RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 PAGR1Q9BTK6 254 aa17.22■□□□□ 0.35
ATG4B-222ENST00000491867 WDR18Q9BV38 432 aa17.22■□□□□ 0.35
ATG4B-222ENST00000491867 SIL1Q9H173 461 aa17.22■□□□□ 0.35
ATG4B-222ENST00000491867 DDX20Q9UHI6 824 aaKnown RBP17.22■□□□□ 0.35
ATG4B-222ENST00000491867 LTBP2Q14767 1821 aa17.21■□□□□ 0.35
ATG4B-222ENST00000491867 GPR75-ASB3A0A0A6YYF3 556 aa17.21■□□□□ 0.35
ATG4B-222ENST00000491867 DNM1LO00429 736 aa17.21■□□□□ 0.35
ATG4B-222ENST00000491867 CNGA1P29973 690 aa17.21■□□□□ 0.35
ATG4B-222ENST00000491867 ADORA1P30542 326 aa17.21■□□□□ 0.35
ATG4B-222ENST00000491867 MAP2K5Q13163 448 aa17.21■□□□□ 0.35
ATG4B-222ENST00000491867 RASGRF1Q13972 1273 aa17.21■□□□□ 0.35
ATG4B-222ENST00000491867 SPTY2D1Q68D10 685 aaPredicted RBP17.21■□□□□ 0.35
ATG4B-222ENST00000491867 CCDC102BQ68D86 513 aa17.21■□□□□ 0.35
ATG4B-222ENST00000491867 LPAR1Q92633 364 aa17.21■□□□□ 0.35
ATG4B-222ENST00000491867 BADQ92934 168 aa17.21■□□□□ 0.35
ATG4B-222ENST00000491867 USP44Q9H0E7 712 aa17.21■□□□□ 0.35
ATG4B-222ENST00000491867 CWC22Q9HCG8 908 aaKnown RBP17.21■□□□□ 0.35
ATG4B-222ENST00000491867 PRDM5Q9NQX1 630 aaPredicted RBP17.21■□□□□ 0.35
ATG4B-222ENST00000491867 FLRT1Q9NZU1 646 aa17.21■□□□□ 0.35
ATG4B-222ENST00000491867 ATAD5Q96QE3 1844 aa17.2■□□□□ 0.34
ATG4B-222ENST00000491867 ZBTB22O15209 634 aa17.2■□□□□ 0.34
ATG4B-222ENST00000491867 PLA2G5P39877 138 aa17.2■□□□□ 0.34
ATG4B-222ENST00000491867 MECOMQ03112 1051 aa17.2■□□□□ 0.34
ATG4B-222ENST00000491867 POTEEQ6S8J3 1075 aa17.2■□□□□ 0.34
ATG4B-222ENST00000491867 EDC3Q96F86 508 aaKnown RBP17.2■□□□□ 0.34
ATG4B-222ENST00000491867 MRS2Q9HD23 443 aa17.2■□□□□ 0.34
ATG4B-222ENST00000491867 NDUFB9Q9Y6M9 179 aa17.2■□□□□ 0.34
ATG4B-222ENST00000491867 FRMPD3Q5JV73 1810 aa17.19■□□□□ 0.34
ATG4B-222ENST00000491867 MSCO60682 206 aa17.19■□□□□ 0.34
ATG4B-222ENST00000491867 ZNF384Q8TF68 577 aa17.19■□□□□ 0.34
ATG4B-222ENST00000491867 CHD9Q3L8U1 2897 aa17.18■□□□□ 0.34
ATG4B-222ENST00000491867 CIAO1O76071 339 aa17.18■□□□□ 0.34
ATG4B-222ENST00000491867 JAG1P78504 1218 aa17.18■□□□□ 0.34
ATG4B-222ENST00000491867 GJC2Q5T442 439 aaPredicted RBP17.18■□□□□ 0.34
ATG4B-222ENST00000491867 SLC39A5Q6ZMH5 540 aa17.18■□□□□ 0.34
ATG4B-222ENST00000491867 HERC5Q9UII4 1024 aaKnown RBP17.18■□□□□ 0.34
ATG4B-222ENST00000491867 TMEM265A0A087WTH1 108 aa17.17■□□□□ 0.34
ATG4B-222ENST00000491867 C19orf81C9J6K1 198 aa17.17■□□□□ 0.34
ATG4B-222ENST00000491867 GLRX3O76003 335 aaKnown RBP17.17■□□□□ 0.34
ATG4B-222ENST00000491867 ASNSP08243 561 aa17.17■□□□□ 0.34
ATG4B-222ENST00000491867 ATP2B2Q01814 1243 aa17.17■□□□□ 0.34
ATG4B-222ENST00000491867 GRIN2CQ14957 1233 aa17.17■□□□□ 0.34
ATG4B-222ENST00000491867 TRIM60Q495X7 471 aa17.17■□□□□ 0.34
ATG4B-222ENST00000491867 ERICH6Q7L0X2 663 aa17.17■□□□□ 0.34
ATG4B-222ENST00000491867 TRPV1Q8NER1 839 aa17.17■□□□□ 0.34
ATG4B-222ENST00000491867 GTF3C2Q8WUA4 911 aaPredicted RBP17.17■□□□□ 0.34
ATG4B-222ENST00000491867 FAM122AQ96E09 287 aa17.17■□□□□ 0.34
ATG4B-222ENST00000491867 PDS5AQ29RF7 1337 aaKnown RBP17.17■□□□□ 0.34
ATG4B-222ENST00000491867 USP17L10C9JJH3 530 aa17.16■□□□□ 0.34
ATG4B-222ENST00000491867 CYP2C19P33261 490 aa17.16■□□□□ 0.34
ATG4B-222ENST00000491867 SHROOM1Q2M3G4 852 aaPredicted RBP17.16■□□□□ 0.34
ATG4B-222ENST00000491867 WDR78Q5VTH9 848 aa17.16■□□□□ 0.34
ATG4B-222ENST00000491867 SH3RF1Q7Z6J0 888 aa17.16■□□□□ 0.34
ATG4B-222ENST00000491867 RNPC3Q96LT9 517 aaKnown RBP17.16■□□□□ 0.34
ATG4B-222ENST00000491867 PDLIM7Q9NR12 457 aa17.16■□□□□ 0.34
ATG4B-222ENST00000491867 FBXO3Q9UK99 471 aa17.16■□□□□ 0.34
ATG4B-222ENST00000491867 TRIM43BA6NCK2 446 aa17.15■□□□□ 0.34
ATG4B-222ENST00000491867 SLC15A5A6NIM6 579 aa17.15■□□□□ 0.34
ATG4B-222ENST00000491867 MAP4K4O95819 1239 aaPredicted RBP17.15■□□□□ 0.34
ATG4B-222ENST00000491867 TEX11Q8IYF3 940 aa17.15■□□□□ 0.34
ATG4B-222ENST00000491867 ARRDC4Q8NCT1 418 aa17.15■□□□□ 0.34
ATG4B-222ENST00000491867 TRIM43Q96BQ3 446 aaPredicted RBP17.15■□□□□ 0.34
ATG4B-222ENST00000491867 EMILIN3Q9NT22 766 aa17.15■□□□□ 0.34
ATG4B-222ENST00000491867 PI4KBQ9UBF8 816 aa17.15■□□□□ 0.34
ATG4B-222ENST00000491867 RABGAP1Q9Y3P9 1069 aa17.15■□□□□ 0.34
ATG4B-222ENST00000491867 RLFQ13129 1914 aa17.15■□□□□ 0.34
ATG4B-222ENST00000491867 KBTBD13C9JR72 458 aa17.14■□□□□ 0.33
ATG4B-222ENST00000491867 CNMDO75829 334 aa17.14■□□□□ 0.33
ATG4B-222ENST00000491867 MYCNP04198 464 aaPredicted RBP17.14■□□□□ 0.33
ATG4B-222ENST00000491867 LDHCP07864 332 aa17.14■□□□□ 0.33
ATG4B-222ENST00000491867 PTPREP23469 700 aa17.14■□□□□ 0.33
ATG4B-222ENST00000491867 IL15P40933 162 aaPredicted RBP17.14■□□□□ 0.33
ATG4B-222ENST00000491867 TIMM10P62072 90 aa17.14■□□□□ 0.33
ATG4B-222ENST00000491867 CCNA1P78396 465 aa17.14■□□□□ 0.33
ATG4B-222ENST00000491867 ANP32CO43423 234 aa17.13■□□□□ 0.33
ATG4B-222ENST00000491867 GDF11O95390 407 aa17.13■□□□□ 0.33
ATG4B-222ENST00000491867 HOXC6P09630 235 aa17.13■□□□□ 0.33
ATG4B-222ENST00000491867 EPHB4P54760 987 aa17.13■□□□□ 0.33
ATG4B-222ENST00000491867 GSTO1P78417 241 aa17.13■□□□□ 0.33
ATG4B-222ENST00000491867 SNX17Q15036 470 aa17.13■□□□□ 0.33
ATG4B-222ENST00000491867 ANO1Q5XXA6 986 aa17.13■□□□□ 0.33
ATG4B-222ENST00000491867 MRPL50Q8N5N7 158 aaKnown RBP17.13■□□□□ 0.33
ATG4B-222ENST00000491867 NPLOC4Q8TAT6 608 aa17.13■□□□□ 0.33
ATG4B-222ENST00000491867 PA2G4Q9UQ80 394 aaKnown RBP17.13■□□□□ 0.33
ATG4B-222ENST00000491867 CYBAP13498 195 aa17.12■□□□□ 0.33
ATG4B-222ENST00000491867 DNAJB2P25686 324 aa17.12■□□□□ 0.33
ATG4B-222ENST00000491867 ADCYAP1R1P41586 468 aa17.12■□□□□ 0.33
ATG4B-222ENST00000491867 USP17L2Q6R6M4 530 aa17.12■□□□□ 0.33
ATG4B-222ENST00000491867 TBC1D9Q6ZT07 1266 aa17.12■□□□□ 0.33
ATG4B-222ENST00000491867 SH3RF3Q8TEJ3 882 aaPredicted RBP17.12■□□□□ 0.33
ATG4B-222ENST00000491867 PPM1EQ8WY54 764 aa17.12■□□□□ 0.33
ATG4B-222ENST00000491867 FERMT2Q96AC1 680 aa17.12■□□□□ 0.33
ATG4B-222ENST00000491867 NSUN4Q96CB9 384 aaKnown RBP17.12■□□□□ 0.33
ATG4B-222ENST00000491867 DNAJC18Q9H819 358 aa17.12■□□□□ 0.33
ATG4B-222ENST00000491867 ZBTB21Q9ULJ3 1066 aa17.12■□□□□ 0.33
ATG4B-222ENST00000491867 IVNS1ABPQ9Y6Y0 642 aa17.12■□□□□ 0.33
ATG4B-222ENST00000491867 PTPRCP08575 1304 aa17.12■□□□□ 0.33
ATG4B-222ENST00000491867 ITGB8P26012 769 aa17.11■□□□□ 0.33
ATG4B-222ENST00000491867 TLE2Q04725 743 aa17.11■□□□□ 0.33
ATG4B-222ENST00000491867 MAP3K12Q12852 859 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms