RNA–Protein interactions for RNA: ENST00000489556.5

CNIH3-209, Transcript of cornichon family AMPA receptor auxiliary protein 3, humanhuman

TSL 5

Gene CNIH3, Length 866 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3-209ENST00000489556 LAMB1P07942 1786 aa10.18□□□□□ -0.78
CNIH3-209ENST00000489556 MYH8P13535 1937 aa10.17□□□□□ -0.78
CNIH3-209ENST00000489556 SMIM22K7EJ46 135 aa10.17□□□□□ -0.78
CNIH3-209ENST00000489556 EPB41L2O43491 1005 aaKnown RBP10.17□□□□□ -0.78
CNIH3-209ENST00000489556 CYP21A2P08686 494 aa10.17□□□□□ -0.78
CNIH3-209ENST00000489556 PSMA5P28066 241 aa10.17□□□□□ -0.78
CNIH3-209ENST00000489556 FKBP1BP68106 108 aa10.17□□□□□ -0.78
CNIH3-209ENST00000489556 TFAP4Q01664 338 aa10.17□□□□□ -0.78
CNIH3-209ENST00000489556 ATP2B2Q01814 1243 aa10.17□□□□□ -0.78
CNIH3-209ENST00000489556 NECTIN1Q15223 517 aa10.17□□□□□ -0.78
CNIH3-209ENST00000489556 FAM47AQ5JRC9 791 aa10.17□□□□□ -0.78
CNIH3-209ENST00000489556 ANKRD13AQ8IZ07 590 aa10.17□□□□□ -0.78
CNIH3-209ENST00000489556 NCOA7Q8NI08 942 aa10.17□□□□□ -0.78
CNIH3-209ENST00000489556 ZKSCAN4Q969J2 545 aaPredicted RBP10.17□□□□□ -0.78
CNIH3-209ENST00000489556 CCDC17Q96LX7 622 aa10.17□□□□□ -0.78
CNIH3-209ENST00000489556 BACH2Q9BYV9 841 aa10.17□□□□□ -0.78
CNIH3-209ENST00000489556 TRPM7Q96QT4 1865 aa10.17□□□□□ -0.78
CNIH3-209ENST00000489556 ERICH2A1L162 156 aa10.16□□□□□ -0.78
CNIH3-209ENST00000489556 TMEM88BA6NKF7 163 aa10.16□□□□□ -0.78
CNIH3-209ENST00000489556 B4E1Z4 1266 aa10.16□□□□□ -0.78
CNIH3-209ENST00000489556 E7EWF7 191 aa10.16□□□□□ -0.78
CNIH3-209ENST00000489556 RAD21O60216 631 aa10.16□□□□□ -0.78
CNIH3-209ENST00000489556 CTNND1O60716 968 aaKnown RBP10.16□□□□□ -0.78
CNIH3-209ENST00000489556 GH2P01242 217 aa10.16□□□□□ -0.78
CNIH3-209ENST00000489556 PCP11498 1178 aaKnown RBP10.16□□□□□ -0.78
CNIH3-209ENST00000489556 INPP5BP32019 993 aa10.16□□□□□ -0.78
CNIH3-209ENST00000489556 SHMT1P34896 483 aa10.16□□□□□ -0.78
CNIH3-209ENST00000489556 HSPA4P34932 840 aa10.16□□□□□ -0.78
CNIH3-209ENST00000489556 HUNKP57058 714 aa10.16□□□□□ -0.78
CNIH3-209ENST00000489556 GRM1Q13255 1194 aa10.16□□□□□ -0.78
CNIH3-209ENST00000489556 IQCA1Q86XH1 822 aa10.16□□□□□ -0.78
CNIH3-209ENST00000489556 STAG1Q8WVM7 1258 aa10.16□□□□□ -0.78
CNIH3-209ENST00000489556 KLRG1Q96E93 195 aa10.16□□□□□ -0.78
CNIH3-209ENST00000489556 JAKMIP1Q96N16 626 aaKnown RBP10.16□□□□□ -0.78
CNIH3-209ENST00000489556 NEK1Q96PY6 1258 aa10.16□□□□□ -0.78
CNIH3-209ENST00000489556 UBAC1Q9BSL1 405 aa10.16□□□□□ -0.78
CNIH3-209ENST00000489556 C22orf23Q9BZE7 217 aa10.16□□□□□ -0.78
CNIH3-209ENST00000489556 ELP3Q9H9T3 547 aa10.16□□□□□ -0.78
CNIH3-209ENST00000489556 TAOK2Q9UL54 1235 aa10.16□□□□□ -0.78
CNIH3-209ENST00000489556 KDM4AO75164 1064 aa10.15□□□□□ -0.78
CNIH3-209ENST00000489556 ASNSP08243 561 aa10.15□□□□□ -0.78
CNIH3-209ENST00000489556 AKR1B1P15121 316 aa10.15□□□□□ -0.78
CNIH3-209ENST00000489556 CAP2P40123 477 aa10.15□□□□□ -0.78
CNIH3-209ENST00000489556 APLP1P51693 650 aa10.15□□□□□ -0.78
CNIH3-209ENST00000489556 GABPAQ06546 454 aa10.15□□□□□ -0.78
CNIH3-209ENST00000489556 SART3Q15020 963 aaKnown RBP10.15□□□□□ -0.78
CNIH3-209ENST00000489556 CST9Q5W186 159 aa10.15□□□□□ -0.78
CNIH3-209ENST00000489556 BLOC1S2Q6QNY1 142 aa10.15□□□□□ -0.78
CNIH3-209ENST00000489556 TBC1D10CQ8IV04 446 aa10.15□□□□□ -0.78
CNIH3-209ENST00000489556 SCYL3Q8IZE3 742 aa10.15□□□□□ -0.78
CNIH3-209ENST00000489556 FEZ1Q99689 392 aa10.15□□□□□ -0.78
CNIH3-209ENST00000489556 AS3MTQ9HBK9 375 aa10.15□□□□□ -0.78
CNIH3-209ENST00000489556 SNX14Q9Y5W7 946 aa10.15□□□□□ -0.78
CNIH3-209ENST00000489556 DDX60LQ5H9U9 1706 aaKnown RBP10.15□□□□□ -0.78
CNIH3-209ENST00000489556 ROBO3Q96MS0 1386 aa10.14□□□□□ -0.79
CNIH3-209ENST00000489556 LAMA4Q16363 1823 aa10.14□□□□□ -0.79
CNIH3-209ENST00000489556 NEDD4P46934 1319 aa10.14□□□□□ -0.79
CNIH3-209ENST00000489556 PASKQ96RG2 1323 aa10.14□□□□□ -0.79
CNIH3-209ENST00000489556 PHF20L1A8MW92 1017 aa10.14□□□□□ -0.79
CNIH3-209ENST00000489556 ORC4O43929 436 aa10.14□□□□□ -0.79
CNIH3-209ENST00000489556 HMGB1P09429 215 aaKnown RBP10.14□□□□□ -0.79
CNIH3-209ENST00000489556 RASA1P20936 1047 aa10.14□□□□□ -0.79
CNIH3-209ENST00000489556 MCM5P33992 734 aa10.14□□□□□ -0.79
CNIH3-209ENST00000489556 ZNF157P51786 506 aaPredicted RBP10.14□□□□□ -0.79
CNIH3-209ENST00000489556 MAP3K10Q02779 954 aa10.14□□□□□ -0.79
CNIH3-209ENST00000489556 VGLL4Q14135 290 aa10.14□□□□□ -0.79
CNIH3-209ENST00000489556 CCDC178Q5BJE1 867 aa10.14□□□□□ -0.79
CNIH3-209ENST00000489556 PPP4R3BQ5MIZ7 849 aa10.14□□□□□ -0.79
CNIH3-209ENST00000489556 TATDN1Q6P1N9 297 aa10.14□□□□□ -0.79
CNIH3-209ENST00000489556 TMEM179Q6ZVK1 233 aa10.14□□□□□ -0.79
CNIH3-209ENST00000489556 CHST3Q7LGC8 479 aa10.14□□□□□ -0.79
CNIH3-209ENST00000489556 METTL16Q86W50 562 aaKnown RBP10.14□□□□□ -0.79
CNIH3-209ENST00000489556 RASEFQ8IZ41 740 aa10.14□□□□□ -0.79
CNIH3-209ENST00000489556 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.14□□□□□ -0.79
CNIH3-209ENST00000489556 ZKSCAN3Q9BRR0 538 aa10.14□□□□□ -0.79
CNIH3-209ENST00000489556 DNAJC18Q9H819 358 aa10.14□□□□□ -0.79
CNIH3-209ENST00000489556 ARHGEF10LQ9HCE6 1279 aa10.14□□□□□ -0.79
CNIH3-209ENST00000489556 GINM1Q9NU53 330 aa10.14□□□□□ -0.79
CNIH3-209ENST00000489556 ZBTB21Q9ULJ3 1066 aa10.14□□□□□ -0.79
CNIH3-209ENST00000489556 ISY1Q9ULR0 285 aaKnown RBP10.14□□□□□ -0.79
CNIH3-209ENST00000489556 NAP1L2Q9ULW6 460 aaPredicted RBP10.14□□□□□ -0.79
CNIH3-209ENST00000489556 STX8Q9UNK0 236 aa10.14□□□□□ -0.79
CNIH3-209ENST00000489556 CYP46A1Q9Y6A2 500 aa10.14□□□□□ -0.79
CNIH3-209ENST00000489556 ZHX2Q9Y6X8 837 aa10.14□□□□□ -0.79
CNIH3-209ENST00000489556 PAPPA2Q9BXP8 1791 aa10.14□□□□□ -0.79
CNIH3-209ENST00000489556 USP17L5A8MUK1 530 aa10.13□□□□□ -0.79
CNIH3-209ENST00000489556 IFIT3O14879 490 aaKnown RBP10.13□□□□□ -0.79
CNIH3-209ENST00000489556 CASTP20810 708 aaKnown RBP10.13□□□□□ -0.79
CNIH3-209ENST00000489556 MKRN3Q13064 507 aaKnown RBP10.13□□□□□ -0.79
CNIH3-209ENST00000489556 SEPT2Q15019 361 aa10.13□□□□□ -0.79
CNIH3-209ENST00000489556 NFXL1Q6ZNB6 911 aa10.13□□□□□ -0.79
CNIH3-209ENST00000489556 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.13□□□□□ -0.79
CNIH3-209ENST00000489556 ERO1BQ86YB8 467 aa10.13□□□□□ -0.79
CNIH3-209ENST00000489556 OTUD5Q96G74 571 aa10.13□□□□□ -0.79
CNIH3-209ENST00000489556 CLMNQ96JQ2 1002 aa10.13□□□□□ -0.79
CNIH3-209ENST00000489556 NBPF3Q9H094 633 aa10.13□□□□□ -0.79
CNIH3-209ENST00000489556 KANSL2Q9H9L4 492 aa10.13□□□□□ -0.79
CNIH3-209ENST00000489556 ZSWIM5Q9P217 1185 aa10.13□□□□□ -0.79
CNIH3-209ENST00000489556 CLIP2Q9UDT6 1046 aa10.13□□□□□ -0.79
CNIH3-209ENST00000489556 ZNF112Q9UJU3 913 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms