RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 HERC5Q9UII4 1024 aaKnown RBP13.41□□□□□ -0.26
TMEM39A-211ENST00000491685 COL6A3P12111 3177 aa13.41□□□□□ -0.26
TMEM39A-211ENST00000491685 TNPO2O14787 897 aaKnown RBP13.4□□□□□ -0.26
TMEM39A-211ENST00000491685 IDH1O75874 414 aaKnown RBP13.4□□□□□ -0.26
TMEM39A-211ENST00000491685 BAG3O95817 575 aa13.4□□□□□ -0.26
TMEM39A-211ENST00000491685 CYP7A1P22680 504 aa13.4□□□□□ -0.26
TMEM39A-211ENST00000491685 MTMR2Q13614 643 aa13.4□□□□□ -0.26
TMEM39A-211ENST00000491685 CHRDL2Q6WN34 429 aa13.4□□□□□ -0.26
TMEM39A-211ENST00000491685 AACSQ86V21 672 aa13.4□□□□□ -0.26
TMEM39A-211ENST00000491685 METTL16Q86W50 562 aaKnown RBP13.4□□□□□ -0.26
TMEM39A-211ENST00000491685 UNC93B1Q9H1C4 597 aa13.4□□□□□ -0.26
TMEM39A-211ENST00000491685 DHX36Q9H2U1 1008 aaKnown RBP13.4□□□□□ -0.26
TMEM39A-211ENST00000491685 IL1RAPL2Q9NP60 686 aa13.4□□□□□ -0.26
TMEM39A-211ENST00000491685 PI4KBQ9UBF8 816 aa13.4□□□□□ -0.26
TMEM39A-211ENST00000491685 BAZ2AQ9UIF9 1905 aaKnown RBP13.39□□□□□ -0.27
TMEM39A-211ENST00000491685 USP17L5A8MUK1 530 aa13.39□□□□□ -0.27
TMEM39A-211ENST00000491685 ADCY3O60266 1144 aa13.39□□□□□ -0.27
TMEM39A-211ENST00000491685 INHAP05111 366 aa13.39□□□□□ -0.27
TMEM39A-211ENST00000491685 PLCG2P16885 1265 aa13.39□□□□□ -0.27
TMEM39A-211ENST00000491685 SH3D19Q5HYK7 790 aa13.39□□□□□ -0.27
TMEM39A-211ENST00000491685 UBE2Q1Q7Z7E8 422 aa13.39□□□□□ -0.27
TMEM39A-211ENST00000491685 CLASRPQ8N2M8 674 aaKnown RBP13.39□□□□□ -0.27
TMEM39A-211ENST00000491685 MAGEB6Q8N7X4 407 aa13.39□□□□□ -0.27
TMEM39A-211ENST00000491685 SLAIN1Q8ND83 568 aa13.39□□□□□ -0.27
TMEM39A-211ENST00000491685 KIF1BPQ96EK5 621 aa13.39□□□□□ -0.27
TMEM39A-211ENST00000491685 ASCC2Q9H1I8 757 aaPredicted RBP13.39□□□□□ -0.27
TMEM39A-211ENST00000491685 RBM27Q9P2N5 1060 aaKnown RBP13.39□□□□□ -0.27
TMEM39A-211ENST00000491685 FRMPD3Q5JV73 1810 aa13.39□□□□□ -0.27
TMEM39A-211ENST00000491685 DLL1O00548 723 aa13.38□□□□□ -0.27
TMEM39A-211ENST00000491685 GJA8P48165 433 aa13.38□□□□□ -0.27
TMEM39A-211ENST00000491685 IRX6P78412 446 aaPredicted RBP13.38□□□□□ -0.27
TMEM39A-211ENST00000491685 EVX2Q03828 476 aa13.38□□□□□ -0.27
TMEM39A-211ENST00000491685 FAM110CQ1W6H9 321 aa13.38□□□□□ -0.27
TMEM39A-211ENST00000491685 SIRT2Q8IXJ6 389 aa13.38□□□□□ -0.27
TMEM39A-211ENST00000491685 CRACR2BQ8N4Y2 399 aaPredicted RBP13.38□□□□□ -0.27
TMEM39A-211ENST00000491685 WDR18Q9BV38 432 aa13.38□□□□□ -0.27
TMEM39A-211ENST00000491685 RNF208Q9H0X6 261 aa13.38□□□□□ -0.27
TMEM39A-211ENST00000491685 DCTPP1Q9H773 170 aa13.38□□□□□ -0.27
TMEM39A-211ENST00000491685 BIN2Q9UBW5 565 aaPredicted RBP13.38□□□□□ -0.27
TMEM39A-211ENST00000491685 PNMA3Q9UL41 463 aa13.38□□□□□ -0.27
TMEM39A-211ENST00000491685 ZBTB21Q9ULJ3 1066 aa13.38□□□□□ -0.27
TMEM39A-211ENST00000491685 PCDHB15Q9Y5E8 787 aa13.38□□□□□ -0.27
TMEM39A-211ENST00000491685 APBB1O00213 710 aa13.37□□□□□ -0.27
TMEM39A-211ENST00000491685 GJB1P08034 283 aa13.37□□□□□ -0.27
TMEM39A-211ENST00000491685 HDAC1Q13547 482 aaPredicted RBP13.37□□□□□ -0.27
TMEM39A-211ENST00000491685 POTEEQ6S8J3 1075 aa13.37□□□□□ -0.27
TMEM39A-211ENST00000491685 RHPN1Q8TCX5 695 aa13.37□□□□□ -0.27
TMEM39A-211ENST00000491685 TBC1D2Q9BYX2 928 aa13.37□□□□□ -0.27
TMEM39A-211ENST00000491685 PRO3102Q9H379 93 aa13.37□□□□□ -0.27
TMEM39A-211ENST00000491685 AS3MTQ9HBK9 375 aa13.37□□□□□ -0.27
TMEM39A-211ENST00000491685 TAOK2Q9UL54 1235 aa13.37□□□□□ -0.27
TMEM39A-211ENST00000491685 ASNSP08243 561 aa13.36□□□□□ -0.27
TMEM39A-211ENST00000491685 BACE1P56817 501 aa13.36□□□□□ -0.27
TMEM39A-211ENST00000491685 UBXN2AP68543 259 aa13.36□□□□□ -0.27
TMEM39A-211ENST00000491685 IRF5Q13568 498 aa13.36□□□□□ -0.27
TMEM39A-211ENST00000491685 FOXP4Q8IVH2 680 aaPredicted RBP13.36□□□□□ -0.27
TMEM39A-211ENST00000491685 U2AF1L4Q8WU68 220 aaKnown RBP13.36□□□□□ -0.27
TMEM39A-211ENST00000491685 RIOK1Q9BRS2 568 aaKnown RBP13.36□□□□□ -0.27
TMEM39A-211ENST00000491685 LRRCC1Q9C099 1032 aa13.36□□□□□ -0.27
TMEM39A-211ENST00000491685 TXNRD2Q9NNW7 524 aa13.36□□□□□ -0.27
TMEM39A-211ENST00000491685 PARP14Q460N5 1801 aa13.36□□□□□ -0.27
TMEM39A-211ENST00000491685 A0A0G2JMZ2 1700 aa13.36□□□□□ -0.27
TMEM39A-211ENST00000491685 RLFQ13129 1914 aa13.35□□□□□ -0.27
TMEM39A-211ENST00000491685 GH2P01242 217 aa13.35□□□□□ -0.27
TMEM39A-211ENST00000491685 IFIT2P09913 472 aaKnown RBP13.35□□□□□ -0.27
TMEM39A-211ENST00000491685 USP5P45974 858 aa13.35□□□□□ -0.27
TMEM39A-211ENST00000491685 GCLCP48506 637 aaPredicted RBP13.35□□□□□ -0.27
TMEM39A-211ENST00000491685 TRIM32Q13049 653 aa13.35□□□□□ -0.27
TMEM39A-211ENST00000491685 SLFNL1Q499Z3 407 aa13.35□□□□□ -0.27
TMEM39A-211ENST00000491685 SLC17A8Q8NDX2 589 aa13.35□□□□□ -0.27
TMEM39A-211ENST00000491685 PXYLP1Q8TE99 480 aa13.35□□□□□ -0.27
TMEM39A-211ENST00000491685 EDC3Q96F86 508 aaKnown RBP13.35□□□□□ -0.27
TMEM39A-211ENST00000491685 P2RX7Q99572 595 aaKnown RBP13.35□□□□□ -0.27
TMEM39A-211ENST00000491685 TRIM34Q9BYJ4 488 aa13.35□□□□□ -0.27
TMEM39A-211ENST00000491685 BCL11AQ9H165 835 aa13.35□□□□□ -0.27
TMEM39A-211ENST00000491685 EMILIN3Q9NT22 766 aa13.35□□□□□ -0.27
TMEM39A-211ENST00000491685 MORF4L1Q9UBU8 362 aa13.35□□□□□ -0.27
TMEM39A-211ENST00000491685 FARP2O94887 1054 aaPredicted RBP13.34□□□□□ -0.27
TMEM39A-211ENST00000491685 HLA-DOAP06340 250 aa13.34□□□□□ -0.27
TMEM39A-211ENST00000491685 IRX3P78415 501 aaPredicted RBP13.34□□□□□ -0.27
TMEM39A-211ENST00000491685 MAP3K12Q12852 859 aa13.34□□□□□ -0.27
TMEM39A-211ENST00000491685 PABPC4Q13310 644 aaKnown RBP eCLIP13.34□□□□□ -0.27
TMEM39A-211ENST00000491685 ZYXQ15942 572 aaKnown RBP13.34□□□□□ -0.27
TMEM39A-211ENST00000491685 TATDN1Q6P1N9 297 aa13.34□□□□□ -0.27
TMEM39A-211ENST00000491685 CERS3Q8IU89 383 aa13.34□□□□□ -0.27
TMEM39A-211ENST00000491685 NKX2-3Q8TAU0 364 aa13.34□□□□□ -0.27
TMEM39A-211ENST00000491685 DPF3Q92784 378 aa13.34□□□□□ -0.27
TMEM39A-211ENST00000491685 COA7Q96BR5 231 aa13.34□□□□□ -0.27
TMEM39A-211ENST00000491685 PAK6Q9NQU5 681 aaPredicted RBP13.34□□□□□ -0.27
TMEM39A-211ENST00000491685 TMOD4Q9NZQ9 345 aa13.34□□□□□ -0.27
TMEM39A-211ENST00000491685 GJD2Q9UKL4 321 aa13.34□□□□□ -0.27
TMEM39A-211ENST00000491685 A0A0C4DFX4 3053 aa13.34□□□□□ -0.27
TMEM39A-211ENST00000491685 A0A1W2PPC1 479 aa13.33□□□□□ -0.28
TMEM39A-211ENST00000491685 TCRBV5S4A2TA0A5A2 114 aa13.33□□□□□ -0.28
TMEM39A-211ENST00000491685 USP17L10C9JJH3 530 aa13.33□□□□□ -0.28
TMEM39A-211ENST00000491685 SGPL1O95470 568 aa13.33□□□□□ -0.28
TMEM39A-211ENST00000491685 CHGBP05060 677 aa13.33□□□□□ -0.28
TMEM39A-211ENST00000491685 PDE6AP16499 860 aa13.33□□□□□ -0.28
TMEM39A-211ENST00000491685 HOXA7P31268 230 aaPredicted RBP13.33□□□□□ -0.28
TMEM39A-211ENST00000491685 SHMT1P34896 483 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms