RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 RASA1P20936 1047 aa25.66■■□□□ 1.7
VCPKMT-204ENST00000491402 ANTXR2P58335 489 aa25.66■■□□□ 1.7
VCPKMT-204ENST00000491402 EXOSC10Q01780 885 aaKnown RBP25.66■■□□□ 1.7
VCPKMT-204ENST00000491402 CYB5R4Q7L1T6 521 aa25.66■■□□□ 1.7
VCPKMT-204ENST00000491402 PDRG1Q9NUG6 133 aa25.66■■□□□ 1.7
VCPKMT-204ENST00000491402 HERC5Q9UII4 1024 aaKnown RBP25.66■■□□□ 1.7
VCPKMT-204ENST00000491402 ST18O60284 1047 aa25.65■■□□□ 1.7
VCPKMT-204ENST00000491402 SHMT1P34896 483 aa25.65■■□□□ 1.7
VCPKMT-204ENST00000491402 NT5C2P49902 561 aa25.65■■□□□ 1.7
VCPKMT-204ENST00000491402 NBPF12Q5TAG4 269 aaPredicted RBP25.65■■□□□ 1.7
VCPKMT-204ENST00000491402 IL27Q8NEV9 243 aa25.65■■□□□ 1.7
VCPKMT-204ENST00000491402 PRC1O43663 620 aa25.64■■□□□ 1.7
VCPKMT-204ENST00000491402 ANP32AP39687 249 aaKnown RBP25.64■■□□□ 1.7
VCPKMT-204ENST00000491402 ZNF444Q8N0Y2 327 aaPredicted RBP25.64■■□□□ 1.7
VCPKMT-204ENST00000491402 ZNF408Q9H9D4 720 aa25.64■■□□□ 1.7
VCPKMT-204ENST00000491402 WDR19Q8NEZ3 1342 aa25.64■■□□□ 1.69
VCPKMT-204ENST00000491402 PASKQ96RG2 1323 aa25.64■■□□□ 1.69
VCPKMT-204ENST00000491402 CD2BP2O95400 341 aaKnown RBP25.64■■□□□ 1.69
VCPKMT-204ENST00000491402 FAM47AQ5JRC9 791 aa25.64■■□□□ 1.69
VCPKMT-204ENST00000491402 LRRC2Q9BYS8 371 aa25.64■■□□□ 1.69
VCPKMT-204ENST00000491402 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.64■■□□□ 1.69
VCPKMT-204ENST00000491402 TSPY2A6NKD2 308 aa25.63■■□□□ 1.69
VCPKMT-204ENST00000491402 TBC1D12O60347 775 aa25.62■■□□□ 1.69
VCPKMT-204ENST00000491402 TATDN1Q6P1N9 297 aa25.62■■□□□ 1.69
VCPKMT-204ENST00000491402 AK2P54819 239 aa25.61■■□□□ 1.69
VCPKMT-204ENST00000491402 TFAP4Q01664 338 aa25.61■■□□□ 1.69
VCPKMT-204ENST00000491402 MAP3K10Q02779 954 aa25.61■■□□□ 1.69
VCPKMT-204ENST00000491402 MIGA2Q7L4E1 593 aa25.61■■□□□ 1.69
VCPKMT-204ENST00000491402 CELF2O95319 508 aaKnown RBP25.61■■□□□ 1.69
VCPKMT-204ENST00000491402 TSPY3P0CV98 308 aa25.61■■□□□ 1.69
VCPKMT-204ENST00000491402 TSPY8P0CW00 308 aa25.61■■□□□ 1.69
VCPKMT-204ENST00000491402 SUPT20HL1Q3ZLR7 823 aa25.61■■□□□ 1.69
VCPKMT-204ENST00000491402 Q6ZUG5 572 aa25.61■■□□□ 1.69
VCPKMT-204ENST00000491402 ALDH8A1Q9H2A2 487 aaPredicted RBP25.61■■□□□ 1.69
VCPKMT-204ENST00000491402 GREB1LQ9C091 1923 aaPredicted RBP25.6■■□□□ 1.69
VCPKMT-204ENST00000491402 IQCA1Q86XH1 822 aa25.6■■□□□ 1.69
VCPKMT-204ENST00000491402 TMEM87BQ96K49 555 aa25.6■■□□□ 1.69
VCPKMT-204ENST00000491402 ZKSCAN3Q9BRR0 538 aa25.6■■□□□ 1.69
VCPKMT-204ENST00000491402 AGXT2Q9BYV1 514 aa25.6■■□□□ 1.69
VCPKMT-204ENST00000491402 FGD1P98174 961 aa25.59■■□□□ 1.69
VCPKMT-204ENST00000491402 PRKG1Q13976 671 aa25.59■■□□□ 1.69
VCPKMT-204ENST00000491402 TOB2Q14106 344 aaPredicted RBP25.59■■□□□ 1.69
VCPKMT-204ENST00000491402 CST9Q5W186 159 aa25.59■■□□□ 1.69
VCPKMT-204ENST00000491402 FBXL16Q8N461 479 aa25.59■■□□□ 1.69
VCPKMT-204ENST00000491402 SNX21Q969T3 373 aa25.59■■□□□ 1.69
VCPKMT-204ENST00000491402 HOOK2Q96ED9 719 aa25.59■■□□□ 1.69
VCPKMT-204ENST00000491402 UBAC1Q9BSL1 405 aa25.59■■□□□ 1.69
VCPKMT-204ENST00000491402 MTA3Q9BTC8 594 aa25.59■■□□□ 1.69
VCPKMT-204ENST00000491402 FZD1Q9UP38 647 aa25.59■■□□□ 1.69
VCPKMT-204ENST00000491402 SSC5DA1L4H1 1573 aa25.59■■□□□ 1.69
VCPKMT-204ENST00000491402 NF2P35240 595 aa25.59■■□□□ 1.69
VCPKMT-204ENST00000491402 SART3Q15020 963 aaKnown RBP25.59■■□□□ 1.69
VCPKMT-204ENST00000491402 CERKLQ49MI3 558 aaPredicted RBP25.59■■□□□ 1.69
VCPKMT-204ENST00000491402 CCDC17Q96LX7 622 aa25.59■■□□□ 1.69
VCPKMT-204ENST00000491402 PLIN4Q96Q06 1357 aa25.58■■□□□ 1.69
VCPKMT-204ENST00000491402 AKR1B1P15121 316 aa25.58■■□□□ 1.69
VCPKMT-204ENST00000491402 ANKRD1Q15327 319 aa25.58■■□□□ 1.69
VCPKMT-204ENST00000491402 NEDD1Q8NHV4 660 aa25.58■■□□□ 1.69
VCPKMT-204ENST00000491402 IGDCC4Q8TDY8 1250 aa25.58■■□□□ 1.69
VCPKMT-204ENST00000491402 ZSCAN10Q96SZ4 725 aaPredicted RBP25.58■■□□□ 1.69
VCPKMT-204ENST00000491402 GPHNQ9NQX3 736 aaPredicted RBP25.58■■□□□ 1.69
VCPKMT-204ENST00000491402 ANGEL1Q9UNK9 670 aaKnown RBP25.58■■□□□ 1.69
VCPKMT-204ENST00000491402 TNKSO95271 1327 aa25.57■■□□□ 1.68
VCPKMT-204ENST00000491402 SH2B2O14492 632 aaPredicted RBP25.57■■□□□ 1.68
VCPKMT-204ENST00000491402 IFIT3O14879 490 aaKnown RBP25.57■■□□□ 1.68
VCPKMT-204ENST00000491402 NMT2O60551 498 aa25.57■■□□□ 1.68
VCPKMT-204ENST00000491402 TMEM67Q5HYA8 995 aa25.57■■□□□ 1.68
VCPKMT-204ENST00000491402 DCAF15Q66K64 600 aa25.57■■□□□ 1.68
VCPKMT-204ENST00000491402 NOL8Q76FK4 1167 aaKnown RBP25.57■■□□□ 1.68
VCPKMT-204ENST00000491402 BRF1Q92994 677 aa25.57■■□□□ 1.68
VCPKMT-204ENST00000491402 MCM2P49736 904 aa25.56■■□□□ 1.68
VCPKMT-204ENST00000491402 IL17RBQ9NRM6 502 aa25.56■■□□□ 1.68
VCPKMT-204ENST00000491402 ERICH2A1L162 156 aa25.56■■□□□ 1.68
VCPKMT-204ENST00000491402 RRP1BQ14684 758 aaKnown RBP25.56■■□□□ 1.68
VCPKMT-204ENST00000491402 ENAHQ8N8S7 591 aaPredicted RBP25.56■■□□□ 1.68
VCPKMT-204ENST00000491402 LARP6Q9BRS8 491 aaKnown RBP25.56■■□□□ 1.68
VCPKMT-204ENST00000491402 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.56■■□□□ 1.68
VCPKMT-204ENST00000491402 LY9Q9HBG7 655 aa25.56■■□□□ 1.68
VCPKMT-204ENST00000491402 TCP11L1Q9NUJ3 509 aa25.56■■□□□ 1.68
VCPKMT-204ENST00000491402 TRPM7Q96QT4 1865 aa25.56■■□□□ 1.68
VCPKMT-204ENST00000491402 ATAD5Q96QE3 1844 aa25.55■■□□□ 1.68
VCPKMT-204ENST00000491402 MPHOSPH10O00566 681 aaKnown RBP25.55■■□□□ 1.68
VCPKMT-204ENST00000491402 GDF11O95390 407 aa25.55■■□□□ 1.68
VCPKMT-204ENST00000491402 TTLL12Q14166 644 aaPredicted RBP25.55■■□□□ 1.68
VCPKMT-204ENST00000491402 SEC23AQ15436 765 aa25.55■■□□□ 1.68
VCPKMT-204ENST00000491402 MOB2Q70IA6 237 aa25.55■■□□□ 1.68
VCPKMT-204ENST00000491402 HSCBQ8IWL3 235 aa25.55■■□□□ 1.68
VCPKMT-204ENST00000491402 TBC1D2Q9BYX2 928 aa25.55■■□□□ 1.68
VCPKMT-204ENST00000491402 LIFRP42702 1097 aa25.54■■□□□ 1.68
VCPKMT-204ENST00000491402 C1QTNF8P60827 252 aa25.54■■□□□ 1.68
VCPKMT-204ENST00000491402 SHROOM1Q2M3G4 852 aaPredicted RBP25.54■■□□□ 1.68
VCPKMT-204ENST00000491402 GBA2Q9HCG7 927 aaPredicted RBP25.54■■□□□ 1.68
VCPKMT-204ENST00000491402 PHF20L1A8MW92 1017 aa25.54■■□□□ 1.68
VCPKMT-204ENST00000491402 WTAPQ15007 396 aa25.54■■□□□ 1.68
VCPKMT-204ENST00000491402 ABCB5Q2M3G0 1257 aa25.54■■□□□ 1.68
VCPKMT-204ENST00000491402 CEP95Q96GE4 821 aa25.54■■□□□ 1.68
VCPKMT-204ENST00000491402 SENP2Q9HC62 589 aa25.54■■□□□ 1.68
VCPKMT-204ENST00000491402 PPP1R12BO60237 982 aaPredicted RBP25.53■■□□□ 1.68
VCPKMT-204ENST00000491402 USP2O75604 605 aaPredicted RBP25.53■■□□□ 1.68
VCPKMT-204ENST00000491402 C2orf69Q8N8R5 385 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms