RNA–Protein interactions for RNA: ENST00000489519.1

CACFD1-205, Transcript of calcium channel flower domain containing 1, humanhuman

TSL 2

Gene CACFD1, Length 795 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-205ENST00000489519 DNAJC18Q9H819 358 aa24.46■■□□□ 1.51
CACFD1-205ENST00000489519 SAP30BPQ9UHR5 308 aaKnown RBP24.46■■□□□ 1.51
CACFD1-205ENST00000489519 USP5P45974 858 aa24.45■■□□□ 1.5
CACFD1-205ENST00000489519 TTF1Q15361 905 aaPredicted RBP24.45■■□□□ 1.5
CACFD1-205ENST00000489519 KIF1BPQ96EK5 621 aa24.45■■□□□ 1.5
CACFD1-205ENST00000489519 ANTXR1Q9H6X2 564 aa24.45■■□□□ 1.5
CACFD1-205ENST00000489519 IL1RAPL2Q9NP60 686 aa24.45■■□□□ 1.5
CACFD1-205ENST00000489519 ZBTB40Q9NUA8 1239 aa24.45■■□□□ 1.5
CACFD1-205ENST00000489519 TMOD4Q9NZQ9 345 aa24.45■■□□□ 1.5
CACFD1-205ENST00000489519 NDUFB9Q9Y6M9 179 aa24.45■■□□□ 1.5
CACFD1-205ENST00000489519 GJA8P48165 433 aa24.44■■□□□ 1.5
CACFD1-205ENST00000489519 MTMR2Q13614 643 aa24.44■■□□□ 1.5
CACFD1-205ENST00000489519 USP17L10C9JJH3 530 aa24.43■■□□□ 1.5
CACFD1-205ENST00000489519 HOXA7P31268 230 aaPredicted RBP24.43■■□□□ 1.5
CACFD1-205ENST00000489519 JAG1P78504 1218 aa24.43■■□□□ 1.5
CACFD1-205ENST00000489519 ZBTB21Q9ULJ3 1066 aa24.43■■□□□ 1.5
CACFD1-205ENST00000489519 COG6Q9Y2V7 657 aa24.43■■□□□ 1.5
CACFD1-205ENST00000489519 DOCK3Q8IZD9 2030 aa24.43■■□□□ 1.5
CACFD1-205ENST00000489519 MYH1P12882 1939 aa24.42■■□□□ 1.5
CACFD1-205ENST00000489519 GDF11O95390 407 aa24.42■■□□□ 1.5
CACFD1-205ENST00000489519 CAPN2P17655 700 aa24.42■■□□□ 1.5
CACFD1-205ENST00000489519 IRX3P78415 501 aaPredicted RBP24.42■■□□□ 1.5
CACFD1-205ENST00000489519 TTC6Q86TZ1 520 aa24.42■■□□□ 1.5
CACFD1-205ENST00000489519 SHISA4Q96DD7 197 aa24.42■■□□□ 1.5
CACFD1-205ENST00000489519 SERPINB13Q9UIV8 391 aa24.42■■□□□ 1.5
CACFD1-205ENST00000489519 RAB11FIP3O75154 756 aa24.41■■□□□ 1.5
CACFD1-205ENST00000489519 IFIT2P09913 472 aaKnown RBP24.41■■□□□ 1.5
CACFD1-205ENST00000489519 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.41■■□□□ 1.5
CACFD1-205ENST00000489519 EHD4Q9H223 541 aa24.41■■□□□ 1.5
CACFD1-205ENST00000489519 RCAN3Q9UKA8 241 aa24.41■■□□□ 1.5
CACFD1-205ENST00000489519 ELNP15502 786 aa24.4■■□□□ 1.5
CACFD1-205ENST00000489519 TATDN1Q6P1N9 297 aa24.4■■□□□ 1.5
CACFD1-205ENST00000489519 SIRT2Q8IXJ6 389 aa24.4■■□□□ 1.5
CACFD1-205ENST00000489519 UNC93B1Q9H1C4 597 aa24.4■■□□□ 1.5
CACFD1-205ENST00000489519 MORF4L1Q9UBU8 362 aa24.4■■□□□ 1.5
CACFD1-205ENST00000489519 APBB1O00213 710 aa24.39■■□□□ 1.49
CACFD1-205ENST00000489519 INHAP05111 366 aa24.39■■□□□ 1.49
CACFD1-205ENST00000489519 SLC9C2Q5TAH2 1124 aa24.39■■□□□ 1.49
CACFD1-205ENST00000489519 U2AF1L4Q8WU68 220 aaKnown RBP24.39■■□□□ 1.49
CACFD1-205ENST00000489519 TAOK2Q9UL54 1235 aa24.39■■□□□ 1.49
CACFD1-205ENST00000489519 MAGEB6P1A0A0J9YX57 407 aa24.38■■□□□ 1.49
CACFD1-205ENST00000489519 SGPL1O95470 568 aa24.38■■□□□ 1.49
CACFD1-205ENST00000489519 GH2P01242 217 aa24.38■■□□□ 1.49
CACFD1-205ENST00000489519 SHROOM1Q2M3G4 852 aaPredicted RBP24.38■■□□□ 1.49
CACFD1-205ENST00000489519 USP17L2Q6R6M4 530 aa24.38■■□□□ 1.49
CACFD1-205ENST00000489519 P2RX7Q99572 595 aaKnown RBP24.38■■□□□ 1.49
CACFD1-205ENST00000489519 RIOK1Q9BRS2 568 aaKnown RBP24.38■■□□□ 1.49
CACFD1-205ENST00000489519 PDE6AP16499 860 aa24.37■■□□□ 1.49
CACFD1-205ENST00000489519 HERVK_113P62684 666 aa24.37■■□□□ 1.49
CACFD1-205ENST00000489519 HABP4Q5JVS0 413 aaKnown RBP24.37■■□□□ 1.49
CACFD1-205ENST00000489519 PCDH10Q9P2E7 1040 aa24.37■■□□□ 1.49
CACFD1-205ENST00000489519 CERKLQ49MI3 558 aaPredicted RBP24.36■■□□□ 1.49
CACFD1-205ENST00000489519 UBE2Q1Q7Z7E8 422 aa24.36■■□□□ 1.49
CACFD1-205ENST00000489519 GPRC5AQ8NFJ5 357 aa24.36■■□□□ 1.49
CACFD1-205ENST00000489519 GTF3C2Q8WUA4 911 aaPredicted RBP24.36■■□□□ 1.49
CACFD1-205ENST00000489519 HTATIP2Q9BUP3 242 aa24.36■■□□□ 1.49
CACFD1-205ENST00000489519 CRNKL1Q9BZJ0 848 aaKnown RBP24.36■■□□□ 1.49
CACFD1-205ENST00000489519 GJD2Q9UKL4 321 aa24.36■■□□□ 1.49
CACFD1-205ENST00000489519 CEP290O15078 2479 aa24.35■■□□□ 1.49
CACFD1-205ENST00000489519 GOLIM4O00461 696 aa24.35■■□□□ 1.49
CACFD1-205ENST00000489519 DPF3Q92784 378 aa24.35■■□□□ 1.49
CACFD1-205ENST00000489519 DNAJC2Q99543 621 aaKnown RBP24.35■■□□□ 1.49
CACFD1-205ENST00000489519 EMILIN3Q9NT22 766 aa24.35■■□□□ 1.49
CACFD1-205ENST00000489519 POLR3DP05423 398 aaPredicted RBP24.34■■□□□ 1.49
CACFD1-205ENST00000489519 PDE3AQ14432 1141 aa24.34■■□□□ 1.49
CACFD1-205ENST00000489519 ABCB5Q2M3G0 1257 aa24.34■■□□□ 1.49
CACFD1-205ENST00000489519 FEZ1Q99689 392 aa24.34■■□□□ 1.49
CACFD1-205ENST00000489519 CABP5Q9NP86 173 aa24.34■■□□□ 1.49
CACFD1-205ENST00000489519 PAK6Q9NQU5 681 aaPredicted RBP24.34■■□□□ 1.49
CACFD1-205ENST00000489519 ZNF532Q9HCE3 1301 aa24.34■■□□□ 1.49
CACFD1-205ENST00000489519 H0YGN5 161 aa24.33■■□□□ 1.49
CACFD1-205ENST00000489519 FARP2O94887 1054 aaPredicted RBP24.33■■□□□ 1.49
CACFD1-205ENST00000489519 TFRCP02786 760 aaKnown RBP24.33■■□□□ 1.49
CACFD1-205ENST00000489519 PLCD1P51178 756 aa24.33■■□□□ 1.49
CACFD1-205ENST00000489519 USP14P54578 494 aa24.33■■□□□ 1.49
CACFD1-205ENST00000489519 RAB3GAP1Q15042 981 aa24.33■■□□□ 1.49
CACFD1-205ENST00000489519 C12orf42Q96LP6 360 aa24.33■■□□□ 1.49
CACFD1-205ENST00000489519 DEFB118Q96PH6 123 aa24.33■■□□□ 1.49
CACFD1-205ENST00000489519 BCL11AQ9H165 835 aa24.33■■□□□ 1.49
CACFD1-205ENST00000489519 RBPJLQ9UBG7 517 aa24.33■■□□□ 1.49
CACFD1-205ENST00000489519 HMGCRP04035 888 aa24.32■■□□□ 1.48
CACFD1-205ENST00000489519 ATP5JP18859 108 aa24.32■■□□□ 1.48
CACFD1-205ENST00000489519 KIAA1683Q9H0B3 1180 aa24.32■■□□□ 1.48
CACFD1-205ENST00000489519 TCRBV5S4A2TA0A5A2 114 aa24.31■■□□□ 1.48
CACFD1-205ENST00000489519 MAPK4P31152 587 aa24.31■■□□□ 1.48
CACFD1-205ENST00000489519 SHMT1P34896 483 aa24.31■■□□□ 1.48
CACFD1-205ENST00000489519 CCAR1Q8IX12 1150 aaKnown RBP24.31■■□□□ 1.48
CACFD1-205ENST00000489519 TXNRD2Q9NNW7 524 aa24.31■■□□□ 1.48
CACFD1-205ENST00000489519 PAG1Q9NWQ8 432 aa24.31■■□□□ 1.48
CACFD1-205ENST00000489519 MCM9Q9NXL9 1143 aa24.31■■□□□ 1.48
CACFD1-205ENST00000489519 USP17L15C9J2P7 530 aa24.3■■□□□ 1.48
CACFD1-205ENST00000489519 USP17L13C9JLJ4 530 aa24.3■■□□□ 1.48
CACFD1-205ENST00000489519 USP17L11C9JVI0 530 aa24.3■■□□□ 1.48
CACFD1-205ENST00000489519 USP17L18D6R9N7 530 aa24.3■■□□□ 1.48
CACFD1-205ENST00000489519 USP17L22D6RA61 530 aa24.3■■□□□ 1.48
CACFD1-205ENST00000489519 USP17L17D6RBQ6 530 aa24.3■■□□□ 1.48
CACFD1-205ENST00000489519 USP17L19D6RCP7 530 aa24.3■■□□□ 1.48
CACFD1-205ENST00000489519 USP17L20D6RJB6 530 aa24.3■■□□□ 1.48
CACFD1-205ENST00000489519 ERVK-9P63128 1117 aa24.3■■□□□ 1.48
CACFD1-205ENST00000489519 ERVK-24P63145 666 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms