RNA–Protein interactions for RNA: ENST00000491362.1

USP30-207, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 2

Gene USP30, Length 745 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-207ENST00000491362 PCDHB8Q9UN66 801 aa10.4□□□□□ -0.74
USP30-207ENST00000491362 PCDHB13Q9Y5F0 798 aa10.4□□□□□ -0.74
USP30-207ENST00000491362 PTPRFP10586 1907 aa10.4□□□□□ -0.74
USP30-207ENST00000491362 FLT1P17948 1338 aa10.39□□□□□ -0.75
USP30-207ENST00000491362 C19orf81C9J6K1 198 aa10.39□□□□□ -0.75
USP30-207ENST00000491362 SLURP2P0DP57 97 aa10.39□□□□□ -0.75
USP30-207ENST00000491362 ZAP70P43403 619 aa10.39□□□□□ -0.75
USP30-207ENST00000491362 BACE1P56817 501 aa10.39□□□□□ -0.75
USP30-207ENST00000491362 UBXN2AP68543 259 aa10.39□□□□□ -0.75
USP30-207ENST00000491362 PRKCZQ05513 592 aa10.39□□□□□ -0.75
USP30-207ENST00000491362 RRP1BQ14684 758 aaKnown RBP10.39□□□□□ -0.75
USP30-207ENST00000491362 ADGRA1Q86SQ6 560 aa10.39□□□□□ -0.75
USP30-207ENST00000491362 RPAP2Q8IXW5 612 aaPredicted RBP10.39□□□□□ -0.75
USP30-207ENST00000491362 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.39□□□□□ -0.75
USP30-207ENST00000491362 EHD4Q9H223 541 aa10.39□□□□□ -0.75
USP30-207ENST00000491362 PIH1D3Q9NQM4 214 aaKnown RBP10.39□□□□□ -0.75
USP30-207ENST00000491362 SNRKQ9NRH2 765 aa10.39□□□□□ -0.75
USP30-207ENST00000491362 LOC285556D6RIA3 1793 aa10.39□□□□□ -0.75
USP30-207ENST00000491362 KIAA0100Q14667 2235 aaKnown RBP10.38□□□□□ -0.75
USP30-207ENST00000491362 ZSWIM8A7E2V4 1837 aa10.38□□□□□ -0.75
USP30-207ENST00000491362 TREML2Q5T2D2 321 aa10.38□□□□□ -0.75
USP30-207ENST00000491362 TGFBRAP1Q8WUH2 860 aa10.38□□□□□ -0.75
USP30-207ENST00000491362 COA7Q96BR5 231 aa10.38□□□□□ -0.75
USP30-207ENST00000491362 SHISA4Q96DD7 197 aa10.38□□□□□ -0.75
USP30-207ENST00000491362 CHMP4BQ9H444 224 aaKnown RBP10.38□□□□□ -0.75
USP30-207ENST00000491362 C1orf115Q9H7X2 142 aa10.38□□□□□ -0.75
USP30-207ENST00000491362 DNAJC18Q9H819 358 aa10.38□□□□□ -0.75
USP30-207ENST00000491362 TLR7Q9NYK1 1049 aaKnown RBP10.38□□□□□ -0.75
USP30-207ENST00000491362 MORF4L1Q9UBU8 362 aa10.38□□□□□ -0.75
USP30-207ENST00000491362 FAM196BA6NMK8 535 aa10.37□□□□□ -0.75
USP30-207ENST00000491362 TNPO2O14787 897 aaKnown RBP10.37□□□□□ -0.75
USP30-207ENST00000491362 HLA-DOAP06340 250 aa10.37□□□□□ -0.75
USP30-207ENST00000491362 CCL5P13501 91 aa10.37□□□□□ -0.75
USP30-207ENST00000491362 CYP7A1P22680 504 aa10.37□□□□□ -0.75
USP30-207ENST00000491362 CENPFP49454 3210 aa10.37□□□□□ -0.75
USP30-207ENST00000491362 FLT3LGP49771 235 aa10.37□□□□□ -0.75
USP30-207ENST00000491362 MAP3K12Q12852 859 aa10.37□□□□□ -0.75
USP30-207ENST00000491362 TTF1Q15361 905 aaPredicted RBP10.37□□□□□ -0.75
USP30-207ENST00000491362 MTFR1Q15390 333 aa10.37□□□□□ -0.75
USP30-207ENST00000491362 TATDN1Q6P1N9 297 aa10.37□□□□□ -0.75
USP30-207ENST00000491362 ZNF579Q8NAF0 562 aaKnown RBP10.37□□□□□ -0.75
USP30-207ENST00000491362 CCDC8Q9H0W5 538 aaPredicted RBP10.37□□□□□ -0.75
USP30-207ENST00000491362 ASCC2Q9H1I8 757 aaPredicted RBP10.37□□□□□ -0.75
USP30-207ENST00000491362 ZBTB40Q9NUA8 1239 aa10.37□□□□□ -0.75
USP30-207ENST00000491362 DDX19BQ9UMR2 479 aa10.37□□□□□ -0.75
USP30-207ENST00000491362 GABRQQ9UN88 632 aa10.37□□□□□ -0.75
USP30-207ENST00000491362 SIPA1L1O43166 1804 aa10.37□□□□□ -0.75
USP30-207ENST00000491362 FOCADQ5VW36 1801 aa10.37□□□□□ -0.75
USP30-207ENST00000491362 BRCA2P51587 3418 aa10.36□□□□□ -0.75
USP30-207ENST00000491362 USP17L10C9JJH3 530 aa10.36□□□□□ -0.75
USP30-207ENST00000491362 ADCY3O60266 1144 aa10.36□□□□□ -0.75
USP30-207ENST00000491362 HMMRO75330 724 aa10.36□□□□□ -0.75
USP30-207ENST00000491362 SGPL1O95470 568 aa10.36□□□□□ -0.75
USP30-207ENST00000491362 PSEN1P49768 467 aa10.36□□□□□ -0.75
USP30-207ENST00000491362 HMGCS2P54868 508 aa10.36□□□□□ -0.75
USP30-207ENST00000491362 HABP4Q5JVS0 413 aaKnown RBP10.36□□□□□ -0.75
USP30-207ENST00000491362 CCDC84Q86UT8 332 aaPredicted RBP10.36□□□□□ -0.75
USP30-207ENST00000491362 MAPKAPK5Q8IW41 473 aa10.36□□□□□ -0.75
USP30-207ENST00000491362 ANKRD13CQ8N6S4 541 aa10.36□□□□□ -0.75
USP30-207ENST00000491362 RHPN1Q8TCX5 695 aa10.36□□□□□ -0.75
USP30-207ENST00000491362 GTF3C2Q8WUA4 911 aaPredicted RBP10.36□□□□□ -0.75
USP30-207ENST00000491362 KIF1BPQ96EK5 621 aa10.36□□□□□ -0.75
USP30-207ENST00000491362 RNF208Q9H0X6 261 aa10.36□□□□□ -0.75
USP30-207ENST00000491362 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.36□□□□□ -0.75
USP30-207ENST00000491362 PALD1Q9ULE6 856 aa10.36□□□□□ -0.75
USP30-207ENST00000491362 MGAMO43451 1857 aa10.36□□□□□ -0.75
USP30-207ENST00000491362 MKI67P46013 3256 aaKnown RBP10.35□□□□□ -0.75
USP30-207ENST00000491362 RAB11FIP3O75154 756 aa10.35□□□□□ -0.75
USP30-207ENST00000491362 IDH1O75874 414 aaKnown RBP10.35□□□□□ -0.75
USP30-207ENST00000491362 JAG1P78504 1218 aa10.35□□□□□ -0.75
USP30-207ENST00000491362 TTC6Q86TZ1 520 aa10.35□□□□□ -0.75
USP30-207ENST00000491362 AACSQ86V21 672 aa10.35□□□□□ -0.75
USP30-207ENST00000491362 CLASRPQ8N2M8 674 aaKnown RBP10.35□□□□□ -0.75
USP30-207ENST00000491362 CRACR2BQ8N4Y2 399 aaPredicted RBP10.35□□□□□ -0.75
USP30-207ENST00000491362 PANK1Q8TE04 598 aa10.35□□□□□ -0.75
USP30-207ENST00000491362 U2AF1L4Q8WU68 220 aaKnown RBP10.35□□□□□ -0.75
USP30-207ENST00000491362 C12orf42Q96LP6 360 aa10.35□□□□□ -0.75
USP30-207ENST00000491362 RIOK1Q9BRS2 568 aaKnown RBP10.35□□□□□ -0.75
USP30-207ENST00000491362 CRISPLD2Q9H0B8 497 aa10.35□□□□□ -0.75
USP30-207ENST00000491362 PAK6Q9NQU5 681 aaPredicted RBP10.35□□□□□ -0.75
USP30-207ENST00000491362 TMOD4Q9NZQ9 345 aa10.35□□□□□ -0.75
USP30-207ENST00000491362 SERPINB13Q9UIV8 391 aa10.35□□□□□ -0.75
USP30-207ENST00000491362 GJD2Q9UKL4 321 aa10.35□□□□□ -0.75
USP30-207ENST00000491362 ZBTB21Q9ULJ3 1066 aa10.35□□□□□ -0.75
USP30-207ENST00000491362 EXOC6BQ9Y2D4 811 aa10.35□□□□□ -0.75
USP30-207ENST00000491362 CDK5RAP2Q96SN8 1893 aa10.34□□□□□ -0.75
USP30-207ENST00000491362 INHAP05111 366 aa10.34□□□□□ -0.75
USP30-207ENST00000491362 XRCC5P13010 732 aaKnown RBP10.34□□□□□ -0.75
USP30-207ENST00000491362 FXR2P51116 673 aaKnown RBP eCLIP10.34□□□□□ -0.75
USP30-207ENST00000491362 DYNLL1P63167 89 aaKnown RBP10.34□□□□□ -0.75
USP30-207ENST00000491362 MTMR2Q13614 643 aa10.34□□□□□ -0.75
USP30-207ENST00000491362 MAGEB6Q8N7X4 407 aa10.34□□□□□ -0.75
USP30-207ENST00000491362 HTATIP2Q9BUP3 242 aa10.34□□□□□ -0.75
USP30-207ENST00000491362 TRIM34Q9BYJ4 488 aa10.34□□□□□ -0.75
USP30-207ENST00000491362 ANTXR1Q9H6X2 564 aa10.34□□□□□ -0.75
USP30-207ENST00000491362 BIN2Q9UBW5 565 aaPredicted RBP10.34□□□□□ -0.75
USP30-207ENST00000491362 ATAD5Q96QE3 1844 aa10.34□□□□□ -0.75
USP30-207ENST00000491362 HMGCRP04035 888 aa10.33□□□□□ -0.76
USP30-207ENST00000491362 USP5P45974 858 aa10.33□□□□□ -0.76
USP30-207ENST00000491362 USP14P54578 494 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms