RNA–Protein interactions for RNA: ENST00000491142.1

HPS4-215, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-215ENST00000491142 LDHBP07195 334 aaKnown RBP10.48□□□□□ -0.73
HPS4-215ENST00000491142 TRIM32Q13049 653 aa10.48□□□□□ -0.73
HPS4-215ENST00000491142 TREML2Q5T2D2 321 aa10.48□□□□□ -0.73
HPS4-215ENST00000491142 ANKRD45Q5TZF3 282 aa10.48□□□□□ -0.73
HPS4-215ENST00000491142 COA7Q96BR5 231 aa10.48□□□□□ -0.73
HPS4-215ENST00000491142 MTMR10Q9NXD2 777 aa10.48□□□□□ -0.73
HPS4-215ENST00000491142 STXBP5LQ9Y2K9 1186 aa10.48□□□□□ -0.73
HPS4-215ENST00000491142 DNAH12Q6ZR08 3092 aa10.47□□□□□ -0.73
HPS4-215ENST00000491142 DDTLA6NHG4 134 aaPredicted RBP10.47□□□□□ -0.73
HPS4-215ENST00000491142 SLC5A1P13866 664 aa10.47□□□□□ -0.73
HPS4-215ENST00000491142 MAGEA10P43363 369 aaPredicted RBP10.47□□□□□ -0.73
HPS4-215ENST00000491142 MAP3K10Q02779 954 aa10.47□□□□□ -0.73
HPS4-215ENST00000491142 LRIT3Q3SXY7 679 aa10.47□□□□□ -0.73
HPS4-215ENST00000491142 ZSCAN29Q8IWY8 852 aaPredicted RBP10.47□□□□□ -0.73
HPS4-215ENST00000491142 ANKLE1Q8NAG6 615 aa10.47□□□□□ -0.73
HPS4-215ENST00000491142 LPIN2Q92539 896 aa10.47□□□□□ -0.73
HPS4-215ENST00000491142 MEIS3Q99687 375 aa10.47□□□□□ -0.73
HPS4-215ENST00000491142 COL25A1Q9BXS0 654 aaPredicted RBP10.47□□□□□ -0.73
HPS4-215ENST00000491142 NBPF3Q9H094 633 aa10.47□□□□□ -0.73
HPS4-215ENST00000491142 DAXXQ9UER7 740 aaPredicted RBP10.47□□□□□ -0.73
HPS4-215ENST00000491142 AGTPBP1Q9UPW5 1226 aa10.47□□□□□ -0.73
HPS4-215ENST00000491142 LRRFIP2Q9Y608 721 aaKnown RBP10.47□□□□□ -0.73
HPS4-215ENST00000491142 EYA2O00167 538 aa10.46□□□□□ -0.73
HPS4-215ENST00000491142 CTNND1O60716 968 aaKnown RBP10.46□□□□□ -0.73
HPS4-215ENST00000491142 EIF5BO60841 1220 aaKnown RBP10.46□□□□□ -0.73
HPS4-215ENST00000491142 HMMRO75330 724 aa10.46□□□□□ -0.73
HPS4-215ENST00000491142 ENTPD3O75355 529 aa10.46□□□□□ -0.73
HPS4-215ENST00000491142 HMGCRP04035 888 aa10.46□□□□□ -0.73
HPS4-215ENST00000491142 GNAI3P08754 354 aa10.46□□□□□ -0.73
HPS4-215ENST00000491142 RFX5P48382 616 aaPredicted RBP10.46□□□□□ -0.73
HPS4-215ENST00000491142 BECN1Q14457 450 aa10.46□□□□□ -0.73
HPS4-215ENST00000491142 ATG9AQ7Z3C6 839 aa10.46□□□□□ -0.73
HPS4-215ENST00000491142 ZNF467Q7Z7K2 595 aaPredicted RBP10.46□□□□□ -0.73
HPS4-215ENST00000491142 TDHQ8IZJ6 230 aa10.46□□□□□ -0.73
HPS4-215ENST00000491142 IDI2Q9BXS1 227 aa10.46□□□□□ -0.73
HPS4-215ENST00000491142 C11orf49Q9H6J7 331 aa10.46□□□□□ -0.73
HPS4-215ENST00000491142 HMX1Q9NP08 348 aaPredicted RBP10.46□□□□□ -0.73
HPS4-215ENST00000491142 DDX4Q9NQI0 724 aaKnown RBP10.46□□□□□ -0.73
HPS4-215ENST00000491142 GJD2Q9UKL4 321 aa10.46□□□□□ -0.73
HPS4-215ENST00000491142 RPTORQ8N122 1335 aa10.46□□□□□ -0.73
HPS4-215ENST00000491142 DOCK3Q8IZD9 2030 aa10.46□□□□□ -0.74
HPS4-215ENST00000491142 FAM110CQ1W6H9 321 aa10.45□□□□□ -0.74
HPS4-215ENST00000491142 UBE2OQ9C0C9 1292 aaKnown RBP10.45□□□□□ -0.74
HPS4-215ENST00000491142 USP44Q9H0E7 712 aa10.45□□□□□ -0.74
HPS4-215ENST00000491142 RFX7Q2KHR2 1363 aa10.44□□□□□ -0.74
HPS4-215ENST00000491142 PFASO15067 1338 aa10.44□□□□□ -0.74
HPS4-215ENST00000491142 SALL1Q9NSC2 1324 aa10.44□□□□□ -0.74
HPS4-215ENST00000491142 PRUNE2Q8WUY3 3088 aa10.44□□□□□ -0.74
HPS4-215ENST00000491142 FAM196BA6NMK8 535 aa10.44□□□□□ -0.74
HPS4-215ENST00000491142 GNAI2P04899 355 aa10.44□□□□□ -0.74
HPS4-215ENST00000491142 PHKA1P46020 1223 aa10.44□□□□□ -0.74
HPS4-215ENST00000491142 SPP2Q13103 211 aa10.44□□□□□ -0.74
HPS4-215ENST00000491142 PICALMQ13492 652 aa10.44□□□□□ -0.74
HPS4-215ENST00000491142 IER5LQ5T953 404 aa10.44□□□□□ -0.74
HPS4-215ENST00000491142 C22orf23Q9BZE7 217 aa10.44□□□□□ -0.74
HPS4-215ENST00000491142 PNMA3Q9UL41 463 aa10.44□□□□□ -0.74
HPS4-215ENST00000491142 OGDHLQ9ULD0 1010 aa10.44□□□□□ -0.74
HPS4-215ENST00000491142 SPTBN5Q9NRC6 3674 aaKnown RBP10.44□□□□□ -0.74
HPS4-215ENST00000491142 PTPRFP10586 1907 aa10.43□□□□□ -0.74
HPS4-215ENST00000491142 GAKO14976 1311 aa10.43□□□□□ -0.74
HPS4-215ENST00000491142 PHIPQ8WWQ0 1821 aa10.43□□□□□ -0.74
HPS4-215ENST00000491142 PEX10O60683 326 aa10.43□□□□□ -0.74
HPS4-215ENST00000491142 GCLCP48506 637 aaPredicted RBP10.43□□□□□ -0.74
HPS4-215ENST00000491142 RBM25P49756 843 aaKnown RBP10.43□□□□□ -0.74
HPS4-215ENST00000491142 ATP2B3Q16720 1220 aa10.43□□□□□ -0.74
HPS4-215ENST00000491142 PLEKHM2Q8IWE5 1019 aa10.43□□□□□ -0.74
HPS4-215ENST00000491142 TRIB2Q92519 343 aa10.43□□□□□ -0.74
HPS4-215ENST00000491142 SIL1Q9H173 461 aa10.43□□□□□ -0.74
HPS4-215ENST00000491142 ASCC2Q9H1I8 757 aaPredicted RBP10.43□□□□□ -0.74
HPS4-215ENST00000491142 GNL3LQ9NVN8 582 aaKnown RBP10.43□□□□□ -0.74
HPS4-215ENST00000491142 DENND2AQ9ULE3 1009 aa10.43□□□□□ -0.74
HPS4-215ENST00000491142 MYH13Q9UKX3 1938 aa10.43□□□□□ -0.74
HPS4-215ENST00000491142 DOCK2Q92608 1830 aa10.42□□□□□ -0.74
HPS4-215ENST00000491142 CYP2B6P20813 491 aa10.42□□□□□ -0.74
HPS4-215ENST00000491142 ADORA1P30542 326 aa10.42□□□□□ -0.74
HPS4-215ENST00000491142 BTDP43251 543 aa10.42□□□□□ -0.74
HPS4-215ENST00000491142 HMGCS2P54868 508 aa10.42□□□□□ -0.74
HPS4-215ENST00000491142 MDM2Q00987 491 aaPredicted RBP10.42□□□□□ -0.74
HPS4-215ENST00000491142 RRP1BQ14684 758 aaKnown RBP10.42□□□□□ -0.74
HPS4-215ENST00000491142 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.42□□□□□ -0.74
HPS4-215ENST00000491142 PROCA1Q8NCQ7 364 aaPredicted RBP10.42□□□□□ -0.74
HPS4-215ENST00000491142 ZNF280CQ8ND82 737 aa10.42□□□□□ -0.74
HPS4-215ENST00000491142 GUCD1Q96NT3 240 aa10.42□□□□□ -0.74
HPS4-215ENST00000491142 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.42□□□□□ -0.74
HPS4-215ENST00000491142 CEP126Q9P2H0 1117 aa10.42□□□□□ -0.74
HPS4-215ENST00000491142 DDX60LQ5H9U9 1706 aaKnown RBP10.41□□□□□ -0.74
HPS4-215ENST00000491142 DOCK1Q14185 1865 aa10.41□□□□□ -0.74
HPS4-215ENST00000491142 SEMA3EO15041 775 aa10.41□□□□□ -0.74
HPS4-215ENST00000491142 TBC1D12O60347 775 aa10.41□□□□□ -0.74
HPS4-215ENST00000491142 CDC45O75419 566 aa10.41□□□□□ -0.74
HPS4-215ENST00000491142 COL6A1P12109 1028 aa10.41□□□□□ -0.74
HPS4-215ENST00000491142 MFAP1P55081 439 aaKnown RBP10.41□□□□□ -0.74
HPS4-215ENST00000491142 ATP8B2P98198 1209 aa10.41□□□□□ -0.74
HPS4-215ENST00000491142 LRRC26Q2I0M4 334 aa10.41□□□□□ -0.74
HPS4-215ENST00000491142 TTC22Q5TAA0 569 aa10.41□□□□□ -0.74
HPS4-215ENST00000491142 MAP3K21Q5TCX8 1036 aa10.41□□□□□ -0.74
HPS4-215ENST00000491142 CCDC102BQ68D86 513 aa10.41□□□□□ -0.74
HPS4-215ENST00000491142 DZIP1Q86YF9 867 aaKnown RBP10.41□□□□□ -0.74
HPS4-215ENST00000491142 FAM163AQ96GL9 167 aaPredicted RBP10.41□□□□□ -0.74
HPS4-215ENST00000491142 FAM161BQ96MY7 647 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms