RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 CERKLQ49MI3 558 aaPredicted RBP12.92□□□□□ -0.34
VARS2-210ENST00000490699 ARMC9Q7Z3E5 817 aa12.92□□□□□ -0.34
VARS2-210ENST00000490699 TBC1D10CQ8IV04 446 aa12.92□□□□□ -0.34
VARS2-210ENST00000490699 CDCA5Q96FF9 252 aa12.92□□□□□ -0.34
VARS2-210ENST00000490699 DYNLL2Q96FJ2 89 aa12.92□□□□□ -0.34
VARS2-210ENST00000490699 GLIS2Q9BZE0 524 aaPredicted RBP12.92□□□□□ -0.34
VARS2-210ENST00000490699 SCAF8Q9UPN6 1271 aaKnown RBP12.92□□□□□ -0.34
VARS2-210ENST00000490699 SNX14Q9Y5W7 946 aa12.92□□□□□ -0.34
VARS2-210ENST00000490699 CYP46A1Q9Y6A2 500 aa12.92□□□□□ -0.34
VARS2-210ENST00000490699 POTEMA6NI47 508 aa12.91□□□□□ -0.34
VARS2-210ENST00000490699 ST18O60284 1047 aa12.91□□□□□ -0.34
VARS2-210ENST00000490699 CASTP20810 708 aaKnown RBP12.91□□□□□ -0.34
VARS2-210ENST00000490699 RABEP1Q15276 862 aa12.91□□□□□ -0.34
VARS2-210ENST00000490699 NBPF12Q5TAG4 269 aaPredicted RBP12.91□□□□□ -0.34
VARS2-210ENST00000490699 SH3BP5LQ7L8J4 393 aa12.91□□□□□ -0.34
VARS2-210ENST00000490699 KCNB2Q92953 911 aa12.91□□□□□ -0.34
VARS2-210ENST00000490699 TM6SF1Q9BZW5 370 aa12.91□□□□□ -0.34
VARS2-210ENST00000490699 ZNF408Q9H9D4 720 aa12.91□□□□□ -0.34
VARS2-210ENST00000490699 GINM1Q9NU53 330 aa12.91□□□□□ -0.34
VARS2-210ENST00000490699 POLR2AP24928 1970 aaKnown RBP12.9□□□□□ -0.34
VARS2-210ENST00000490699 B4E1Z4 1266 aa12.9□□□□□ -0.34
VARS2-210ENST00000490699 KDM4AO75164 1064 aa12.9□□□□□ -0.34
VARS2-210ENST00000490699 PRDM1O75626 825 aa12.9□□□□□ -0.34
VARS2-210ENST00000490699 TOMM70O94826 608 aa12.9□□□□□ -0.34
VARS2-210ENST00000490699 ABCB5Q2M3G0 1257 aa12.9□□□□□ -0.34
VARS2-210ENST00000490699 MIGA2Q7L4E1 593 aa12.9□□□□□ -0.34
VARS2-210ENST00000490699 C2orf69Q8N8R5 385 aa12.9□□□□□ -0.34
VARS2-210ENST00000490699 TEPSINQ96N21 525 aa12.9□□□□□ -0.34
VARS2-210ENST00000490699 PICK1Q9NRD5 415 aa12.9□□□□□ -0.34
VARS2-210ENST00000490699 CSADQ9Y600 493 aa12.9□□□□□ -0.34
VARS2-210ENST00000490699 NEDD4P46934 1319 aa12.89□□□□□ -0.35
VARS2-210ENST00000490699 ASNSP08243 561 aa12.89□□□□□ -0.35
VARS2-210ENST00000490699 POTEJP0CG39 1038 aa12.89□□□□□ -0.35
VARS2-210ENST00000490699 FKBP1BP68106 108 aa12.89□□□□□ -0.35
VARS2-210ENST00000490699 TFAP4Q01664 338 aa12.89□□□□□ -0.35
VARS2-210ENST00000490699 GABPAQ06546 454 aa12.89□□□□□ -0.35
VARS2-210ENST00000490699 ANKRD1Q15327 319 aa12.89□□□□□ -0.35
VARS2-210ENST00000490699 PRAMEF18Q5VWM3 479 aa12.89□□□□□ -0.35
VARS2-210ENST00000490699 TMEM179Q6ZVK1 233 aa12.89□□□□□ -0.35
VARS2-210ENST00000490699 DHX32Q7L7V1 743 aaKnown RBP12.89□□□□□ -0.35
VARS2-210ENST00000490699 METTL16Q86W50 562 aaKnown RBP12.89□□□□□ -0.35
VARS2-210ENST00000490699 RASEFQ8IZ41 740 aa12.89□□□□□ -0.35
VARS2-210ENST00000490699 SLC44A5Q8NCS7 719 aa12.89□□□□□ -0.35
VARS2-210ENST00000490699 RBM46Q8TBY0 533 aaKnown RBP12.89□□□□□ -0.35
VARS2-210ENST00000490699 TMEM87BQ96K49 555 aa12.89□□□□□ -0.35
VARS2-210ENST00000490699 WRNIP1Q96S55 665 aa12.89□□□□□ -0.35
VARS2-210ENST00000490699 MTA3Q9BTC8 594 aa12.89□□□□□ -0.35
VARS2-210ENST00000490699 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.89□□□□□ -0.35
VARS2-210ENST00000490699 WDR19Q8NEZ3 1342 aa12.88□□□□□ -0.35
VARS2-210ENST00000490699 FAM196BA6NMK8 535 aa12.88□□□□□ -0.35
VARS2-210ENST00000490699 IFIT3O14879 490 aaKnown RBP12.88□□□□□ -0.35
VARS2-210ENST00000490699 PRC1O43663 620 aa12.88□□□□□ -0.35
VARS2-210ENST00000490699 CTNND1O60716 968 aaKnown RBP12.88□□□□□ -0.35
VARS2-210ENST00000490699 FGRP09769 529 aa12.88□□□□□ -0.35
VARS2-210ENST00000490699 RASA1P20936 1047 aa12.88□□□□□ -0.35
VARS2-210ENST00000490699 SHMT1P34896 483 aa12.88□□□□□ -0.35
VARS2-210ENST00000490699 PRKG1Q13976 671 aa12.88□□□□□ -0.35
VARS2-210ENST00000490699 TATDN1Q6P1N9 297 aa12.88□□□□□ -0.35
VARS2-210ENST00000490699 SYNE3Q6ZMZ3 975 aa12.88□□□□□ -0.35
VARS2-210ENST00000490699 RUFY3Q7L099 469 aa12.88□□□□□ -0.35
VARS2-210ENST00000490699 TMTC2Q8N394 836 aa12.88□□□□□ -0.35
VARS2-210ENST00000490699 ZNF784Q8NCA9 323 aaPredicted RBP12.88□□□□□ -0.35
VARS2-210ENST00000490699 OTUD5Q96G74 571 aa12.88□□□□□ -0.35
VARS2-210ENST00000490699 NBPF3Q9H094 633 aa12.88□□□□□ -0.35
VARS2-210ENST00000490699 SH2D4AQ9H788 454 aa12.88□□□□□ -0.35
VARS2-210ENST00000490699 ANGEL1Q9UNK9 670 aaKnown RBP12.88□□□□□ -0.35
VARS2-210ENST00000490699 KIF3CO14782 793 aa12.87□□□□□ -0.35
VARS2-210ENST00000490699 CELF2O95319 508 aaKnown RBP12.87□□□□□ -0.35
VARS2-210ENST00000490699 RPS6KB1P23443 525 aa12.87□□□□□ -0.35
VARS2-210ENST00000490699 CAP2P40123 477 aa12.87□□□□□ -0.35
VARS2-210ENST00000490699 NEK4P51957 841 aa12.87□□□□□ -0.35
VARS2-210ENST00000490699 MAP3K10Q02779 954 aa12.87□□□□□ -0.35
VARS2-210ENST00000490699 FSTL1Q12841 308 aa12.87□□□□□ -0.35
VARS2-210ENST00000490699 RAB3GAP1Q15042 981 aa12.87□□□□□ -0.35
VARS2-210ENST00000490699 TMEM67Q5HYA8 995 aa12.87□□□□□ -0.35
VARS2-210ENST00000490699 FAM47AQ5JRC9 791 aa12.87□□□□□ -0.35
VARS2-210ENST00000490699 NFXL1Q6ZNB6 911 aa12.87□□□□□ -0.35
VARS2-210ENST00000490699 ANKRD13AQ8IZ07 590 aa12.87□□□□□ -0.35
VARS2-210ENST00000490699 TBC1D2Q9BYX2 928 aa12.87□□□□□ -0.35
VARS2-210ENST00000490699 KANSL2Q9H9L4 492 aa12.87□□□□□ -0.35
VARS2-210ENST00000490699 AS3MTQ9HBK9 375 aa12.87□□□□□ -0.35
VARS2-210ENST00000490699 ARHGEF10LQ9HCE6 1279 aa12.87□□□□□ -0.35
VARS2-210ENST00000490699 GBA2Q9HCG7 927 aaPredicted RBP12.87□□□□□ -0.35
VARS2-210ENST00000490699 ZSWIM6Q9HCJ5 1215 aa12.87□□□□□ -0.35
VARS2-210ENST00000490699 PDRG1Q9NUG6 133 aa12.87□□□□□ -0.35
VARS2-210ENST00000490699 SIPA1L1O43166 1804 aa12.87□□□□□ -0.35
VARS2-210ENST00000490699 PAPPA2Q9BXP8 1791 aa12.86□□□□□ -0.35
VARS2-210ENST00000490699 PLIN4Q96Q06 1357 aa12.86□□□□□ -0.35
VARS2-210ENST00000490699 CCDC69A6NI79 296 aa12.86□□□□□ -0.35
VARS2-210ENST00000490699 UNCXA6NJT0 531 aa12.86□□□□□ -0.35
VARS2-210ENST00000490699 TRAF5O00463 557 aa12.86□□□□□ -0.35
VARS2-210ENST00000490699 GDF11O95390 407 aa12.86□□□□□ -0.35
VARS2-210ENST00000490699 ANP32AP39687 249 aaKnown RBP12.86□□□□□ -0.35
VARS2-210ENST00000490699 MCM2P49736 904 aa12.86□□□□□ -0.35
VARS2-210ENST00000490699 MAP3K9P80192 1104 aa12.86□□□□□ -0.35
VARS2-210ENST00000490699 ATP2B2Q01814 1243 aa12.86□□□□□ -0.35
VARS2-210ENST00000490699 WTAPQ15007 396 aa12.86□□□□□ -0.35
VARS2-210ENST00000490699 ADCK5Q3MIX3 580 aa12.86□□□□□ -0.35
VARS2-210ENST00000490699 IFIT1BQ5T764 474 aaKnown RBP12.86□□□□□ -0.35
VARS2-210ENST00000490699 STOX1Q6ZVD7 989 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms