA1C-228ENST00000492150 CDC42EP5Q6NZY7 148 aa14.64□□□□□ -0.07
CACNA1C-228ENST00000492150 COG5Q9UP83 839 aa14.64□□□□□ -0.07
CACNA1C-228ENST00000492150 GBF1Q92538 1859 aa14.63□□□□□ -0.07
CACNA1C-228ENST00000492150 KIAA0355O15063 1070 aa14.63□□□□□ -0.07
CACNA1C-228ENST00000492150 PBX2P40425 430 aa14.63□□□□□ -0.07
CACNA1C-228ENST00000492150 TCP10Q12799 353 aa14.63□□□□□ -0.07
CACNA1C-228ENST00000492150 NFIAQ12857 509 aa14.63□□□□□ -0.07
CACNA1C-228ENST00000492150 PUM3Q15397 648 aaKnown RBP14.63□□□□□ -0.07
CACNA1C-228ENST00000492150 DIXDC1Q155Q3 683 aa14.63□□□□□ -0.07
CACNA1C-228ENST00000492150 CCL14Q16627 93 aa14.63□□□□□ -0.07
CACNA1C-228ENST00000492150 RASIP1Q5U651 963 aa14.63□□□□□ -0.07
CACNA1C-228ENST00000492150 FAM198AQ9UFP1 575 aa14.63□□□□□ -0.07
CACNA1C-228ENST00000492150 TRIM75PA6NK02 468 aa14.62□□□□□ -0.07
CACNA1C-228ENST00000492150 MAPK4P31152 587 aa14.62□□□□□ -0.07
CACNA1C-228ENST00000492150 RFX5P48382 616 aaPredicted RBP14.62□□□□□ -0.07
CACNA1C-228ENST00000492150 RAB30Q15771 203 aa14.62□□□□□ -0.07
CACNA1C-228ENST00000492150 MORN1Q5T089 497 aa14.62□□□□□ -0.07
CACNA1C-228ENST00000492150 MRPL50Q8N5N7 158 aaKnown RBP14.62□□□□□ -0.07
CACNA1C-228ENST00000492150 ARRDC4Q8NCT1 418 aa14.62□□□□□ -0.07
CACNA1C-228ENST00000492150 WDR66Q8TBY9 1149 aa14.62□□□□□ -0.07
CACNA1C-228ENST00000492150 USP44Q9H0E7 712 aa14.62□□□□□ -0.07
CACNA1C-228ENST00000492150 KBTBD13C9JR72 458 aa14.61□□□□□ -0.07
CACNA1C-228ENST00000492150 CLTBP09497 229 aa14.61□□□□□ -0.07
CACNA1C-228ENST00000492150 RAG1P15918 1043 aa14.61□□□□□ -0.07
CACNA1C-228ENST00000492150 MAP3K10Q02779 954 aa14.61□□□□□ -0.07
CACNA1C-228ENST00000492150 CCDC129Q6ZRS4 1044 aa14.61□□□□□ -0.07
CACNA1C-228ENST00000492150 ZFPM1Q8IX07 1006 aa14.61□□□□□ -0.07
CACNA1C-228ENST00000492150 ASCC2Q9H1I8 757 aaPredicted RBP14.61□□□□□ -0.07
CACNA1C-228ENST00000492150 PRRC2BQ5JSZ5 2229 aaKnown RBP14.61□□□□□ -0.07
CACNA1C-228ENST00000492150 EYA2O00167 538 aa14.6□□□□□ -0.07
CACNA1C-228ENST00000492150 CTNND1O60716 968 aaKnown RBP14.6□□□□□ -0.07
CACNA1C-228ENST00000492150 SLC5A1P13866 664 aa14.6□□□□□ -0.07
CACNA1C-228ENST00000492150 POU3F3P20264 500 aaPredicted RBP14.6□□□□□ -0.07
CACNA1C-228ENST00000492150 PRDX5P30044 214 aa14.6□□□□□ -0.07
CACNA1C-228ENST00000492150 MFSD14CQ5VZR4 134 aa14.6□□□□□ -0.07
CACNA1C-228ENST00000492150 ATG9AQ7Z3C6 839 aa14.6□□□□□ -0.07
CACNA1C-228ENST00000492150 LPIN2Q92539 896 aa14.6□□□□□ -0.07
CACNA1C-228ENST00000492150 USP40Q9NVE5 1235 aa14.6□□□□□ -0.07
CACNA1C-228ENST00000492150 CACNA1BQ00975 2339 aa14.6□□□□□ -0.07
CACNA1C-228ENST00000492150 TRANK1O15050 2925 aa14.59□□□□□ -0.07
CACNA1C-228ENST00000492150 TLE2Q04725 743 aa14.59□□□□□ -0.07
CACNA1C-228ENST00000492150 GJC2Q5T442 439 aaPredicted RBP14.59□□□□□ -0.07
CACNA1C-228ENST00000492150 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.59□□□□□ -0.07
CACNA1C-228ENST00000492150 TBC1D2Q9BYX2 928 aa14.59□□□□□ -0.07
CACNA1C-228ENST00000492150 MSRAQ9UJ68 235 aa14.59□□□□□ -0.07
CACNA1C-228ENST00000492150 SPTBN4Q9H254 2564 aa14.58□□□□□ -0.08
CACNA1C-228ENST00000492150 ZEB1P37275 1124 aaPredicted RBP14.58□□□□□ -0.08
CACNA1C-228ENST00000492150 CCDC174Q6PII3 467 aa14.58□□□□□ -0.08
CACNA1C-228ENST00000492150 GPR142Q7Z601 462 aa14.58□□□□□ -0.08
CACNA1C-228ENST00000492150 GPRC5AQ8NFJ5 357 aa14.58□□□□□ -0.08
CACNA1C-228ENST00000492150 PTPRCP08575 1304 aa14.58□□□□□ -0.08
CACNA1C-228ENST00000492150 MYH13Q9UKX3 1938 aa14.57□□□□□ -0.08
CACNA1C-228ENST00000492150 GRXCR1A8MXD5 290 aa14.57□□□□□ -0.08
CACNA1C-228ENST00000492150 LDHBP07195 334 aaKnown RBP14.57□□□□□ -0.08
CACNA1C-228ENST00000492150 ALADP13716 330 aa14.57□□□□□ -0.08
CACNA1C-228ENST00000492150 MAP2K5Q13163 448 aa14.57□□□□□ -0.08
CACNA1C-228ENST00000492150 SKIV2LQ15477 1246 aaKnown RBP14.57□□□□□ -0.08
CACNA1C-228ENST00000492150 CSPP1Q1MSJ5 1256 aa14.57□□□□□ -0.08
CACNA1C-228ENST00000492150 SH3BP5LQ7L8J4 393 aa14.57□□□□□ -0.08
CACNA1C-228ENST00000492150 UIMC1Q96RL1 719 aa14.57□□□□□ -0.08
CACNA1C-228ENST00000492150 SLC28A3Q9HAS3 691 aa14.57□□□□□ -0.08
CACNA1C-228ENST00000492150 CD320Q9NPF0 282 aa14.57□□□□□ -0.08
CACNA1C-228ENST00000492150 LRRFIP2Q9Y608 721 aaKnown RBP14.57□□□□□ -0.08
CACNA1C-228ENST00000492150 ZNF521Q96K83 1311 aa14.57□□□□□ -0.08
CACNA1C-228ENST00000492150 SALL1Q9NSC2 1324 aa14.57□□□□□ -0.08
CACNA1C-228ENST00000492150 A0A0G2JMZ2 1700 aa14.57□□□□□ -0.08
CACNA1C-228ENST00000492150 ATAD5Q96QE3 1844 aa14.57□□□□□ -0.08
CACNA1C-228ENST00000492150 SLURP2P0DP57 97 aa14.56□□□□□ -0.08
CACNA1C-228ENST00000492150 RGS3P49796 1198 aa14.56□□□□□ -0.08
CACNA1C-228ENST00000492150 SH3D19Q5HYK7 790 aa14.56□□□□□ -0.08
CACNA1C-228ENST00000492150 ERMP1Q7Z2K6 904 aa14.56□□□□□ -0.08
CACNA1C-228ENST00000492150 PLEKHH3Q7Z736 793 aa14.56□□□□□ -0.08
CACNA1C-228ENST00000492150 MICALL1Q8N3F8 863 aa14.56□□□□□ -0.08
CACNA1C-228ENST00000492150 SSH1Q8WYL5 1049 aa14.56□□□□□ -0.08
CACNA1C-228ENST00000492150 IDI2Q9BXS1 227 aa14.56□□□□□ -0.08
CACNA1C-228ENST00000492150 TXNRD2Q9NNW7 524 aa14.56□□□□□ -0.08
CACNA1C-228ENST00000492150 ENTPD3O75355 529 aa14.55□□□□□ -0.08
CACNA1C-228ENST00000492150 IGHA2P01877 340 aa14.55□□□□□ -0.08
CACNA1C-228ENST00000492150 CNGA1P29973 690 aa14.55□□□□□ -0.08
CACNA1C-228ENST00000492150 PHKA1P46020 1223 aa14.55□□□□□ -0.08
CACNA1C-228ENST00000492150 ATP2B3Q16720 1220 aa14.55□□□□□ -0.08
CACNA1C-228ENST00000492150 TMEM240Q5SV17 173 aa14.55□□□□□ -0.08
CACNA1C-228ENST00000492150 FAM9BQ8IZU0 186 aa14.55□□□□□ -0.08
CACNA1C-228ENST00000492150 EDC3Q96F86 508 aaKnown RBP14.55□□□□□ -0.08
CACNA1C-228ENST00000492150 GNL3LQ9NVN8 582 aaKnown RBP14.55□□□□□ -0.08
CACNA1C-228ENST00000492150 FLRT1Q9NZU1 646 aa14.55□□□□□ -0.08
CACNA1C-228ENST00000492150 RFX7Q2KHR2 1363 aa14.55□□□□□ -0.08
CACNA1C-228ENST00000492150 C5orf42Q9H799 3197 aa14.55□□□□□ -0.08
CACNA1C-228ENST00000492150 DDTLA6NHG4 134 aaPredicted RBP14.54□□□□□ -0.08
CACNA1C-228ENST00000492150 ANP32CO43423 234 aa14.54□□□□□ -0.08
CACNA1C-228ENST00000492150 HOXC6P09630 235 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms