RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 GDF11O95390 407 aa18.22■□□□□ 0.51
SS18L1-204ENST00000491916 GNAT2P19087 354 aa18.22■□□□□ 0.51
SS18L1-204ENST00000491916 GUCY1A2P33402 732 aa18.22■□□□□ 0.51
SS18L1-204ENST00000491916 CTCFP49711 727 aaPredicted RBP18.22■□□□□ 0.51
SS18L1-204ENST00000491916 LBX1P52954 281 aa18.22■□□□□ 0.51
SS18L1-204ENST00000491916 VPS53Q5VIR6 699 aa18.22■□□□□ 0.51
SS18L1-204ENST00000491916 ZNF589Q86UQ0 364 aaPredicted RBP18.22■□□□□ 0.51
SS18L1-204ENST00000491916 CFHR5Q9BXR6 569 aa18.22■□□□□ 0.51
SS18L1-204ENST00000491916 PICK1Q9NRD5 415 aa18.22■□□□□ 0.51
SS18L1-204ENST00000491916 CCL15-CCL14A0A0B4J2E2 113 aa18.21■□□□□ 0.51
SS18L1-204ENST00000491916 SNAPC2Q13487 334 aa18.21■□□□□ 0.51
SS18L1-204ENST00000491916 CCL15Q16663 113 aa18.21■□□□□ 0.51
SS18L1-204ENST00000491916 MCMDC2Q4G0Z9 681 aa18.21■□□□□ 0.51
SS18L1-204ENST00000491916 IFNL3Q8IZI9 196 aa18.21■□□□□ 0.51
SS18L1-204ENST00000491916 FAM43AQ8N2R8 423 aa18.21■□□□□ 0.51
SS18L1-204ENST00000491916 A0A0G2JLL6 359 aaPredicted RBP18.2■□□□□ 0.5
SS18L1-204ENST00000491916 BTBD19C9JJ37 291 aa18.2■□□□□ 0.5
SS18L1-204ENST00000491916 CETPP11597 493 aa18.2■□□□□ 0.5
SS18L1-204ENST00000491916 GPAT2Q6NUI2 795 aa18.2■□□□□ 0.5
SS18L1-204ENST00000491916 C16orf86Q6ZW13 317 aa18.2■□□□□ 0.5
SS18L1-204ENST00000491916 PRRT2Q7Z6L0 340 aaPredicted RBP18.2■□□□□ 0.5
SS18L1-204ENST00000491916 CCDC136Q96JN2 1154 aa18.2■□□□□ 0.5
SS18L1-204ENST00000491916 BEGAINQ9BUH8 593 aa18.2■□□□□ 0.5
SS18L1-204ENST00000491916 IL25Q9H293 177 aa18.2■□□□□ 0.5
SS18L1-204ENST00000491916 ZBTB21Q9ULJ3 1066 aa18.2■□□□□ 0.5
SS18L1-204ENST00000491916 USP17L5A8MUK1 530 aa18.19■□□□□ 0.5
SS18L1-204ENST00000491916 TBC1D8O95759 1140 aa18.19■□□□□ 0.5
SS18L1-204ENST00000491916 GH2P01242 217 aa18.19■□□□□ 0.5
SS18L1-204ENST00000491916 NEFLP07196 543 aa18.19■□□□□ 0.5
SS18L1-204ENST00000491916 ASNSP08243 561 aa18.19■□□□□ 0.5
SS18L1-204ENST00000491916 CDK8P49336 464 aa18.19■□□□□ 0.5
SS18L1-204ENST00000491916 CERKLQ49MI3 558 aaPredicted RBP18.19■□□□□ 0.5
SS18L1-204ENST00000491916 WDR18Q9BV38 432 aa18.19■□□□□ 0.5
SS18L1-204ENST00000491916 PRDM10Q9NQV6 1147 aa18.19■□□□□ 0.5
SS18L1-204ENST00000491916 GINM1Q9NU53 330 aa18.19■□□□□ 0.5
SS18L1-204ENST00000491916 ARPP21Q9UBL0 812 aaPredicted RBP18.19■□□□□ 0.5
SS18L1-204ENST00000491916 TAOK2Q9UL54 1235 aa18.19■□□□□ 0.5
SS18L1-204ENST00000491916 CASP8AP2Q9UKL3 1982 aa18.19■□□□□ 0.5
SS18L1-204ENST00000491916 ROBO3Q96MS0 1386 aa18.18■□□□□ 0.5
SS18L1-204ENST00000491916 ALX1Q15699 326 aa18.18■□□□□ 0.5
SS18L1-204ENST00000491916 ERICH6BQ5W0A0 696 aa18.18■□□□□ 0.5
SS18L1-204ENST00000491916 ZNF280CQ8ND82 737 aa18.18■□□□□ 0.5
SS18L1-204ENST00000491916 TRIM34Q9BYJ4 488 aa18.18■□□□□ 0.5
SS18L1-204ENST00000491916 SWAP70Q9UH65 585 aa18.18■□□□□ 0.5
SS18L1-204ENST00000491916 TACC3Q9Y6A5 838 aa18.18■□□□□ 0.5
SS18L1-204ENST00000491916 TRIM75PA6NK02 468 aa18.17■□□□□ 0.5
SS18L1-204ENST00000491916 SPP2Q13103 211 aa18.17■□□□□ 0.5
SS18L1-204ENST00000491916 DGKZQ13574 1117 aa18.17■□□□□ 0.5
SS18L1-204ENST00000491916 COL13A1Q5TAT6 717 aaPredicted RBP18.17■□□□□ 0.5
SS18L1-204ENST00000491916 HTTP42858 3142 aa18.16■□□□□ 0.5
SS18L1-204ENST00000491916 ALDH1A1P00352 501 aa18.16■□□□□ 0.5
SS18L1-204ENST00000491916 APPP05067 770 aa18.16■□□□□ 0.5
SS18L1-204ENST00000491916 HSPD1P10809 573 aaKnown RBP18.16■□□□□ 0.5
SS18L1-204ENST00000491916 AKR1B1P15121 316 aa18.16■□□□□ 0.5
SS18L1-204ENST00000491916 CRHR2Q13324 411 aa18.16■□□□□ 0.5
SS18L1-204ENST00000491916 ABCB5Q2M3G0 1257 aa18.16■□□□□ 0.5
SS18L1-204ENST00000491916 SH3D19Q5HYK7 790 aa18.16■□□□□ 0.5
SS18L1-204ENST00000491916 CWC27Q6UX04 472 aaKnown RBP18.16■□□□□ 0.5
SS18L1-204ENST00000491916 ANKRD23Q86SG2 305 aa18.16■□□□□ 0.5
SS18L1-204ENST00000491916 SIAH1Q8IUQ4 282 aa18.16■□□□□ 0.5
SS18L1-204ENST00000491916 DDRGK1Q96HY6 314 aa18.16■□□□□ 0.5
SS18L1-204ENST00000491916 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.16■□□□□ 0.5
SS18L1-204ENST00000491916 TBC1D2Q9BYX2 928 aa18.16■□□□□ 0.5
SS18L1-204ENST00000491916 ZCCHC17Q9NP64 241 aaKnown RBP18.16■□□□□ 0.5
SS18L1-204ENST00000491916 CCDC171Q6TFL3 1326 aa18.16■□□□□ 0.5
SS18L1-204ENST00000491916 LOC285556D6RIA3 1793 aa18.15■□□□□ 0.5
SS18L1-204ENST00000491916 MINDY4BA8MYZ0 360 aa18.15■□□□□ 0.5
SS18L1-204ENST00000491916 FGAP02671 866 aa18.15■□□□□ 0.5
SS18L1-204ENST00000491916 CHMLP26374 656 aa18.15■□□□□ 0.5
SS18L1-204ENST00000491916 TDO2P48775 406 aa18.15■□□□□ 0.5
SS18L1-204ENST00000491916 SEPT2Q15019 361 aa18.15■□□□□ 0.5
SS18L1-204ENST00000491916 NOM1Q5C9Z4 860 aaKnown RBP18.15■□□□□ 0.5
SS18L1-204ENST00000491916 MYH8P13535 1937 aa18.15■□□□□ 0.5
SS18L1-204ENST00000491916 GREB1LQ9C091 1923 aaPredicted RBP18.15■□□□□ 0.5
SS18L1-204ENST00000491916 HIP1O00291 1037 aa18.14■□□□□ 0.49
SS18L1-204ENST00000491916 RASA1P20936 1047 aa18.14■□□□□ 0.49
SS18L1-204ENST00000491916 BACE1P56817 501 aa18.14■□□□□ 0.49
SS18L1-204ENST00000491916 TREML2Q5T2D2 321 aa18.14■□□□□ 0.49
SS18L1-204ENST00000491916 OTUD7BQ6GQQ9 843 aa18.14■□□□□ 0.49
SS18L1-204ENST00000491916 ACER1Q8TDN7 264 aa18.14■□□□□ 0.49
SS18L1-204ENST00000491916 NACAP1Q9BZK3 213 aa18.14■□□□□ 0.49
SS18L1-204ENST00000491916 NAPBQ9H115 298 aa18.14■□□□□ 0.49
SS18L1-204ENST00000491916 PPP4R2Q9NY27 417 aa18.14■□□□□ 0.49
SS18L1-204ENST00000491916 ADGRA2Q96PE1 1338 aa18.14■□□□□ 0.49
SS18L1-204ENST00000491916 A0A1W2PRG0 241 aa18.13■□□□□ 0.49
SS18L1-204ENST00000491916 GPR25O00155 361 aa18.13■□□□□ 0.49
SS18L1-204ENST00000491916 PDHXO00330 501 aa18.13■□□□□ 0.49
SS18L1-204ENST00000491916 HMGCS2P54868 508 aa18.13■□□□□ 0.49
SS18L1-204ENST00000491916 CAP1Q01518 475 aa18.13■□□□□ 0.49
SS18L1-204ENST00000491916 PPARAQ07869 468 aa18.13■□□□□ 0.49
SS18L1-204ENST00000491916 MTMR2Q13614 643 aa18.13■□□□□ 0.49
SS18L1-204ENST00000491916 FASTKD5Q7L8L6 764 aaKnown RBP18.13■□□□□ 0.49
SS18L1-204ENST00000491916 AMOTL1Q8IY63 956 aa18.13■□□□□ 0.49
SS18L1-204ENST00000491916 STK11IPQ8N1F8 1099 aa18.13■□□□□ 0.49
SS18L1-204ENST00000491916 INCENPQ9NQS7 918 aa18.13■□□□□ 0.49
SS18L1-204ENST00000491916 DIAPH3Q9NSV4 1193 aa18.13■□□□□ 0.49
SS18L1-204ENST00000491916 EMILIN3Q9NT22 766 aa18.13■□□□□ 0.49
SS18L1-204ENST00000491916 ANAPC4Q9UJX5 808 aa18.13■□□□□ 0.49
SS18L1-204ENST00000491916 RAB3GAP1Q15042 981 aa18.12■□□□□ 0.49
SS18L1-204ENST00000491916 TMEM179Q6ZVK1 233 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms