RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 MPZL3Q6UWV2 235 aa6.41□□□□□ -1.38
VTA1-204ENST00000491881 CILP2Q8IUL8 1156 aa6.41□□□□□ -1.38
VTA1-204ENST00000491881 SULF2Q8IWU5 870 aa6.41□□□□□ -1.38
VTA1-204ENST00000491881 METTL5Q9NRN9 209 aaKnown RBP6.41□□□□□ -1.38
VTA1-204ENST00000491881 IGF2BP3O00425 579 aaKnown RBP eCLIP6.4□□□□□ -1.38
VTA1-204ENST00000491881 LDLRAD1Q5T700 205 aa6.4□□□□□ -1.38
VTA1-204ENST00000491881 MAP1SQ66K74 1059 aaPredicted RBP6.4□□□□□ -1.38
VTA1-204ENST00000491881 SYDE1Q6ZW31 735 aaPredicted RBP6.4□□□□□ -1.38
VTA1-204ENST00000491881 SV2BQ7L1I2 683 aa6.4□□□□□ -1.38
VTA1-204ENST00000491881 HS2ST1Q7LGA3 356 aa6.4□□□□□ -1.38
VTA1-204ENST00000491881 ANKLE2Q86XL3 938 aa6.4□□□□□ -1.38
VTA1-204ENST00000491881 SPACA3Q8IXA5 215 aa6.4□□□□□ -1.38
VTA1-204ENST00000491881 LRRC56Q8IYG6 542 aaPredicted RBP6.4□□□□□ -1.38
VTA1-204ENST00000491881 ANKRD24Q8TF21 1146 aa6.4□□□□□ -1.38
VTA1-204ENST00000491881 RNF34Q969K3 372 aa6.4□□□□□ -1.38
VTA1-204ENST00000491881 ACSBG1Q96GR2 724 aa6.4□□□□□ -1.38
VTA1-204ENST00000491881 NOC4LQ9BVI4 516 aaKnown RBP6.4□□□□□ -1.38
VTA1-204ENST00000491881 PRDM10Q9NQV6 1147 aa6.4□□□□□ -1.38
VTA1-204ENST00000491881 SAMM50Q9Y512 469 aa6.4□□□□□ -1.38
VTA1-204ENST00000491881 GNAT3A8MTJ3 354 aa6.39□□□□□ -1.39
VTA1-204ENST00000491881 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.39□□□□□ -1.39
VTA1-204ENST00000491881 GLI1P08151 1106 aa6.39□□□□□ -1.39
VTA1-204ENST00000491881 FANCCQ00597 558 aa6.39□□□□□ -1.39
VTA1-204ENST00000491881 FYB2Q5VWT5 728 aa6.39□□□□□ -1.39
VTA1-204ENST00000491881 FAM214BQ7L5A3 538 aa6.39□□□□□ -1.39
VTA1-204ENST00000491881 NECAB3Q96P71 396 aaPredicted RBP6.39□□□□□ -1.39
VTA1-204ENST00000491881 GGT7Q9UJ14 662 aa6.39□□□□□ -1.39
VTA1-204ENST00000491881 ENC1O14682 589 aa6.38□□□□□ -1.39
VTA1-204ENST00000491881 CELA3AP09093 270 aa6.38□□□□□ -1.39
VTA1-204ENST00000491881 RLBP1P12271 317 aa6.38□□□□□ -1.39
VTA1-204ENST00000491881 LMNB1P20700 586 aa6.38□□□□□ -1.39
VTA1-204ENST00000491881 ARNTP27540 789 aa6.38□□□□□ -1.39
VTA1-204ENST00000491881 CLCN7P51798 805 aa6.38□□□□□ -1.39
VTA1-204ENST00000491881 MAP3K11Q16584 847 aa6.38□□□□□ -1.39
VTA1-204ENST00000491881 NKPD1Q17RQ9 610 aa6.38□□□□□ -1.39
VTA1-204ENST00000491881 LILRA6Q6PI73 481 aa6.38□□□□□ -1.39
VTA1-204ENST00000491881 PRR23BQ6ZRT6 265 aa6.38□□□□□ -1.39
VTA1-204ENST00000491881 C1QL4Q86Z23 238 aa6.38□□□□□ -1.39
VTA1-204ENST00000491881 STK35Q8TDR2 534 aa6.38□□□□□ -1.39
VTA1-204ENST00000491881 GPBAR1Q8TDU6 330 aa6.38□□□□□ -1.39
VTA1-204ENST00000491881 KIRREL1Q96J84 757 aa6.38□□□□□ -1.39
VTA1-204ENST00000491881 EMILIN2Q9BXX0 1053 aa6.38□□□□□ -1.39
VTA1-204ENST00000491881 PICK1Q9NRD5 415 aa6.38□□□□□ -1.39
VTA1-204ENST00000491881 PITPNM2Q9BZ72 1349 aa6.37□□□□□ -1.39
VTA1-204ENST00000491881 ZSCAN22P10073 491 aaPredicted RBP6.37□□□□□ -1.39
VTA1-204ENST00000491881 HDLBPQ00341 1268 aaKnown RBP6.37□□□□□ -1.39
VTA1-204ENST00000491881 TMEM67Q5HYA8 995 aa6.37□□□□□ -1.39
VTA1-204ENST00000491881 LCNL1Q6ZST4 164 aa6.37□□□□□ -1.39
VTA1-204ENST00000491881 CYFIP1Q7L576 1253 aa6.37□□□□□ -1.39
VTA1-204ENST00000491881 SIAH1Q8IUQ4 282 aa6.37□□□□□ -1.39
VTA1-204ENST00000491881 CBX8Q9HC52 389 aa6.37□□□□□ -1.39
VTA1-204ENST00000491881 NME2P22392 152 aa6.36□□□□□ -1.39
VTA1-204ENST00000491881 PWP1Q13610 501 aa6.36□□□□□ -1.39
VTA1-204ENST00000491881 PPM1JQ5JR12 505 aa6.36□□□□□ -1.39
VTA1-204ENST00000491881 C9orf131Q5VYM1 1079 aa6.36□□□□□ -1.39
VTA1-204ENST00000491881 PCNX4Q63HM2 1172 aa6.36□□□□□ -1.39
VTA1-204ENST00000491881 TTBK2Q6IQ55 1244 aa6.36□□□□□ -1.39
VTA1-204ENST00000491881 NT5DC4Q86YG4 428 aa6.36□□□□□ -1.39
VTA1-204ENST00000491881 CARS2Q9HA77 564 aaKnown RBP6.36□□□□□ -1.39
VTA1-204ENST00000491881 PRDM5Q9NQX1 630 aaPredicted RBP6.36□□□□□ -1.39
VTA1-204ENST00000491881 LMCD1Q9NZU5 365 aa6.36□□□□□ -1.39
VTA1-204ENST00000491881 CSADQ9Y600 493 aa6.36□□□□□ -1.39
VTA1-204ENST00000491881 NFIBO00712 420 aa6.35□□□□□ -1.39
VTA1-204ENST00000491881 PAGE1O75459 146 aa6.35□□□□□ -1.39
VTA1-204ENST00000491881 ERCC5P28715 1186 aaPredicted RBP6.35□□□□□ -1.39
VTA1-204ENST00000491881 LIG3P49916 1009 aa6.35□□□□□ -1.39
VTA1-204ENST00000491881 USP48Q86UV5 1035 aa6.35□□□□□ -1.39
VTA1-204ENST00000491881 RELL1Q8IUW5 271 aa6.35□□□□□ -1.39
VTA1-204ENST00000491881 FOXQ1Q9C009 403 aa6.35□□□□□ -1.39
VTA1-204ENST00000491881 F6X3S4 739 aa6.34□□□□□ -1.39
VTA1-204ENST00000491881 C1QTNF9P0C862 333 aa6.34□□□□□ -1.39
VTA1-204ENST00000491881 GBP2P32456 591 aaPredicted RBP6.34□□□□□ -1.39
VTA1-204ENST00000491881 ZNF252P-AS1Q0IIN9 211 aa6.34□□□□□ -1.39
VTA1-204ENST00000491881 LRRC14Q15048 493 aa6.34□□□□□ -1.39
VTA1-204ENST00000491881 CDC37L1Q7L3B6 337 aa6.34□□□□□ -1.39
VTA1-204ENST00000491881 ERMP1Q7Z2K6 904 aa6.34□□□□□ -1.39
VTA1-204ENST00000491881 FBXO15Q8NCQ5 510 aaPredicted RBP6.34□□□□□ -1.39
VTA1-204ENST00000491881 DIRC2Q96SL1 478 aa6.34□□□□□ -1.39
VTA1-204ENST00000491881 KRTAP4-5Q9BYR2 181 aa6.34□□□□□ -1.39
VTA1-204ENST00000491881 IGSF5Q9NSI5 407 aa6.34□□□□□ -1.39
VTA1-204ENST00000491881 KBTBD4Q9NVX7 518 aa6.34□□□□□ -1.39
VTA1-204ENST00000491881 MAPK8IP1Q9UQF2 711 aa6.34□□□□□ -1.39
VTA1-204ENST00000491881 NCANO14594 1321 aa6.33□□□□□ -1.4
VTA1-204ENST00000491881 DCDC2CA8MYV0 355 aa6.33□□□□□ -1.4
VTA1-204ENST00000491881 FAM155AB1AL88 458 aaPredicted RBP6.33□□□□□ -1.4
VTA1-204ENST00000491881 EOMESO95936 686 aa6.33□□□□□ -1.4
VTA1-204ENST00000491881 NTF4P34130 210 aa6.33□□□□□ -1.4
VTA1-204ENST00000491881 RPS26P62854 115 aaKnown RBP6.33□□□□□ -1.4
VTA1-204ENST00000491881 ZNF394Q53GI3 561 aa6.33□□□□□ -1.4
VTA1-204ENST00000491881 DIEXFQ68CQ4 756 aaKnown RBP6.33□□□□□ -1.4
VTA1-204ENST00000491881 LLGL2Q6P1M3 1020 aa6.33□□□□□ -1.4
VTA1-204ENST00000491881 UBE3DQ7Z6J8 389 aa6.33□□□□□ -1.4
VTA1-204ENST00000491881 METTL16Q86W50 562 aaKnown RBP6.33□□□□□ -1.4
VTA1-204ENST00000491881 C12orf40Q86WS4 652 aa6.33□□□□□ -1.4
VTA1-204ENST00000491881 TMEM74Q96NL1 305 aa6.33□□□□□ -1.4
VTA1-204ENST00000491881 RSRP1Q9BUV0 290 aa6.33□□□□□ -1.4
VTA1-204ENST00000491881 NSUN3Q9H649 340 aaKnown RBP6.33□□□□□ -1.4
VTA1-204ENST00000491881 CCSER2Q9H7U1 834 aa6.33□□□□□ -1.4
VTA1-204ENST00000491881 COPRSQ9NQ92 184 aa6.33□□□□□ -1.4
VTA1-204ENST00000491881 PCDHGB7Q9Y5F8 929 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms