RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 TMEM106CQ9BVX2 250 aa10.88□□□□□ -0.67
HDAC3-211ENST00000491581 ASCC2Q9H1I8 757 aaPredicted RBP10.88□□□□□ -0.67
HDAC3-211ENST00000491581 TXNRD2Q9NNW7 524 aa10.88□□□□□ -0.67
HDAC3-211ENST00000491581 RCAN3Q9UKA8 241 aa10.88□□□□□ -0.67
HDAC3-211ENST00000491581 KIAA0100Q14667 2235 aaKnown RBP10.88□□□□□ -0.67
HDAC3-211ENST00000491581 MYH8P13535 1937 aa10.88□□□□□ -0.67
HDAC3-211ENST00000491581 PDE4DIPQ5VU43 2346 aa10.87□□□□□ -0.67
HDAC3-211ENST00000491581 CYP2D7A0A087X1C5 515 aa10.87□□□□□ -0.67
HDAC3-211ENST00000491581 USP17L5A8MUK1 530 aa10.87□□□□□ -0.67
HDAC3-211ENST00000491581 PRKAB2O43741 272 aa10.87□□□□□ -0.67
HDAC3-211ENST00000491581 GH2P01242 217 aa10.87□□□□□ -0.67
HDAC3-211ENST00000491581 FCGRTP55899 365 aa10.87□□□□□ -0.67
HDAC3-211ENST00000491581 TSHZ3Q63HK5 1081 aa10.87□□□□□ -0.67
HDAC3-211ENST00000491581 LCORLQ8N3X6 602 aa10.87□□□□□ -0.67
HDAC3-211ENST00000491581 CRACR2BQ8N4Y2 399 aaPredicted RBP10.87□□□□□ -0.67
HDAC3-211ENST00000491581 SLC44A5Q8NCS7 719 aa10.87□□□□□ -0.67
HDAC3-211ENST00000491581 ACER1Q8TDN7 264 aa10.87□□□□□ -0.67
HDAC3-211ENST00000491581 P2RX7Q99572 595 aaKnown RBP10.87□□□□□ -0.67
HDAC3-211ENST00000491581 RIOK1Q9BRS2 568 aaKnown RBP10.87□□□□□ -0.67
HDAC3-211ENST00000491581 BOLA2Q9H3K6 86 aa10.87□□□□□ -0.67
HDAC3-211ENST00000491581 PI4KBQ9UBF8 816 aa10.87□□□□□ -0.67
HDAC3-211ENST00000491581 BIN2Q9UBW5 565 aaPredicted RBP10.87□□□□□ -0.67
HDAC3-211ENST00000491581 ZBTB21Q9ULJ3 1066 aa10.87□□□□□ -0.67
HDAC3-211ENST00000491581 ZNF532Q9HCE3 1301 aa10.86□□□□□ -0.67
HDAC3-211ENST00000491581 TCRBV5S4A2TA0A5A2 114 aa10.86□□□□□ -0.67
HDAC3-211ENST00000491581 TNPO2O14787 897 aaKnown RBP10.86□□□□□ -0.67
HDAC3-211ENST00000491581 ADCY3O60266 1144 aa10.86□□□□□ -0.67
HDAC3-211ENST00000491581 BAG3O95817 575 aa10.86□□□□□ -0.67
HDAC3-211ENST00000491581 INHAP05111 366 aa10.86□□□□□ -0.67
HDAC3-211ENST00000491581 PDE6AP16499 860 aa10.86□□□□□ -0.67
HDAC3-211ENST00000491581 USP5P45974 858 aa10.86□□□□□ -0.67
HDAC3-211ENST00000491581 Q3C1V9 767 aa10.86□□□□□ -0.67
HDAC3-211ENST00000491581 NBPF11Q86T75 865 aa10.86□□□□□ -0.67
HDAC3-211ENST00000491581 RNF208Q9H0X6 261 aa10.86□□□□□ -0.67
HDAC3-211ENST00000491581 ARMT1Q9H993 441 aa10.86□□□□□ -0.67
HDAC3-211ENST00000491581 EMILIN3Q9NT22 766 aa10.86□□□□□ -0.67
HDAC3-211ENST00000491581 GUCY1A2P33402 732 aa10.85□□□□□ -0.67
HDAC3-211ENST00000491581 SHMT1P34896 483 aa10.85□□□□□ -0.67
HDAC3-211ENST00000491581 KIAA1755Q5JYT7 1200 aa10.85□□□□□ -0.67
HDAC3-211ENST00000491581 SLC9C2Q5TAH2 1124 aa10.85□□□□□ -0.67
HDAC3-211ENST00000491581 METTL16Q86W50 562 aaKnown RBP10.85□□□□□ -0.67
HDAC3-211ENST00000491581 DYNLL2Q96FJ2 89 aa10.85□□□□□ -0.67
HDAC3-211ENST00000491581 HERC5Q9UII4 1024 aaKnown RBP10.85□□□□□ -0.67
HDAC3-211ENST00000491581 FRMPD3Q5JV73 1810 aa10.84□□□□□ -0.67
HDAC3-211ENST00000491581 RLFQ13129 1914 aa10.84□□□□□ -0.67
HDAC3-211ENST00000491581 MAGEB6P1A0A0J9YX57 407 aa10.84□□□□□ -0.67
HDAC3-211ENST00000491581 H0YGN5 161 aa10.84□□□□□ -0.67
HDAC3-211ENST00000491581 BACE1P56817 501 aa10.84□□□□□ -0.67
HDAC3-211ENST00000491581 RAB3GAP1Q15042 981 aa10.84□□□□□ -0.67
HDAC3-211ENST00000491581 SH3D19Q5HYK7 790 aa10.84□□□□□ -0.67
HDAC3-211ENST00000491581 STK11IPQ8N1F8 1099 aa10.84□□□□□ -0.67
HDAC3-211ENST00000491581 PROCA1Q8NCQ7 364 aaPredicted RBP10.84□□□□□ -0.67
HDAC3-211ENST00000491581 DIS3LQ8TF46 1054 aaKnown RBP10.84□□□□□ -0.67
HDAC3-211ENST00000491581 PAGR1Q9BTK6 254 aa10.84□□□□□ -0.67
HDAC3-211ENST00000491581 PORCNQ9H237 461 aa10.84□□□□□ -0.67
HDAC3-211ENST00000491581 RBPJLQ9UBG7 517 aa10.84□□□□□ -0.67
HDAC3-211ENST00000491581 COLQQ9Y215 455 aaPredicted RBP10.84□□□□□ -0.67
HDAC3-211ENST00000491581 SLC45A1Q9Y2W3 748 aa10.84□□□□□ -0.67
HDAC3-211ENST00000491581 COL11A1P12107 1806 aaPredicted RBP10.84□□□□□ -0.67
HDAC3-211ENST00000491581 PARP14Q460N5 1801 aa10.84□□□□□ -0.67
HDAC3-211ENST00000491581 A0A1W2PRG0 241 aa10.83□□□□□ -0.68
HDAC3-211ENST00000491581 CNMDO75829 334 aa10.83□□□□□ -0.68
HDAC3-211ENST00000491581 MAP4K4O95819 1239 aaPredicted RBP10.83□□□□□ -0.68
HDAC3-211ENST00000491581 IFIT2P09913 472 aaKnown RBP10.83□□□□□ -0.68
HDAC3-211ENST00000491581 PLCG2P16885 1265 aa10.83□□□□□ -0.68
HDAC3-211ENST00000491581 CYP2B6P20813 491 aa10.83□□□□□ -0.68
HDAC3-211ENST00000491581 HERVK_113P62684 666 aa10.83□□□□□ -0.68
HDAC3-211ENST00000491581 MAP3K12Q12852 859 aa10.83□□□□□ -0.68
HDAC3-211ENST00000491581 SEPT2Q15019 361 aa10.83□□□□□ -0.68
HDAC3-211ENST00000491581 ARHGEF6Q15052 776 aa10.83□□□□□ -0.68
HDAC3-211ENST00000491581 CCL14Q16627 93 aa10.83□□□□□ -0.68
HDAC3-211ENST00000491581 ERC1Q8IUD2 1116 aa10.83□□□□□ -0.68
HDAC3-211ENST00000491581 FOXP4Q8IVH2 680 aaPredicted RBP10.83□□□□□ -0.68
HDAC3-211ENST00000491581 U2AF1L4Q8WU68 220 aaKnown RBP10.83□□□□□ -0.68
HDAC3-211ENST00000491581 KIF1BPQ96EK5 621 aa10.83□□□□□ -0.68
HDAC3-211ENST00000491581 DEFB118Q96PH6 123 aa10.83□□□□□ -0.68
HDAC3-211ENST00000491581 WDR18Q9BV38 432 aa10.83□□□□□ -0.68
HDAC3-211ENST00000491581 TRIM34Q9BYJ4 488 aa10.83□□□□□ -0.68
HDAC3-211ENST00000491581 DHX36Q9H2U1 1008 aaKnown RBP10.83□□□□□ -0.68
HDAC3-211ENST00000491581 GJD2Q9UKL4 321 aa10.83□□□□□ -0.68
HDAC3-211ENST00000491581 DDX19BQ9UMR2 479 aa10.83□□□□□ -0.68
HDAC3-211ENST00000491581 USP17L10C9JJH3 530 aa10.82□□□□□ -0.68
HDAC3-211ENST00000491581 MBD4O95243 580 aa10.82□□□□□ -0.68
HDAC3-211ENST00000491581 GNRH1P01148 92 aa10.82□□□□□ -0.68
HDAC3-211ENST00000491581 HLA-DOAP06340 250 aa10.82□□□□□ -0.68
HDAC3-211ENST00000491581 ASNSP08243 561 aa10.82□□□□□ -0.68
HDAC3-211ENST00000491581 HOXD10P28358 340 aa10.82□□□□□ -0.68
HDAC3-211ENST00000491581 GJA8P48165 433 aa10.82□□□□□ -0.68
HDAC3-211ENST00000491581 PRMT2P55345 433 aa10.82□□□□□ -0.68
HDAC3-211ENST00000491581 FAM110CQ1W6H9 321 aa10.82□□□□□ -0.68
HDAC3-211ENST00000491581 HABP4Q5JVS0 413 aaKnown RBP10.82□□□□□ -0.68
HDAC3-211ENST00000491581 TATDN1Q6P1N9 297 aa10.82□□□□□ -0.68
HDAC3-211ENST00000491581 UBE2Q1Q7Z7E8 422 aa10.82□□□□□ -0.68
HDAC3-211ENST00000491581 RPAP2Q8IXW5 612 aaPredicted RBP10.82□□□□□ -0.68
HDAC3-211ENST00000491581 CLASRPQ8N2M8 674 aaKnown RBP10.82□□□□□ -0.68
HDAC3-211ENST00000491581 OTUD7AQ8TE49 926 aaPredicted RBP10.82□□□□□ -0.68
HDAC3-211ENST00000491581 TRIB2Q92519 343 aa10.82□□□□□ -0.68
HDAC3-211ENST00000491581 AS3MTQ9HBK9 375 aa10.82□□□□□ -0.68
HDAC3-211ENST00000491581 SERPINB13Q9UIV8 391 aa10.82□□□□□ -0.68
HDAC3-211ENST00000491581 POLR3DP05423 398 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms