RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 VIMP08670 466 aaKnown RBP12.63□□□□□ -0.39
CRNKL1-204ENST00000490910 ACTN3Q08043 901 aaPredicted RBP12.63□□□□□ -0.39
CRNKL1-204ENST00000490910 COPS6Q7L5N1 327 aa12.63□□□□□ -0.39
CRNKL1-204ENST00000490910 VPS36Q86VN1 386 aa12.63□□□□□ -0.39
CRNKL1-204ENST00000490910 ALDH8A1Q9H2A2 487 aaPredicted RBP12.63□□□□□ -0.39
CRNKL1-204ENST00000490910 RNF41Q9H4P4 317 aaPredicted RBP12.63□□□□□ -0.39
CRNKL1-204ENST00000490910 MAN1B1Q9UKM7 699 aa12.63□□□□□ -0.39
CRNKL1-204ENST00000490910 AATKQ6ZMQ8 1374 aa12.63□□□□□ -0.39
CRNKL1-204ENST00000490910 MINDY4BA8MYZ0 360 aa12.63□□□□□ -0.39
CRNKL1-204ENST00000490910 NEFHP12036 1026 aa12.63□□□□□ -0.39
CRNKL1-204ENST00000490910 TCP1P17987 556 aaKnown RBP12.63□□□□□ -0.39
CRNKL1-204ENST00000490910 KIF23Q02241 960 aaPredicted RBP12.63□□□□□ -0.39
CRNKL1-204ENST00000490910 NNTQ13423 1086 aa12.63□□□□□ -0.39
CRNKL1-204ENST00000490910 IFI16Q16666 785 aaKnown RBP12.63□□□□□ -0.39
CRNKL1-204ENST00000490910 IFT74Q96LB3 600 aa12.63□□□□□ -0.39
CRNKL1-204ENST00000490910 NUP58Q9BVL2 599 aa12.63□□□□□ -0.39
CRNKL1-204ENST00000490910 L1RE1Q9UN81 338 aa12.63□□□□□ -0.39
CRNKL1-204ENST00000490910 MFAP3LO75121 409 aa12.62□□□□□ -0.39
CRNKL1-204ENST00000490910 PRPF4BQ13523 1007 aaKnown RBP12.62□□□□□ -0.39
CRNKL1-204ENST00000490910 MTF1Q14872 753 aa12.62□□□□□ -0.39
CRNKL1-204ENST00000490910 LMNTD2Q8IXW0 634 aa12.62□□□□□ -0.39
CRNKL1-204ENST00000490910 CCDC43Q96MW1 224 aaKnown RBP12.62□□□□□ -0.39
CRNKL1-204ENST00000490910 EXOC1Q9NV70 894 aa12.62□□□□□ -0.39
CRNKL1-204ENST00000490910 TLR7Q9NYK1 1049 aaKnown RBP12.62□□□□□ -0.39
CRNKL1-204ENST00000490910 CLTAP09496 248 aa12.62□□□□□ -0.39
CRNKL1-204ENST00000490910 PCK1P35558 622 aa12.62□□□□□ -0.39
CRNKL1-204ENST00000490910 ATP11AP98196 1134 aa12.62□□□□□ -0.39
CRNKL1-204ENST00000490910 SEPT7Q16181 437 aaKnown RBP12.62□□□□□ -0.39
CRNKL1-204ENST00000490910 CCDC6Q16204 474 aa12.62□□□□□ -0.39
CRNKL1-204ENST00000490910 ALS2CLQ60I27 953 aa12.62□□□□□ -0.39
CRNKL1-204ENST00000490910 KCND1Q9NSA2 647 aa12.62□□□□□ -0.39
CRNKL1-204ENST00000490910 KRT18P05783 430 aaKnown RBP12.62□□□□□ -0.39
CRNKL1-204ENST00000490910 USP14P54578 494 aa12.62□□□□□ -0.39
CRNKL1-204ENST00000490910 BIRC2Q13490 618 aa12.62□□□□□ -0.39
CRNKL1-204ENST00000490910 STAMQ92783 540 aa12.62□□□□□ -0.39
CRNKL1-204ENST00000490910 KAT14Q9H8E8 782 aa12.62□□□□□ -0.39
CRNKL1-204ENST00000490910 BMP2KQ9NSY1 1161 aaPredicted RBP12.62□□□□□ -0.39
CRNKL1-204ENST00000490910 HYOU1Q9Y4L1 999 aa12.62□□□□□ -0.39
CRNKL1-204ENST00000490910 CDC42BPBQ9Y5S2 1711 aa12.62□□□□□ -0.39
CRNKL1-204ENST00000490910 KIF1BO60333 1816 aa12.62□□□□□ -0.39
CRNKL1-204ENST00000490910 MAGEA1P43355 309 aa12.62□□□□□ -0.39
CRNKL1-204ENST00000490910 RNASE9P60153 205 aaKnown RBP12.62□□□□□ -0.39
CRNKL1-204ENST00000490910 TIMM10P62072 90 aa12.62□□□□□ -0.39
CRNKL1-204ENST00000490910 RSRC2Q7L4I2 434 aaKnown RBP12.62□□□□□ -0.39
CRNKL1-204ENST00000490910 FBF1Q8TES7 1133 aa12.62□□□□□ -0.39
CRNKL1-204ENST00000490910 ZHX3Q9H4I2 956 aa12.62□□□□□ -0.39
CRNKL1-204ENST00000490910 CCDC194A0A1B0GVG4 234 aa12.61□□□□□ -0.39
CRNKL1-204ENST00000490910 HSPD1P10809 573 aaKnown RBP12.61□□□□□ -0.39
CRNKL1-204ENST00000490910 ADD1P35611 737 aaKnown RBP12.61□□□□□ -0.39
CRNKL1-204ENST00000490910 CATIPQ7Z7H3 387 aa12.61□□□□□ -0.39
CRNKL1-204ENST00000490910 TMTC2Q8N394 836 aa12.61□□□□□ -0.39
CRNKL1-204ENST00000490910 ENGASEQ8NFI3 743 aa12.61□□□□□ -0.39
CRNKL1-204ENST00000490910 NOX5Q96PH1 765 aa12.61□□□□□ -0.39
CRNKL1-204ENST00000490910 IFIH1Q9BYX4 1025 aaKnown RBP12.61□□□□□ -0.39
CRNKL1-204ENST00000490910 CEP152O94986 1710 aa12.61□□□□□ -0.39
CRNKL1-204ENST00000490910 TARBP1Q13395 1621 aaKnown RBP12.61□□□□□ -0.39
CRNKL1-204ENST00000490910 PREX2Q70Z35 1606 aa12.61□□□□□ -0.39
CRNKL1-204ENST00000490910 SBNO1A3KN83 1393 aa12.61□□□□□ -0.39
CRNKL1-204ENST00000490910 KCNJ18B7U540 433 aa12.61□□□□□ -0.39
CRNKL1-204ENST00000490910 KCNJ12Q14500 433 aa12.61□□□□□ -0.39
CRNKL1-204ENST00000490910 FOXR1Q6PIV2 292 aa12.61□□□□□ -0.39
CRNKL1-204ENST00000490910 NELFBQ8WX92 580 aa12.61□□□□□ -0.39
CRNKL1-204ENST00000490910 RIN2Q8WYP3 895 aaPredicted RBP12.61□□□□□ -0.39
CRNKL1-204ENST00000490910 TAOK3Q9H2K8 898 aa12.61□□□□□ -0.39
CRNKL1-204ENST00000490910 MRPL44Q9H9J2 332 aaKnown RBP12.61□□□□□ -0.39
CRNKL1-204ENST00000490910 KLC4Q9NSK0 619 aa12.61□□□□□ -0.39
CRNKL1-204ENST00000490910 TCP11L1Q9NUJ3 509 aa12.61□□□□□ -0.39
CRNKL1-204ENST00000490910 RNF17Q9BXT8 1623 aaKnown RBP12.61□□□□□ -0.39
CRNKL1-204ENST00000490910 UHRF1BP1LA0JNW5 1464 aa12.61□□□□□ -0.39
CRNKL1-204ENST00000490910 BICDL2A1A5D9 508 aa12.61□□□□□ -0.39
CRNKL1-204ENST00000490910 SMIM23A6NLE4 172 aa12.61□□□□□ -0.39
CRNKL1-204ENST00000490910 MEFVO15553 781 aaPredicted RBP12.61□□□□□ -0.39
CRNKL1-204ENST00000490910 IRAK1P51617 712 aa12.61□□□□□ -0.39
CRNKL1-204ENST00000490910 AMPD3Q01432 767 aa12.61□□□□□ -0.39
CRNKL1-204ENST00000490910 C2orf54Q08AI8 447 aa12.61□□□□□ -0.39
CRNKL1-204ENST00000490910 TRIM65Q6PJ69 517 aa12.61□□□□□ -0.39
CRNKL1-204ENST00000490910 PNKPQ96T60 521 aa12.61□□□□□ -0.39
CRNKL1-204ENST00000490910 KRT23Q9C075 422 aa12.61□□□□□ -0.39
CRNKL1-204ENST00000490910 CNNM2Q9H8M5 875 aa12.61□□□□□ -0.39
CRNKL1-204ENST00000490910 ATP7AQ04656 1500 aa12.61□□□□□ -0.39
CRNKL1-204ENST00000490910 NUTM2BA6NNL0 878 aaPredicted RBP12.6□□□□□ -0.39
CRNKL1-204ENST00000490910 NUTM2EB1AL46 878 aaPredicted RBP12.6□□□□□ -0.39
CRNKL1-204ENST00000490910 NR1D1P20393 614 aa12.6□□□□□ -0.39
CRNKL1-204ENST00000490910 SF3A3Q12874 501 aaKnown RBP eCLIP12.6□□□□□ -0.39
CRNKL1-204ENST00000490910 KRT71Q3SY84 523 aa12.6□□□□□ -0.39
CRNKL1-204ENST00000490910 NOSTRINQ8IVI9 506 aa12.6□□□□□ -0.39
CRNKL1-204ENST00000490910 GSPT2Q8IYD1 628 aaKnown RBP12.6□□□□□ -0.39
CRNKL1-204ENST00000490910 TMEM87BQ96K49 555 aa12.6□□□□□ -0.39
CRNKL1-204ENST00000490910 STMN4Q9H169 189 aaPredicted RBP12.6□□□□□ -0.39
CRNKL1-204ENST00000490910 NDUFA10O95299 355 aa12.6□□□□□ -0.39
CRNKL1-204ENST00000490910 TATP17735 454 aaPredicted RBP12.6□□□□□ -0.39
CRNKL1-204ENST00000490910 COPB1P53618 953 aaKnown RBP12.6□□□□□ -0.39
CRNKL1-204ENST00000490910 MAP3K12Q12852 859 aa12.6□□□□□ -0.39
CRNKL1-204ENST00000490910 PAIP2Q9BPZ3 127 aaKnown RBP12.6□□□□□ -0.39
CRNKL1-204ENST00000490910 NOC4LQ9BVI4 516 aaKnown RBP12.6□□□□□ -0.39
CRNKL1-204ENST00000490910 SEPT11Q9NVA2 429 aaKnown RBP12.6□□□□□ -0.39
CRNKL1-204ENST00000490910 CDK12Q9NYV4 1490 aaPredicted RBP12.6□□□□□ -0.39
CRNKL1-204ENST00000490910 B4E1Z4 1266 aa12.6□□□□□ -0.39
CRNKL1-204ENST00000490910 MORC3Q14149 939 aa12.6□□□□□ -0.39
CRNKL1-204ENST00000490910 EMBQ6PCB8 327 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms