RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 KHSRPQ92945 711 aaKnown RBP eCLIP19■□□□□ 0.632e-12■■■□□ 15.4
UFD1-209ENST00000489406 IDI2Q9BXS1 227 aa19■□□□□ 0.63
UFD1-209ENST00000489406 NDUFB9Q9Y6M9 179 aa19■□□□□ 0.63
UFD1-209ENST00000489406 CHD9Q3L8U1 2897 aa18.99■□□□□ 0.63
UFD1-209ENST00000489406 PRDX5P30044 214 aa18.99■□□□□ 0.63
UFD1-209ENST00000489406 CYP2C19P33261 490 aa18.99■□□□□ 0.63
UFD1-209ENST00000489406 ERVK-9P63128 1117 aa18.99■□□□□ 0.63
UFD1-209ENST00000489406 ERVK-24P63145 666 aa18.99■□□□□ 0.63
UFD1-209ENST00000489406 FLIIQ13045 1269 aa18.99■□□□□ 0.63
UFD1-209ENST00000489406 SH3D19Q5HYK7 790 aa18.99■□□□□ 0.63
UFD1-209ENST00000489406 MICALL1Q8N3F8 863 aa18.99■□□□□ 0.63
UFD1-209ENST00000489406 TRPV1Q8NER1 839 aa18.99■□□□□ 0.63
UFD1-209ENST00000489406 PAGR1Q9BTK6 254 aa18.99■□□□□ 0.63
UFD1-209ENST00000489406 CLTBP09497 229 aa18.98■□□□□ 0.63
UFD1-209ENST00000489406 ATP2B2Q01814 1243 aa18.98■□□□□ 0.63
UFD1-209ENST00000489406 METTL24Q5JXM2 366 aa18.98■□□□□ 0.63
UFD1-209ENST00000489406 PLXNA1Q9UIW2 1896 aa18.97■□□□□ 0.63
UFD1-209ENST00000489406 SMIM22K7EJ46 135 aa18.97■□□□□ 0.63
UFD1-209ENST00000489406 PICALMQ13492 652 aa18.97■□□□□ 0.63
UFD1-209ENST00000489406 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.97■□□□□ 0.636e-7■■□□□ 14.1
UFD1-209ENST00000489406 MYBBP1AQ9BQG0 1328 aaKnown RBP18.97■□□□□ 0.63
UFD1-209ENST00000489406 KIAA0355O15063 1070 aa18.96■□□□□ 0.63
UFD1-209ENST00000489406 HOXA7P31268 230 aaPredicted RBP18.96■□□□□ 0.63
UFD1-209ENST00000489406 CALD1Q05682 793 aaKnown RBP18.96■□□□□ 0.63
UFD1-209ENST00000489406 LRRC24Q50LG9 513 aa18.96■□□□□ 0.63
UFD1-209ENST00000489406 C1orf53Q5VUE5 145 aa18.96■□□□□ 0.63
UFD1-209ENST00000489406 TBC1D2Q9BYX2 928 aa18.96■□□□□ 0.63
UFD1-209ENST00000489406 OSBPL5Q9H0X9 879 aaPredicted RBP18.96■□□□□ 0.63
UFD1-209ENST00000489406 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.96■□□□□ 0.63
UFD1-209ENST00000489406 DDX4Q9NQI0 724 aaKnown RBP18.96■□□□□ 0.63
UFD1-209ENST00000489406 REV3LO60673 3130 aa18.96■□□□□ 0.63
UFD1-209ENST00000489406 USP17L5A8MUK1 530 aa18.95■□□□□ 0.62
UFD1-209ENST00000489406 PDE8BO95263 885 aa18.95■□□□□ 0.62
UFD1-209ENST00000489406 LDHBP07195 334 aaKnown RBP18.95■□□□□ 0.62
UFD1-209ENST00000489406 SKIV2LQ15477 1246 aaKnown RBP18.95■□□□□ 0.62
UFD1-209ENST00000489406 TBC1D12O60347 775 aa18.94■□□□□ 0.62
UFD1-209ENST00000489406 MTMR2Q13614 643 aa18.94■□□□□ 0.62
UFD1-209ENST00000489406 WDR78Q5VTH9 848 aa18.94■□□□□ 0.62
UFD1-209ENST00000489406 AS3MTQ9HBK9 375 aa18.94■□□□□ 0.62
UFD1-209ENST00000489406 TMEM39AQ9NV64 488 aa18.94■□□□□ 0.62
UFD1-209ENST00000489406 TMOD4Q9NZQ9 345 aa18.94■□□□□ 0.62
UFD1-209ENST00000489406 RFX7Q2KHR2 1363 aa18.93■□□□□ 0.62
UFD1-209ENST00000489406 GRM8O00222 908 aa18.93■□□□□ 0.62
UFD1-209ENST00000489406 GLRX3O76003 335 aaKnown RBP18.93■□□□□ 0.62
UFD1-209ENST00000489406 CYBAP13498 195 aa18.93■□□□□ 0.62
UFD1-209ENST00000489406 NHLH1Q02575 133 aa18.93■□□□□ 0.62
UFD1-209ENST00000489406 RRP1BQ14684 758 aaKnown RBP18.93■□□□□ 0.62
UFD1-209ENST00000489406 VGLL2Q8N8G2 317 aa18.93■□□□□ 0.62
UFD1-209ENST00000489406 NPLOC4Q8TAT6 608 aa18.93■□□□□ 0.62
UFD1-209ENST00000489406 ERC2O15083 957 aa18.92■□□□□ 0.62
UFD1-209ENST00000489406 PQBP1O60828 265 aaKnown RBP18.92■□□□□ 0.62
UFD1-209ENST00000489406 PTPREP23469 700 aa18.92■□□□□ 0.62
UFD1-209ENST00000489406 CAP2P40123 477 aa18.92■□□□□ 0.62
UFD1-209ENST00000489406 BACE1P56817 501 aa18.92■□□□□ 0.62
UFD1-209ENST00000489406 BEND3Q5T5X7 828 aa18.92■□□□□ 0.62
UFD1-209ENST00000489406 ADAMTS8Q9UP79 889 aa18.92■□□□□ 0.62
UFD1-209ENST00000489406 SLC15A5A6NIM6 579 aa18.91■□□□□ 0.62
UFD1-209ENST00000489406 F6X3S4 739 aa18.91■□□□□ 0.62
UFD1-209ENST00000489406 IFIT1P09914 478 aaKnown RBP18.91■□□□□ 0.62
UFD1-209ENST00000489406 WDR43Q15061 677 aaKnown RBP eCLIP18.91■□□□□ 0.62
UFD1-209ENST00000489406 LRRC41Q15345 812 aa18.91■□□□□ 0.62
UFD1-209ENST00000489406 NCBP3Q53F19 620 aaKnown RBP18.91■□□□□ 0.62
UFD1-209ENST00000489406 NKX2-4Q9H2Z4 354 aa18.91■□□□□ 0.62
UFD1-209ENST00000489406 MSRAQ9UJ68 235 aa18.91■□□□□ 0.62
UFD1-209ENST00000489406 PI4K2BG5E9Z4 385 aa18.9■□□□□ 0.62
UFD1-209ENST00000489406 TLL1O43897 1013 aa18.9■□□□□ 0.62
UFD1-209ENST00000489406 HOXC6P09630 235 aa18.9■□□□□ 0.62
UFD1-209ENST00000489406 TWISTNBQ3B726 338 aaPredicted RBP18.9■□□□□ 0.62
UFD1-209ENST00000489406 C16orf59Q7L2K0 433 aa18.9■□□□□ 0.62
UFD1-209ENST00000489406 TSR2Q969E8 191 aaKnown RBP18.9■□□□□ 0.62
UFD1-209ENST00000489406 SLC28A3Q9HAS3 691 aa18.9■□□□□ 0.62
UFD1-209ENST00000489406 C9orf78Q9NZ63 289 aaPredicted RBP18.9■□□□□ 0.62
UFD1-209ENST00000489406 ATAD5Q96QE3 1844 aa18.89■□□□□ 0.61
UFD1-209ENST00000489406 RAB30Q15771 203 aa18.89■□□□□ 0.61
UFD1-209ENST00000489406 TMEM240Q5SV17 173 aa18.89■□□□□ 0.61
UFD1-209ENST00000489406 SLC44A5Q8NCS7 719 aa18.89■□□□□ 0.61
UFD1-209ENST00000489406 CCER1Q8TC90 406 aaPredicted RBP18.89■□□□□ 0.61
UFD1-209ENST00000489406 WDR18Q9BV38 432 aa18.89■□□□□ 0.61
UFD1-209ENST00000489406 MYH13Q9UKX3 1938 aa18.89■□□□□ 0.61
UFD1-209ENST00000489406 KIF16BQ96L93 1317 aa18.89■□□□□ 0.61
UFD1-209ENST00000489406 CHD7Q9P2D1 2997 aa18.89■□□□□ 0.61
UFD1-209ENST00000489406 PRR33A8MZF0 331 aa18.88■□□□□ 0.61
UFD1-209ENST00000489406 SEPT4O43236 478 aa18.88■□□□□ 0.61
UFD1-209ENST00000489406 FGFR2P21802 821 aa18.88■□□□□ 0.61
UFD1-209ENST00000489406 PUM3Q15397 648 aaKnown RBP18.88■□□□□ 0.61
UFD1-209ENST00000489406 RASIP1Q5U651 963 aa18.88■□□□□ 0.61
UFD1-209ENST00000489406 GTF3C2Q8WUA4 911 aaPredicted RBP18.88■□□□□ 0.61
UFD1-209ENST00000489406 HERVK_113Q902F9 699 aa18.88■□□□□ 0.61
UFD1-209ENST00000489406 SUCLG2Q96I99 432 aa18.88■□□□□ 0.61
UFD1-209ENST00000489406 UIMC1Q96RL1 719 aa18.88■□□□□ 0.61
UFD1-209ENST00000489406 GAKO14976 1311 aa18.88■□□□□ 0.61
UFD1-209ENST00000489406 CNMDO75829 334 aa18.87■□□□□ 0.61
UFD1-209ENST00000489406 CCNA1P78396 465 aa18.87■□□□□ 0.61
UFD1-209ENST00000489406 FAAP100Q0VG06 881 aa18.87■□□□□ 0.61
UFD1-209ENST00000489406 FAM47AQ5JRC9 791 aa18.87■□□□□ 0.61
UFD1-209ENST00000489406 KAZALD1Q96I82 304 aa18.87■□□□□ 0.61
UFD1-209ENST00000489406 PHF24Q9UPV7 400 aa18.87■□□□□ 0.61
UFD1-209ENST00000489406 IVNS1ABPQ9Y6Y0 642 aa18.87■□□□□ 0.61
UFD1-209ENST00000489406 APAF1O14727 1248 aa18.86■□□□□ 0.61
UFD1-209ENST00000489406 TIMP1P01033 207 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms