RNA–Protein interactions for RNA: ENST00000490111.1

RTN1-207, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-207ENST00000490111 LDHAP00338 332 aaKnown RBP5.53□□□□□ -1.52
RTN1-207ENST00000490111 EGFRP00533 1210 aa5.53□□□□□ -1.52
RTN1-207ENST00000490111 MYCP01106 439 aaPredicted RBP5.53□□□□□ -1.52
RTN1-207ENST00000490111 IL6STP40189 918 aaPredicted RBP5.53□□□□□ -1.52
RTN1-207ENST00000490111 MAP3K12Q12852 859 aa5.53□□□□□ -1.52
RTN1-207ENST00000490111 PAK2Q13177 524 aa5.53□□□□□ -1.52
RTN1-207ENST00000490111 OS9Q13438 667 aaPredicted RBP5.53□□□□□ -1.52
RTN1-207ENST00000490111 LRIT3Q3SXY7 679 aa5.53□□□□□ -1.52
RTN1-207ENST00000490111 MOB2Q70IA6 237 aa5.53□□□□□ -1.52
RTN1-207ENST00000490111 TPCN2Q8NHX9 752 aa5.53□□□□□ -1.52
RTN1-207ENST00000490111 DPF2Q92785 391 aa5.53□□□□□ -1.52
RTN1-207ENST00000490111 GPRASP2Q96D09 838 aa5.53□□□□□ -1.52
RTN1-207ENST00000490111 KANSL2Q9H9L4 492 aa5.53□□□□□ -1.52
RTN1-207ENST00000490111 SLC52A2Q9HAB3 445 aa5.53□□□□□ -1.52
RTN1-207ENST00000490111 FKBPLQ9UIM3 349 aa5.53□□□□□ -1.52
RTN1-207ENST00000490111 ZNF609O15014 1411 aa5.53□□□□□ -1.52
RTN1-207ENST00000490111 POLR2AP24928 1970 aaKnown RBP5.53□□□□□ -1.52
RTN1-207ENST00000490111 IFRD1O00458 451 aaPredicted RBP5.52□□□□□ -1.53
RTN1-207ENST00000490111 LGR5O75473 907 aa5.52□□□□□ -1.53
RTN1-207ENST00000490111 FGAP02671 866 aa5.52□□□□□ -1.53
RTN1-207ENST00000490111 PRKAR2AP13861 404 aaKnown RBP5.52□□□□□ -1.53
RTN1-207ENST00000490111 HOXA10P31260 410 aaPredicted RBP5.52□□□□□ -1.53
RTN1-207ENST00000490111 BMP8BP34820 402 aa5.52□□□□□ -1.53
RTN1-207ENST00000490111 MASP1P48740 699 aa5.52□□□□□ -1.53
RTN1-207ENST00000490111 INHBEP58166 350 aa5.52□□□□□ -1.53
RTN1-207ENST00000490111 GTF2IP78347 998 aa5.52□□□□□ -1.53
RTN1-207ENST00000490111 CRY2Q49AN0 593 aa5.52□□□□□ -1.53
RTN1-207ENST00000490111 CCDC102BQ68D86 513 aa5.52□□□□□ -1.53
RTN1-207ENST00000490111 ALG1LQ6GMV1 187 aa5.52□□□□□ -1.53
RTN1-207ENST00000490111 HS2ST1Q7LGA3 356 aa5.52□□□□□ -1.53
RTN1-207ENST00000490111 DZIP3Q86Y13 1208 aaKnown RBP5.52□□□□□ -1.53
RTN1-207ENST00000490111 CACTIN-AS1Q8N1I8 211 aa5.52□□□□□ -1.53
RTN1-207ENST00000490111 SAMD3Q8N6K7 520 aa5.52□□□□□ -1.53
RTN1-207ENST00000490111 SUPT20HQ8NEM7 779 aa5.52□□□□□ -1.53
RTN1-207ENST00000490111 SH3TC2Q8TF17 1288 aa5.52□□□□□ -1.53
RTN1-207ENST00000490111 DEPDC7Q96QD5 511 aa5.52□□□□□ -1.53
RTN1-207ENST00000490111 TMX4Q9H1E5 349 aaPredicted RBP5.52□□□□□ -1.53
RTN1-207ENST00000490111 LGR6Q9HBX8 967 aa5.52□□□□□ -1.53
RTN1-207ENST00000490111 HOMER2Q9NSB8 354 aa5.52□□□□□ -1.53
RTN1-207ENST00000490111 KDM3BQ7LBC6 1761 aa5.52□□□□□ -1.53
RTN1-207ENST00000490111 CEP290O15078 2479 aa5.51□□□□□ -1.53
RTN1-207ENST00000490111 FAM221BA6H8Z2 402 aa5.51□□□□□ -1.53
RTN1-207ENST00000490111 FAM177BA6PVY3 158 aa5.51□□□□□ -1.53
RTN1-207ENST00000490111 G3V3G9 751 aa5.51□□□□□ -1.53
RTN1-207ENST00000490111 PPEF1O14829 653 aaPredicted RBP5.51□□□□□ -1.53
RTN1-207ENST00000490111 PLIN1O60240 522 aa5.51□□□□□ -1.53
RTN1-207ENST00000490111 FZD6O60353 706 aa5.51□□□□□ -1.53
RTN1-207ENST00000490111 HSPA5P11021 654 aaKnown RBP5.51□□□□□ -1.53
RTN1-207ENST00000490111 GTF2E1P29083 439 aaPredicted RBP5.51□□□□□ -1.53
RTN1-207ENST00000490111 NOS2P35228 1153 aa5.51□□□□□ -1.53
RTN1-207ENST00000490111 BCAMP50895 628 aa5.51□□□□□ -1.53
RTN1-207ENST00000490111 SP3Q02447 781 aa5.51□□□□□ -1.53
RTN1-207ENST00000490111 POU5F1BQ06416 359 aa5.51□□□□□ -1.53
RTN1-207ENST00000490111 MYBPC2Q14324 1141 aa5.51□□□□□ -1.53
RTN1-207ENST00000490111 NAA30Q147X3 362 aaPredicted RBP5.51□□□□□ -1.53
RTN1-207ENST00000490111 TSGA10IPQ3SY00 556 aa5.51□□□□□ -1.53
RTN1-207ENST00000490111 SULT6B1Q6IMI4 303 aa5.51□□□□□ -1.53
RTN1-207ENST00000490111 LRP10Q7Z4F1 713 aa5.51□□□□□ -1.53
RTN1-207ENST00000490111 UBE2Q1Q7Z7E8 422 aa5.51□□□□□ -1.53
RTN1-207ENST00000490111 SLC51AQ86UW1 340 aa5.51□□□□□ -1.53
RTN1-207ENST00000490111 PGBD3Q8N328 593 aa5.51□□□□□ -1.53
RTN1-207ENST00000490111 RASGRP4Q8TDF6 673 aa5.51□□□□□ -1.53
RTN1-207ENST00000490111 APPBP2Q92624 585 aa5.51□□□□□ -1.53
RTN1-207ENST00000490111 RPGRQ92834 1020 aaKnown RBP5.51□□□□□ -1.53
RTN1-207ENST00000490111 SHISA4Q96DD7 197 aa5.51□□□□□ -1.53
RTN1-207ENST00000490111 CCDC85AQ96PX6 553 aaPredicted RBP5.51□□□□□ -1.53
RTN1-207ENST00000490111 TEX13AQ9BXU3 409 aaPredicted RBP5.51□□□□□ -1.53
RTN1-207ENST00000490111 RTFDC1Q9BY42 306 aaPredicted RBP5.51□□□□□ -1.53
RTN1-207ENST00000490111 PANK3Q9H999 370 aa5.51□□□□□ -1.53
RTN1-207ENST00000490111 AVENQ9NQS1 362 aaPredicted RBP5.51□□□□□ -1.53
RTN1-207ENST00000490111 GGA3Q9NZ52 723 aa5.51□□□□□ -1.53
RTN1-207ENST00000490111 CNTN3Q9P232 1028 aa5.51□□□□□ -1.53
RTN1-207ENST00000490111 TRIM35Q9UPQ4 493 aa5.51□□□□□ -1.53
RTN1-207ENST00000490111 PTCH2Q9Y6C5 1203 aa5.51□□□□□ -1.53
RTN1-207ENST00000490111 KIAA0100Q14667 2235 aaKnown RBP5.51□□□□□ -1.53
RTN1-207ENST00000490111 KIF7Q2M1P5 1343 aa5.5□□□□□ -1.53
RTN1-207ENST00000490111 PNMA6FA0A0J9YX94 578 aa5.5□□□□□ -1.53
RTN1-207ENST00000490111 ESYT3A0FGR9 886 aa5.5□□□□□ -1.53
RTN1-207ENST00000490111 MANSC4A6NHS7 340 aaPredicted RBP5.5□□□□□ -1.53
RTN1-207ENST00000490111 YDJCA8MPS7 323 aa5.5□□□□□ -1.53
RTN1-207ENST00000490111 ZBTB24O43167 697 aaPredicted RBP5.5□□□□□ -1.53
RTN1-207ENST00000490111 KLF4O43474 513 aa5.5□□□□□ -1.53
RTN1-207ENST00000490111 TSPAN6O43657 245 aa5.5□□□□□ -1.53
RTN1-207ENST00000490111 ZNF500O60304 480 aaPredicted RBP5.5□□□□□ -1.53
RTN1-207ENST00000490111 CAND2O75155 1236 aa5.5□□□□□ -1.53
RTN1-207ENST00000490111 HMOX1P09601 288 aa5.5□□□□□ -1.53
RTN1-207ENST00000490111 CD53P19397 219 aa5.5□□□□□ -1.53
RTN1-207ENST00000490111 MZF1P28698 734 aaPredicted RBP5.5□□□□□ -1.53
RTN1-207ENST00000490111 CDKN1CP49918 316 aaPredicted RBP5.5□□□□□ -1.53
RTN1-207ENST00000490111 CHMP4BP1P59074 171 aa5.5□□□□□ -1.53
RTN1-207ENST00000490111 CAP1Q01518 475 aa5.5□□□□□ -1.53
RTN1-207ENST00000490111 EXOSC10Q01780 885 aaKnown RBP5.5□□□□□ -1.53
RTN1-207ENST00000490111 KIAA2012Q0VF49 1180 aa5.5□□□□□ -1.53
RTN1-207ENST00000490111 TCIRG1Q13488 830 aa5.5□□□□□ -1.53
RTN1-207ENST00000490111 HDAC1Q13547 482 aaPredicted RBP5.5□□□□□ -1.53
RTN1-207ENST00000490111 ARHGEF6Q15052 776 aa5.5□□□□□ -1.53
RTN1-207ENST00000490111 NFE2Q16621 373 aaPredicted RBP5.5□□□□□ -1.53
RTN1-207ENST00000490111 KIF4BQ2VIQ3 1234 aa5.5□□□□□ -1.53
RTN1-207ENST00000490111 BRDTQ58F21 947 aaPredicted RBP5.5□□□□□ -1.53
RTN1-207ENST00000490111 ANGEL2Q5VTE6 544 aaKnown RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms