RNA–Protein interactions for RNA: ENST00000491541.1

SREBF2-208, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 4,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-208ENST00000491541 TRIM37O94972 964 aa11.74□□□□□ -0.53
SREBF2-208ENST00000491541 KIF4BQ2VIQ3 1234 aa11.74□□□□□ -0.53
SREBF2-208ENST00000491541 AATFQ9NY61 560 aaKnown RBP eCLIP11.74□□□□□ -0.531e-6■■□□□ 14.3
SREBF2-208ENST00000491541 CHPF2Q9P2E5 772 aa11.74□□□□□ -0.53
SREBF2-208ENST00000491541 NENFQ9UMX5 172 aa11.74□□□□□ -0.53
SREBF2-208ENST00000491541 KIF28PB7ZC32 967 aa11.74□□□□□ -0.53
SREBF2-208ENST00000491541 HSP90B1P14625 803 aaKnown RBP11.74□□□□□ -0.53
SREBF2-208ENST00000491541 ZSCAN29Q8IWY8 852 aaPredicted RBP11.74□□□□□ -0.53
SREBF2-208ENST00000491541 TLR7Q9NYK1 1049 aaKnown RBP11.74□□□□□ -0.53
SREBF2-208ENST00000491541 EID1Q9Y6B2 187 aa11.74□□□□□ -0.53
SREBF2-208ENST00000491541 MAST3O60307 1309 aa11.74□□□□□ -0.53
SREBF2-208ENST00000491541 PJA2O43164 708 aa11.73□□□□□ -0.53
SREBF2-208ENST00000491541 MFAP3LO75121 409 aa11.73□□□□□ -0.53
SREBF2-208ENST00000491541 RASSF9O75901 435 aa11.73□□□□□ -0.53
SREBF2-208ENST00000491541 PPP2R5BQ15173 497 aa11.73□□□□□ -0.53
SREBF2-208ENST00000491541 TCRBV5S4A2TA0A5A2 114 aa11.73□□□□□ -0.53
SREBF2-208ENST00000491541 IFNKQ9P0W0 207 aa11.73□□□□□ -0.53
SREBF2-208ENST00000491541 ANAPC4Q9UJX5 808 aa11.73□□□□□ -0.53
SREBF2-208ENST00000491541 A0A087WWV3 80 aa11.73□□□□□ -0.53
SREBF2-208ENST00000491541 MYL1P05976 194 aa11.73□□□□□ -0.53
SREBF2-208ENST00000491541 RXRBP28702 533 aa11.73□□□□□ -0.53
SREBF2-208ENST00000491541 APBA1Q02410 837 aa11.73□□□□□ -0.53
SREBF2-208ENST00000491541 STK11IPQ8N1F8 1099 aa11.73□□□□□ -0.53
SREBF2-208ENST00000491541 BICC1Q9H694 974 aaKnown RBP11.73□□□□□ -0.53
SREBF2-208ENST00000491541 SPTLC2O15270 562 aa11.72□□□□□ -0.53
SREBF2-208ENST00000491541 HSPD1P10809 573 aaKnown RBP11.72□□□□□ -0.53
SREBF2-208ENST00000491541 MCTP2Q6DN12 878 aa11.72□□□□□ -0.53
SREBF2-208ENST00000491541 KANK3Q6NY19 840 aa11.72□□□□□ -0.53
SREBF2-208ENST00000491541 ZC3H3Q8IXZ2 948 aaKnown RBP11.72□□□□□ -0.53
SREBF2-208ENST00000491541 REXO2Q9Y3B8 237 aaKnown RBP11.72□□□□□ -0.53
SREBF2-208ENST00000491541 PI4KAP2A4QPH2 592 aa11.72□□□□□ -0.53
SREBF2-208ENST00000491541 EIF3CLB5ME19 914 aaKnown RBP11.72□□□□□ -0.53
SREBF2-208ENST00000491541 KINO60870 393 aaKnown RBP11.72□□□□□ -0.53
SREBF2-208ENST00000491541 PIP4K2BP78356 416 aa11.72□□□□□ -0.53
SREBF2-208ENST00000491541 NBPF14Q5TI25 921 aa11.72□□□□□ -0.53
SREBF2-208ENST00000491541 CCDC155Q8N6L0 562 aa11.72□□□□□ -0.53
SREBF2-208ENST00000491541 VGLL2Q8N8G2 317 aa11.72□□□□□ -0.53
SREBF2-208ENST00000491541 PI4KAP1Q8N8J0 262 aa11.72□□□□□ -0.53
SREBF2-208ENST00000491541 EIF3CQ99613 913 aaKnown RBP11.72□□□□□ -0.53
SREBF2-208ENST00000491541 MRPL44Q9H9J2 332 aaKnown RBP11.72□□□□□ -0.53
SREBF2-208ENST00000491541 SIP14410 1827 aa11.72□□□□□ -0.53
SREBF2-208ENST00000491541 SETD1BQ9UPS6 1966 aaKnown RBP11.72□□□□□ -0.53
SREBF2-208ENST00000491541 COL14A1Q05707 1796 aaKnown RBP11.72□□□□□ -0.53
SREBF2-208ENST00000491541 CCDC189A1A4V9 331 aa11.72□□□□□ -0.53
SREBF2-208ENST00000491541 RGL2O15211 777 aa11.72□□□□□ -0.53
SREBF2-208ENST00000491541 ALADP13716 330 aa11.72□□□□□ -0.53
SREBF2-208ENST00000491541 KCNH5Q8NCM2 988 aa11.72□□□□□ -0.53
SREBF2-208ENST00000491541 SRPRBQ9Y5M8 271 aaKnown RBP11.72□□□□□ -0.53
SREBF2-208ENST00000491541 CSF1RP07333 972 aa11.71□□□□□ -0.53
SREBF2-208ENST00000491541 KIAA0753Q2KHM9 967 aa11.71□□□□□ -0.53
SREBF2-208ENST00000491541 CCDC73Q6ZRK6 1079 aa11.71□□□□□ -0.53
SREBF2-208ENST00000491541 TBC1D22AQ8WUA7 517 aa11.71□□□□□ -0.53
SREBF2-208ENST00000491541 PSMD1Q99460 953 aa11.71□□□□□ -0.53
SREBF2-208ENST00000491541 ZCCHC17Q9NP64 241 aaKnown RBP11.71□□□□□ -0.53
SREBF2-208ENST00000491541 TMEM59LQ9UK28 342 aa11.71□□□□□ -0.53
SREBF2-208ENST00000491541 CLIC4Q9Y696 253 aa11.71□□□□□ -0.53
SREBF2-208ENST00000491541 PDS5AQ29RF7 1337 aaKnown RBP11.71□□□□□ -0.53
SREBF2-208ENST00000491541 LOC285556D6RIA3 1793 aa11.71□□□□□ -0.53
SREBF2-208ENST00000491541 LEKR1Q6ZMV7 388 aa11.71□□□□□ -0.53
SREBF2-208ENST00000491541 FSIP1Q8NA03 581 aa11.71□□□□□ -0.53
SREBF2-208ENST00000491541 COG1Q8WTW3 980 aa11.71□□□□□ -0.53
SREBF2-208ENST00000491541 P3H4Q92791 437 aa11.71□□□□□ -0.53
SREBF2-208ENST00000491541 BAG1Q99933 345 aaPredicted RBP11.71□□□□□ -0.53
SREBF2-208ENST00000491541 KCNMB3Q9NPA1 279 aa11.71□□□□□ -0.53
SREBF2-208ENST00000491541 NCKAP5LQ9HCH0 1330 aa11.71□□□□□ -0.54
SREBF2-208ENST00000491541 TRIM66O15016 1216 aa11.71□□□□□ -0.54
SREBF2-208ENST00000491541 SEC31AO94979 1220 aaKnown RBP11.71□□□□□ -0.54
SREBF2-208ENST00000491541 LTKP29376 864 aa11.71□□□□□ -0.54
SREBF2-208ENST00000491541 CDC27P30260 824 aa11.71□□□□□ -0.54
SREBF2-208ENST00000491541 TADA2BQ86TJ2 420 aa11.71□□□□□ -0.54
SREBF2-208ENST00000491541 RTN2O75298 545 aa11.7□□□□□ -0.54
SREBF2-208ENST00000491541 DPYDQ12882 1025 aa11.7□□□□□ -0.54
SREBF2-208ENST00000491541 GLE1Q53GS7 698 aaKnown RBP11.7□□□□□ -0.54
SREBF2-208ENST00000491541 MAB21L3Q8N8X9 362 aa11.7□□□□□ -0.54
SREBF2-208ENST00000491541 MYCBPQ99417 103 aaPredicted RBP11.7□□□□□ -0.54
SREBF2-208ENST00000491541 SDF4Q9BRK5 362 aa11.7□□□□□ -0.54
SREBF2-208ENST00000491541 MCM8Q9UJA3 840 aa11.7□□□□□ -0.54
SREBF2-208ENST00000491541 MAN1B1Q9UKM7 699 aa11.7□□□□□ -0.54
SREBF2-208ENST00000491541 NRXN2Q9P2S2 1712 aa11.7□□□□□ -0.54
SREBF2-208ENST00000491541 PPP1R3GB7ZBB8 358 aa11.7□□□□□ -0.54
SREBF2-208ENST00000491541 GYS2P54840 703 aa11.7□□□□□ -0.54
SREBF2-208ENST00000491541 FUT2Q10981 343 aa11.7□□□□□ -0.54
SREBF2-208ENST00000491541 TNFAIP8L3Q5GJ75 292 aa11.7□□□□□ -0.54
SREBF2-208ENST00000491541 TOGARAM2Q6ZUX3 1019 aa11.7□□□□□ -0.54
SREBF2-208ENST00000491541 ERCC4Q92889 916 aaPredicted RBP11.7□□□□□ -0.54
SREBF2-208ENST00000491541 TAF1LQ8IZX4 1826 aa11.7□□□□□ -0.54
SREBF2-208ENST00000491541 PPFIA3O75145 1194 aa11.7□□□□□ -0.54
SREBF2-208ENST00000491541 TOB1P50616 345 aaPredicted RBP11.7□□□□□ -0.54
SREBF2-208ENST00000491541 PDE4BQ07343 736 aa11.7□□□□□ -0.54
SREBF2-208ENST00000491541 CASP8Q14790 479 aa11.7□□□□□ -0.54
SREBF2-208ENST00000491541 RAD9BQ6WBX8 426 aa11.7□□□□□ -0.54
SREBF2-208ENST00000491541 SYNE3Q6ZMZ3 975 aa11.7□□□□□ -0.54
SREBF2-208ENST00000491541 IGDCC4Q8TDY8 1250 aa11.7□□□□□ -0.54
SREBF2-208ENST00000491541 CTAGE1Q96RT6 745 aa11.7□□□□□ -0.54
SREBF2-208ENST00000491541 ZSWIM4Q9H7M6 989 aa11.7□□□□□ -0.54
SREBF2-208ENST00000491541 STRN4Q9NRL3 753 aa11.7□□□□□ -0.54
SREBF2-208ENST00000491541 DACH1Q9UI36 760 aa11.7□□□□□ -0.54
SREBF2-208ENST00000491541 FMNL1O95466 1100 aaPredicted RBP11.7□□□□□ -0.54
SREBF2-208ENST00000491541 NUTM2AQ8IVF1 878 aaPredicted RBP11.7□□□□□ -0.54
SREBF2-208ENST00000491541 DHX58Q96C10 678 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms