RNA–Protein interactions for RNA: ENST00000489783.1

SHOC2-206, Transcript of SHOC2, leucine rich repeat scaffold protein, humanhuman

TSL 2

Gene SHOC2, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOC2-206ENST00000489783 SHROOM1Q2M3G4 852 aaPredicted RBP27.65■■■□□ 2.02
SHOC2-206ENST00000489783 SSH1Q8WYL5 1049 aa27.65■■■□□ 2.02
SHOC2-206ENST00000489783 APBA2Q99767 749 aa27.65■■■□□ 2.02
SHOC2-206ENST00000489783 HERC5Q9UII4 1024 aaKnown RBP27.65■■■□□ 2.02
SHOC2-206ENST00000489783 TBC1D9Q6ZT07 1266 aa27.64■■■□□ 2.02
SHOC2-206ENST00000489783 CCAR1Q8IX12 1150 aaKnown RBP27.64■■■□□ 2.02
SHOC2-206ENST00000489783 NSUN4Q96CB9 384 aaKnown RBP27.64■■■□□ 2.02
SHOC2-206ENST00000489783 PAGR1Q9BTK6 254 aa27.64■■■□□ 2.02
SHOC2-206ENST00000489783 FLRT1Q9NZU1 646 aa27.64■■■□□ 2.02
SHOC2-206ENST00000489783 MAP4K4O95819 1239 aaPredicted RBP27.63■■■□□ 2.01
SHOC2-206ENST00000489783 MYLIPQ8WY64 445 aa27.63■■■□□ 2.01
SHOC2-206ENST00000489783 XAGE2Q96GT9 111 aa27.63■■■□□ 2.01
SHOC2-206ENST00000489783 C19orf81C9J6K1 198 aa27.62■■■□□ 2.01
SHOC2-206ENST00000489783 LDHCP07864 332 aa27.62■■■□□ 2.01
SHOC2-206ENST00000489783 C9orf50Q5SZB4 431 aa27.62■■■□□ 2.01
SHOC2-206ENST00000489783 PI4KBQ9UBF8 816 aa27.62■■■□□ 2.01
SHOC2-206ENST00000489783 UBTFL1P0CB47 393 aaPredicted RBP27.61■■■□□ 2.01
SHOC2-206ENST00000489783 MAP2K5Q13163 448 aa27.61■■■□□ 2.01
SHOC2-206ENST00000489783 PI16Q6UXB8 463 aa27.61■■■□□ 2.01
SHOC2-206ENST00000489783 TEX11Q8IYF3 940 aa27.61■■■□□ 2.01
SHOC2-206ENST00000489783 TTYH1Q9H313 450 aaPredicted RBP27.61■■■□□ 2.01
SHOC2-206ENST00000489783 COPRSQ9NQ92 184 aa27.61■■■□□ 2.01
SHOC2-206ENST00000489783 HMG20BQ9P0W2 317 aa27.61■■■□□ 2.01
SHOC2-206ENST00000489783 NDUFB9Q9Y6M9 179 aa27.61■■■□□ 2.01
SHOC2-206ENST00000489783 A0A1B0GUL7 405 aa27.6■■■□□ 2.01
SHOC2-206ENST00000489783 USP17L10C9JJH3 530 aa27.6■■■□□ 2.01
SHOC2-206ENST00000489783 ASNSP08243 561 aa27.6■■■□□ 2.01
SHOC2-206ENST00000489783 RTP1P59025 263 aa27.6■■■□□ 2.01
SHOC2-206ENST00000489783 GSTO1P78417 241 aa27.6■■■□□ 2.01
SHOC2-206ENST00000489783 SH3RF3Q8TEJ3 882 aaPredicted RBP27.6■■■□□ 2.01
SHOC2-206ENST00000489783 EDC3Q96F86 508 aaKnown RBP27.6■■■□□ 2.01
SHOC2-206ENST00000489783 DNAJC18Q9H819 358 aa27.6■■■□□ 2.01
SHOC2-206ENST00000489783 DDX20Q9UHI6 824 aaKnown RBP27.6■■■□□ 2.01
SHOC2-206ENST00000489783 MAST2Q6P0Q8 1798 aa27.59■■■□□ 2.01
SHOC2-206ENST00000489783 MFSD14CQ5VZR4 134 aa27.59■■■□□ 2.01
SHOC2-206ENST00000489783 EMILIN3Q9NT22 766 aa27.59■■■□□ 2.01
SHOC2-206ENST00000489783 PRKAG2Q9UGJ0 569 aa27.59■■■□□ 2.01
SHOC2-206ENST00000489783 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.59■■■□□ 2.01
SHOC2-206ENST00000489783 CNMDO75829 334 aa27.58■■■□□ 2.01
SHOC2-206ENST00000489783 LPAR1Q92633 364 aa27.58■■■□□ 2.01
SHOC2-206ENST00000489783 FRMPD3Q5JV73 1810 aa27.57■■■□□ 2
SHOC2-206ENST00000489783 CNGA1P29973 690 aa27.57■■■□□ 2
SHOC2-206ENST00000489783 TFCP2Q12800 502 aa27.57■■■□□ 2
SHOC2-206ENST00000489783 MVPQ14764 893 aaKnown RBP27.57■■■□□ 2
SHOC2-206ENST00000489783 SPATA5Q8NB90 893 aa27.57■■■□□ 2
SHOC2-206ENST00000489783 RAI14Q9P0K7 980 aa27.57■■■□□ 2
SHOC2-206ENST00000489783 ATP11BQ9Y2G3 1177 aa27.57■■■□□ 2
SHOC2-206ENST00000489783 DNM1LO00429 736 aa27.56■■■□□ 2
SHOC2-206ENST00000489783 GDF11O95390 407 aa27.56■■■□□ 2
SHOC2-206ENST00000489783 TRPV1Q8NER1 839 aa27.56■■■□□ 2
SHOC2-206ENST00000489783 GTF3C2Q8WUA4 911 aaPredicted RBP27.56■■■□□ 2
SHOC2-206ENST00000489783 DHX36Q9H2U1 1008 aaKnown RBP27.56■■■□□ 2
SHOC2-206ENST00000489783 CWC22Q9HCG8 908 aaKnown RBP27.56■■■□□ 2
SHOC2-206ENST00000489783 SIPA1L1O43166 1804 aa27.55■■■□□ 2
SHOC2-206ENST00000489783 METTL16Q86W50 562 aaKnown RBP27.55■■■□□ 2
SHOC2-206ENST00000489783 RABGAP1Q9Y3P9 1069 aa27.55■■■□□ 2
SHOC2-206ENST00000489783 ZNF521Q96K83 1311 aa27.55■■■□□ 2
SHOC2-206ENST00000489783 LTBP2Q14767 1821 aa27.55■■■□□ 2
SHOC2-206ENST00000489783 CDH23Q9H251 3354 aa27.54■■■□□ 2
SHOC2-206ENST00000489783 CYP2C19P33261 490 aa27.54■■■□□ 2
SHOC2-206ENST00000489783 SMAD3P84022 425 aaKnown RBP27.54■■■□□ 2
SHOC2-206ENST00000489783 GJC2Q5T442 439 aaPredicted RBP27.54■■■□□ 2
SHOC2-206ENST00000489783 FOXP4Q8IVH2 680 aaPredicted RBP27.54■■■□□ 2
SHOC2-206ENST00000489783 NPLOC4Q8TAT6 608 aa27.54■■■□□ 2
SHOC2-206ENST00000489783 BADQ92934 168 aa27.54■■■□□ 2
SHOC2-206ENST00000489783 NEUROD6Q96NK8 337 aa27.54■■■□□ 2
SHOC2-206ENST00000489783 ZBTB21Q9ULJ3 1066 aa27.54■■■□□ 2
SHOC2-206ENST00000489783 AKAP2Q9Y2D5 859 aa27.54■■■□□ 2
SHOC2-206ENST00000489783 SLC15A5A6NIM6 579 aa27.53■■■□□ 2
SHOC2-206ENST00000489783 MSCO60682 206 aa27.53■■■□□ 2
SHOC2-206ENST00000489783 PTPREP23469 700 aa27.53■■■□□ 2
SHOC2-206ENST00000489783 ATP2B2Q01814 1243 aa27.53■■■□□ 2
SHOC2-206ENST00000489783 USP17L2Q6R6M4 530 aa27.53■■■□□ 2
SHOC2-206ENST00000489783 FOSL2P15408 326 aa27.52■■■□□ 2
SHOC2-206ENST00000489783 WDR78Q5VTH9 848 aa27.52■■■□□ 2
SHOC2-206ENST00000489783 SLC39A5Q6ZMH5 540 aa27.52■■■□□ 2
SHOC2-206ENST00000489783 MAPKAPK5Q8IW41 473 aa27.52■■■□□ 2
SHOC2-206ENST00000489783 TGFBRAP1Q8WUH2 860 aa27.52■■■□□ 2
SHOC2-206ENST00000489783 SYMPKQ92797 1274 aaKnown RBP27.52■■■□□ 2
SHOC2-206ENST00000489783 PRDM5Q9NQX1 630 aaPredicted RBP27.52■■■□□ 2
SHOC2-206ENST00000489783 PALD1Q9ULE6 856 aa27.52■■■□□ 2
SHOC2-206ENST00000489783 GLRX3O76003 335 aaKnown RBP27.51■■□□□ 1.99
SHOC2-206ENST00000489783 IGHA2P01877 340 aa27.51■■□□□ 1.99
SHOC2-206ENST00000489783 HOXC6P09630 235 aa27.51■■□□□ 1.99
SHOC2-206ENST00000489783 COL9A1P20849 921 aa27.51■■□□□ 1.99
SHOC2-206ENST00000489783 GINM1Q9NU53 330 aa27.51■■□□□ 1.99
SHOC2-206ENST00000489783 AATFQ9NY61 560 aaKnown RBP eCLIP27.51■■□□□ 1.99
SHOC2-206ENST00000489783 CCNA1P78396 465 aa27.5■■□□□ 1.99
SHOC2-206ENST00000489783 SH3RF1Q7Z6J0 888 aa27.5■■□□□ 1.99
SHOC2-206ENST00000489783 CRACR2BQ8N4Y2 399 aaPredicted RBP27.5■■□□□ 1.99
SHOC2-206ENST00000489783 LRP2BPQ9P2M1 347 aa27.5■■□□□ 1.99
SHOC2-206ENST00000489783 TRIM60Q495X7 471 aa27.49■■□□□ 1.99
SHOC2-206ENST00000489783 BTBD7Q9P203 1132 aa27.49■■□□□ 1.99
SHOC2-206ENST00000489783 FLT1P17948 1338 aa27.48■■□□□ 1.99
SHOC2-206ENST00000489783 TRIM43BA6NCK2 446 aa27.48■■□□□ 1.99
SHOC2-206ENST00000489783 USP17L15C9J2P7 530 aa27.48■■□□□ 1.99
SHOC2-206ENST00000489783 USP17L13C9JLJ4 530 aa27.48■■□□□ 1.99
SHOC2-206ENST00000489783 USP17L11C9JVI0 530 aa27.48■■□□□ 1.99
SHOC2-206ENST00000489783 USP17L18D6R9N7 530 aa27.48■■□□□ 1.99
SHOC2-206ENST00000489783 USP17L22D6RA61 530 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms