RNA–Protein interactions for RNA: ENST00000489419.1

CSMD2-209, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2

Gene CSMD2, Length 2,431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-209ENST00000489419 SPTLC3Q9NUV7 552 aa10.19□□□□□ -0.78
CSMD2-209ENST00000489419 RBM28Q9NW13 759 aaKnown RBP10.19□□□□□ -0.78
CSMD2-209ENST00000489419 IRS2Q9Y4H2 1338 aa10.19□□□□□ -0.78
CSMD2-209ENST00000489419 XBP1P17861 261 aa10.19□□□□□ -0.78
CSMD2-209ENST00000489419 SETQ01105 290 aaPredicted RBP10.19□□□□□ -0.78
CSMD2-209ENST00000489419 MECOMQ03112 1051 aa10.19□□□□□ -0.78
CSMD2-209ENST00000489419 RILPL1Q5EBL4 403 aa10.19□□□□□ -0.78
CSMD2-209ENST00000489419 CTR9Q6PD62 1173 aa10.19□□□□□ -0.78
CSMD2-209ENST00000489419 CCDC144CPQ8IYA2 1237 aa10.19□□□□□ -0.78
CSMD2-209ENST00000489419 ZNF384Q8TF68 577 aa10.19□□□□□ -0.78
CSMD2-209ENST00000489419 MRFAP1L1Q96HT8 127 aa10.19□□□□□ -0.78
CSMD2-209ENST00000489419 NOL10Q9BSC4 688 aaKnown RBP10.19□□□□□ -0.78
CSMD2-209ENST00000489419 MYL10Q9BUA6 226 aa10.19□□□□□ -0.78
CSMD2-209ENST00000489419 TRIM5Q9C035 493 aa10.19□□□□□ -0.78
CSMD2-209ENST00000489419 HPSEQ9Y251 543 aa10.19□□□□□ -0.78
CSMD2-209ENST00000489419 TAF1LQ8IZX4 1826 aa10.19□□□□□ -0.78
CSMD2-209ENST00000489419 TNKSO95271 1327 aa10.18□□□□□ -0.78
CSMD2-209ENST00000489419 WTIPA6NIX2 430 aaPredicted RBP10.18□□□□□ -0.78
CSMD2-209ENST00000489419 BECN2A8MW95 431 aa10.18□□□□□ -0.78
CSMD2-209ENST00000489419 GRAPQ13588 217 aa10.18□□□□□ -0.78
CSMD2-209ENST00000489419 ZRSR1Q15695 479 aaKnown RBP10.18□□□□□ -0.78
CSMD2-209ENST00000489419 CATIPQ7Z7H3 387 aa10.18□□□□□ -0.78
CSMD2-209ENST00000489419 CEP120Q8N960 986 aa10.18□□□□□ -0.78
CSMD2-209ENST00000489419 WDR66Q8TBY9 1149 aa10.18□□□□□ -0.78
CSMD2-209ENST00000489419 GRAPLQ8TC17 118 aaPredicted RBP10.18□□□□□ -0.78
CSMD2-209ENST00000489419 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.18□□□□□ -0.78
CSMD2-209ENST00000489419 WDHD1O75717 1129 aaPredicted RBP10.18□□□□□ -0.78
CSMD2-209ENST00000489419 DDAH1O94760 285 aa10.18□□□□□ -0.78
CSMD2-209ENST00000489419 PFKFB1P16118 471 aa10.18□□□□□ -0.78
CSMD2-209ENST00000489419 DYNLL1P63167 89 aaKnown RBP10.18□□□□□ -0.78
CSMD2-209ENST00000489419 IRX5P78411 483 aaPredicted RBP10.18□□□□□ -0.78
CSMD2-209ENST00000489419 NOLC1Q14978 699 aaKnown RBP eCLIP10.18□□□□□ -0.78
CSMD2-209ENST00000489419 RESP18Q5W5W9 173 aa10.18□□□□□ -0.78
CSMD2-209ENST00000489419 ZKSCAN3Q9BRR0 538 aa10.18□□□□□ -0.78
CSMD2-209ENST00000489419 TTC12Q9H892 705 aaPredicted RBP10.18□□□□□ -0.78
CSMD2-209ENST00000489419 ARPP21Q9UBL0 812 aaPredicted RBP10.18□□□□□ -0.78
CSMD2-209ENST00000489419 TAF1P21675 1872 aa10.18□□□□□ -0.78
CSMD2-209ENST00000489419 PRPF3O43395 683 aaKnown RBP10.17□□□□□ -0.78
CSMD2-209ENST00000489419 SYKP43405 635 aa10.17□□□□□ -0.78
CSMD2-209ENST00000489419 AKAP17AQ02040 695 aaKnown RBP10.17□□□□□ -0.78
CSMD2-209ENST00000489419 NBPF20Q3BBV1 942 aa10.17□□□□□ -0.78
CSMD2-209ENST00000489419 C11orf57Q6ZUT1 292 aaPredicted RBP10.17□□□□□ -0.78
CSMD2-209ENST00000489419 ENAHQ8N8S7 591 aaPredicted RBP10.17□□□□□ -0.78
CSMD2-209ENST00000489419 KIAA1524Q8TCG1 905 aa10.17□□□□□ -0.78
CSMD2-209ENST00000489419 DCP1AQ9NPI6 582 aaPredicted RBP10.17□□□□□ -0.78
CSMD2-209ENST00000489419 CEP131Q9UPN4 1083 aa10.17□□□□□ -0.78
CSMD2-209ENST00000489419 DUOX1Q9NRD9 1551 aa10.17□□□□□ -0.78
CSMD2-209ENST00000489419 USP17L12C9JPN9 530 aa10.17□□□□□ -0.78
CSMD2-209ENST00000489419 USP17L21D6R901 530 aa10.17□□□□□ -0.78
CSMD2-209ENST00000489419 NEMFO60524 1076 aa10.17□□□□□ -0.78
CSMD2-209ENST00000489419 NLRP12P59046 1061 aa10.17□□□□□ -0.78
CSMD2-209ENST00000489419 GSTO1P78417 241 aa10.17□□□□□ -0.78
CSMD2-209ENST00000489419 IFIT1BQ5T764 474 aaKnown RBP10.17□□□□□ -0.78
CSMD2-209ENST00000489419 DIS3L2Q8IYB7 885 aaKnown RBP10.17□□□□□ -0.78
CSMD2-209ENST00000489419 KRI1Q8N9T8 703 aaKnown RBP10.17□□□□□ -0.78
CSMD2-209ENST00000489419 ZNF579Q8NAF0 562 aaKnown RBP10.17□□□□□ -0.78
CSMD2-209ENST00000489419 CERKQ8TCT0 537 aa10.17□□□□□ -0.78
CSMD2-209ENST00000489419 MAST2Q6P0Q8 1798 aa10.17□□□□□ -0.78
CSMD2-209ENST00000489419 XDHP47989 1333 aa10.16□□□□□ -0.78
CSMD2-209ENST00000489419 PDE4BQ07343 736 aa10.16□□□□□ -0.78
CSMD2-209ENST00000489419 FUT2Q10981 343 aa10.16□□□□□ -0.78
CSMD2-209ENST00000489419 NFIXQ14938 502 aa10.16□□□□□ -0.78
CSMD2-209ENST00000489419 CCDC178Q5BJE1 867 aa10.16□□□□□ -0.78
CSMD2-209ENST00000489419 SMIM5Q71RC9 77 aa10.16□□□□□ -0.78
CSMD2-209ENST00000489419 DHX40Q8IX18 779 aaKnown RBP10.16□□□□□ -0.78
CSMD2-209ENST00000489419 CNBD1Q8NA66 436 aa10.16□□□□□ -0.78
CSMD2-209ENST00000489419 NUP133Q8WUM0 1156 aa10.16□□□□□ -0.78
CSMD2-209ENST00000489419 TFCP2L1Q9NZI6 479 aa10.16□□□□□ -0.78
CSMD2-209ENST00000489419 TUBE1Q9UJT0 475 aa10.16□□□□□ -0.78
CSMD2-209ENST00000489419 ECM29Q5VYK3 1845 aa10.16□□□□□ -0.78
CSMD2-209ENST00000489419 KIAA1551Q9HCM1 1747 aa10.16□□□□□ -0.78
CSMD2-209ENST00000489419 SMTNL1A8MU46 457 aa10.16□□□□□ -0.78
CSMD2-209ENST00000489419 BTBD18B2RXH4 712 aa10.16□□□□□ -0.78
CSMD2-209ENST00000489419 NPHP1O15259 732 aa10.16□□□□□ -0.78
CSMD2-209ENST00000489419 LDHCP07864 332 aa10.16□□□□□ -0.78
CSMD2-209ENST00000489419 KLRK1P26718 216 aa10.16□□□□□ -0.78
CSMD2-209ENST00000489419 MARCKSP29966 332 aaPredicted RBP10.16□□□□□ -0.78
CSMD2-209ENST00000489419 GUCY1A2P33402 732 aa10.16□□□□□ -0.78
CSMD2-209ENST00000489419 PPP4CP60510 307 aa10.16□□□□□ -0.78
CSMD2-209ENST00000489419 TROAPQ12815 778 aa10.16□□□□□ -0.78
CSMD2-209ENST00000489419 DHX8Q14562 1220 aaKnown RBP10.16□□□□□ -0.78
CSMD2-209ENST00000489419 SHC4Q6S5L8 630 aa10.16□□□□□ -0.78
CSMD2-209ENST00000489419 FAM196AQ6ZSG2 479 aa10.16□□□□□ -0.78
CSMD2-209ENST00000489419 DRC7Q8IY82 874 aa10.16□□□□□ -0.78
CSMD2-209ENST00000489419 SPC24Q8NBT2 197 aa10.16□□□□□ -0.78
CSMD2-209ENST00000489419 FAM13BQ9NYF5 915 aa10.16□□□□□ -0.78
CSMD2-209ENST00000489419 HOOK1Q9UJC3 728 aaKnown RBP10.16□□□□□ -0.78
CSMD2-209ENST00000489419 TRPC5Q9UL62 973 aaPredicted RBP10.16□□□□□ -0.78
CSMD2-209ENST00000489419 SH3BP1Q9Y3L3 701 aa10.16□□□□□ -0.78
CSMD2-209ENST00000489419 SBF2Q86WG5 1849 aa10.16□□□□□ -0.78
CSMD2-209ENST00000489419 MYH13Q9UKX3 1938 aa10.15□□□□□ -0.78
CSMD2-209ENST00000489419 BMP15O95972 392 aa10.15□□□□□ -0.78
CSMD2-209ENST00000489419 PTPREP23469 700 aa10.15□□□□□ -0.78
CSMD2-209ENST00000489419 TPM4P67936 248 aa10.15□□□□□ -0.78
CSMD2-209ENST00000489419 SLC27A3Q5K4L6 730 aa10.15□□□□□ -0.78
CSMD2-209ENST00000489419 ZNF804AQ7Z570 1209 aa10.15□□□□□ -0.78
CSMD2-209ENST00000489419 DZIP1Q86YF9 867 aaKnown RBP10.15□□□□□ -0.78
CSMD2-209ENST00000489419 KCNF1Q9H3M0 494 aa10.15□□□□□ -0.78
CSMD2-209ENST00000489419 DLEC1Q9Y238 1755 aa10.15□□□□□ -0.78
CSMD2-209ENST00000489419 CCDC88AQ3V6T2 1871 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms