RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 USP17L5A8MUK1 530 aa14.42□□□□□ -0.1
ACTN4-206ENST00000489451 COL9A1P20849 921 aa14.42□□□□□ -0.1
ACTN4-206ENST00000489451 HNRNPUQ00839 825 aaKnown RBP eCLIP14.42□□□□□ -0.1
ACTN4-206ENST00000489451 CCDC158Q5M9N0 1113 aa14.42□□□□□ -0.1
ACTN4-206ENST00000489451 GPR153Q6NV75 609 aa14.42□□□□□ -0.1
ACTN4-206ENST00000489451 CEP85Q6P2H3 762 aa14.42□□□□□ -0.1
ACTN4-206ENST00000489451 PXYLP1Q8TE99 480 aa14.42□□□□□ -0.1
ACTN4-206ENST00000489451 WDR18Q9BV38 432 aa14.42□□□□□ -0.1
ACTN4-206ENST00000489451 PAK6Q9NQU5 681 aaPredicted RBP14.42□□□□□ -0.1
ACTN4-206ENST00000489451 PALD1Q9ULE6 856 aa14.42□□□□□ -0.1
ACTN4-206ENST00000489451 GDF11O95390 407 aa14.41□□□□□ -0.1
ACTN4-206ENST00000489451 UBXN2AP68543 259 aa14.41□□□□□ -0.1
ACTN4-206ENST00000489451 MTMR2Q13614 643 aa14.41□□□□□ -0.1
ACTN4-206ENST00000489451 ITPRIPQ8IWB1 547 aa14.41□□□□□ -0.1
ACTN4-206ENST00000489451 TBC1D2Q9BYX2 928 aa14.41□□□□□ -0.1
ACTN4-206ENST00000489451 DHX36Q9H2U1 1008 aaKnown RBP14.41□□□□□ -0.1
ACTN4-206ENST00000489451 ANTXR1Q9H6X2 564 aa14.41□□□□□ -0.1
ACTN4-206ENST00000489451 BIN2Q9UBW5 565 aaPredicted RBP14.41□□□□□ -0.1
ACTN4-206ENST00000489451 GJD2Q9UKL4 321 aa14.41□□□□□ -0.1
ACTN4-206ENST00000489451 SGPL1O95470 568 aa14.4□□□□□ -0.1
ACTN4-206ENST00000489451 BAG3O95817 575 aa14.4□□□□□ -0.1
ACTN4-206ENST00000489451 TRIM32Q13049 653 aa14.4□□□□□ -0.1
ACTN4-206ENST00000489451 OS9Q13438 667 aaPredicted RBP14.4□□□□□ -0.1
ACTN4-206ENST00000489451 NKX2-3Q8TAU0 364 aa14.4□□□□□ -0.1
ACTN4-206ENST00000489451 TXNRD2Q9NNW7 524 aa14.4□□□□□ -0.1
ACTN4-206ENST00000489451 SAP30BPQ9UHR5 308 aaKnown RBP14.4□□□□□ -0.1
ACTN4-206ENST00000489451 PNMA3Q9UL41 463 aa14.4□□□□□ -0.1
ACTN4-206ENST00000489451 FARP2O94887 1054 aaPredicted RBP14.39□□□□□ -0.11
ACTN4-206ENST00000489451 PLCG2P16885 1265 aa14.39□□□□□ -0.11
ACTN4-206ENST00000489451 GCLCP48506 637 aaPredicted RBP14.39□□□□□ -0.11
ACTN4-206ENST00000489451 BACE1P56817 501 aa14.39□□□□□ -0.11
ACTN4-206ENST00000489451 FTSJ3Q8IY81 847 aaKnown RBP14.39□□□□□ -0.11
ACTN4-206ENST00000489451 MIGA1Q8NAN2 632 aa14.39□□□□□ -0.11
ACTN4-206ENST00000489451 PANK1Q8TE04 598 aa14.39□□□□□ -0.11
ACTN4-206ENST00000489451 DEFB118Q96PH6 123 aa14.39□□□□□ -0.11
ACTN4-206ENST00000489451 CRISPLD2Q9H0B8 497 aa14.39□□□□□ -0.11
ACTN4-206ENST00000489451 MORF4L1Q9UBU8 362 aa14.39□□□□□ -0.11
ACTN4-206ENST00000489451 ZBTB21Q9ULJ3 1066 aa14.39□□□□□ -0.11
ACTN4-206ENST00000489451 EXOC6BQ9Y2D4 811 aa14.39□□□□□ -0.11
ACTN4-206ENST00000489451 LAMA3Q16787 3333 aa14.39□□□□□ -0.11
ACTN4-206ENST00000489451 NAV1Q8NEY1 1877 aa14.38□□□□□ -0.11
ACTN4-206ENST00000489451 ASNSP08243 561 aa14.38□□□□□ -0.11
ACTN4-206ENST00000489451 CYP7A1P22680 504 aa14.38□□□□□ -0.11
ACTN4-206ENST00000489451 HOXA7P31268 230 aaPredicted RBP14.38□□□□□ -0.11
ACTN4-206ENST00000489451 EVX2Q03828 476 aa14.38□□□□□ -0.11
ACTN4-206ENST00000489451 FOXP4Q8IVH2 680 aaPredicted RBP14.38□□□□□ -0.11
ACTN4-206ENST00000489451 COA7Q96BR5 231 aa14.38□□□□□ -0.11
ACTN4-206ENST00000489451 P2RX7Q99572 595 aaKnown RBP14.38□□□□□ -0.11
ACTN4-206ENST00000489451 NOL10Q9BSC4 688 aaKnown RBP14.38□□□□□ -0.11
ACTN4-206ENST00000489451 AS3MTQ9HBK9 375 aa14.38□□□□□ -0.11
ACTN4-206ENST00000489451 EMILIN3Q9NT22 766 aa14.38□□□□□ -0.11
ACTN4-206ENST00000489451 MTMR10Q9NXD2 777 aa14.38□□□□□ -0.11
ACTN4-206ENST00000489451 IDH1O75874 414 aaKnown RBP14.37□□□□□ -0.11
ACTN4-206ENST00000489451 MAGEB6Q8N7X4 407 aa14.37□□□□□ -0.11
ACTN4-206ENST00000489451 DIS3LQ8TF46 1054 aaKnown RBP14.37□□□□□ -0.11
ACTN4-206ENST00000489451 TRIB2Q92519 343 aa14.37□□□□□ -0.11
ACTN4-206ENST00000489451 STAP2Q9UGK3 403 aa14.37□□□□□ -0.11
ACTN4-206ENST00000489451 TAOK2Q9UL54 1235 aa14.37□□□□□ -0.11
ACTN4-206ENST00000489451 IGSF3O75054 1194 aa14.36□□□□□ -0.11
ACTN4-206ENST00000489451 HERVK_113P62684 666 aa14.36□□□□□ -0.11
ACTN4-206ENST00000489451 PABPC4Q13310 644 aaKnown RBP eCLIP14.36□□□□□ -0.11
ACTN4-206ENST00000489451 Q3C1V9 767 aa14.36□□□□□ -0.11
ACTN4-206ENST00000489451 TATDN1Q6P1N9 297 aa14.36□□□□□ -0.11
ACTN4-206ENST00000489451 RIOK1Q9BRS2 568 aaKnown RBP14.36□□□□□ -0.11
ACTN4-206ENST00000489451 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.36□□□□□ -0.111e-7■■■■■ 28.5
ACTN4-206ENST00000489451 RBPJLQ9UBG7 517 aa14.36□□□□□ -0.11
ACTN4-206ENST00000489451 USP17L10C9JJH3 530 aa14.35□□□□□ -0.11
ACTN4-206ENST00000489451 EVI5O60447 810 aa14.35□□□□□ -0.11
ACTN4-206ENST00000489451 GH2P01242 217 aa14.35□□□□□ -0.11
ACTN4-206ENST00000489451 HMGCRP04035 888 aa14.35□□□□□ -0.11
ACTN4-206ENST00000489451 MAP3K21Q5TCX8 1036 aa14.35□□□□□ -0.11
ACTN4-206ENST00000489451 AACSQ86V21 672 aa14.35□□□□□ -0.11
ACTN4-206ENST00000489451 SIRT2Q8IXJ6 389 aa14.35□□□□□ -0.11
ACTN4-206ENST00000489451 CRACR2BQ8N4Y2 399 aaPredicted RBP14.35□□□□□ -0.11
ACTN4-206ENST00000489451 PORCNQ9H237 461 aa14.35□□□□□ -0.11
ACTN4-206ENST00000489451 IL1RAPL2Q9NP60 686 aa14.35□□□□□ -0.11
ACTN4-206ENST00000489451 FRMPD3Q5JV73 1810 aa14.35□□□□□ -0.11
ACTN4-206ENST00000489451 ZBED9Q6R2W3 1325 aa14.35□□□□□ -0.11
ACTN4-206ENST00000489451 C19orf81C9J6K1 198 aa14.34□□□□□ -0.11
ACTN4-206ENST00000489451 CNMDO75829 334 aa14.34□□□□□ -0.11
ACTN4-206ENST00000489451 GUCY1A2P33402 732 aa14.34□□□□□ -0.11
ACTN4-206ENST00000489451 SHMT1P34896 483 aa14.34□□□□□ -0.11
ACTN4-206ENST00000489451 PLA2G5P39877 138 aa14.34□□□□□ -0.11
ACTN4-206ENST00000489451 PLCD1P51178 756 aa14.34□□□□□ -0.11
ACTN4-206ENST00000489451 IRX3P78415 501 aaPredicted RBP14.34□□□□□ -0.11
ACTN4-206ENST00000489451 USP6NLQ92738 828 aa14.34□□□□□ -0.11
ACTN4-206ENST00000489451 PAWRQ96IZ0 340 aaKnown RBP14.34□□□□□ -0.11
ACTN4-206ENST00000489451 C12orf42Q96LP6 360 aa14.34□□□□□ -0.11
ACTN4-206ENST00000489451 EHD4Q9H223 541 aa14.34□□□□□ -0.11
ACTN4-206ENST00000489451 GINM1Q9NU53 330 aa14.34□□□□□ -0.11
ACTN4-206ENST00000489451 TMOD4Q9NZQ9 345 aa14.34□□□□□ -0.11
ACTN4-206ENST00000489451 RLFQ13129 1914 aa14.34□□□□□ -0.11
ACTN4-206ENST00000489451 TFRCP02786 760 aaKnown RBP14.33□□□□□ -0.12
ACTN4-206ENST00000489451 HLA-DOAP06340 250 aa14.33□□□□□ -0.12
ACTN4-206ENST00000489451 CYP2B6P20813 491 aa14.33□□□□□ -0.12
ACTN4-206ENST00000489451 RHPN1Q8TCX5 695 aa14.33□□□□□ -0.12
ACTN4-206ENST00000489451 ACER1Q8TDN7 264 aa14.33□□□□□ -0.12
ACTN4-206ENST00000489451 FAM122AQ96E09 287 aa14.33□□□□□ -0.12
ACTN4-206ENST00000489451 RPTORQ8N122 1335 aa14.33□□□□□ -0.12
ACTN4-206ENST00000489451 DNAH12Q6ZR08 3092 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms