RNA–Protein interactions for RNA: ENST00000489304.5

CD40-206, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 1,733 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-206ENST00000489304 SKOR2Q2VWA4 1001 aaPredicted RBP21.09■□□□□ 0.97
CD40-206ENST00000489304 CDC37L1Q7L3B6 337 aa21.09■□□□□ 0.97
CD40-206ENST00000489304 MICU3Q86XE3 530 aa21.09■□□□□ 0.97
CD40-206ENST00000489304 FAM217BQ9NTX9 383 aaPredicted RBP21.09■□□□□ 0.97
CD40-206ENST00000489304 LMBRD1Q9NUN5 540 aa21.09■□□□□ 0.97
CD40-206ENST00000489304 FAM198AQ9UFP1 575 aa21.09■□□□□ 0.97
CD40-206ENST00000489304 ZNF541Q9H0D2 1346 aa21.09■□□□□ 0.97
CD40-206ENST00000489304 SLURP2P0DP57 97 aa21.09■□□□□ 0.97
CD40-206ENST00000489304 CDC27P30260 824 aa21.09■□□□□ 0.97
CD40-206ENST00000489304 ADD1P35611 737 aaKnown RBP21.09■□□□□ 0.97
CD40-206ENST00000489304 CHAMP1Q96JM3 812 aa21.09■□□□□ 0.97
CD40-206ENST00000489304 HDAC9Q9UKV0 1011 aa21.09■□□□□ 0.97
CD40-206ENST00000489304 CDKL5O76039 1030 aa21.08■□□□□ 0.97
CD40-206ENST00000489304 TCP10Q12799 353 aa21.08■□□□□ 0.97
CD40-206ENST00000489304 TNIP1Q15025 636 aa21.08■□□□□ 0.97
CD40-206ENST00000489304 CPLX2Q6PUV4 134 aaKnown RBP21.08■□□□□ 0.97
CD40-206ENST00000489304 C16orf86Q6ZW13 317 aa21.08■□□□□ 0.97
CD40-206ENST00000489304 ZNF654Q8IZM8 581 aa21.08■□□□□ 0.97
CD40-206ENST00000489304 ZNF287Q9HBT7 754 aa21.08■□□□□ 0.97
CD40-206ENST00000489304 GJA3Q9Y6H8 435 aa21.08■□□□□ 0.97
CD40-206ENST00000489304 MYH15Q9Y2K3 1946 aa21.08■□□□□ 0.96
CD40-206ENST00000489304 SPDYE2BA6NHP3 402 aa21.07■□□□□ 0.96
CD40-206ENST00000489304 SPDYE6P0CI01 402 aa21.07■□□□□ 0.96
CD40-206ENST00000489304 RXRAP19793 462 aa21.07■□□□□ 0.96
CD40-206ENST00000489304 EIF6P56537 245 aaKnown RBP21.07■□□□□ 0.96
CD40-206ENST00000489304 DLGAP5Q15398 846 aa21.07■□□□□ 0.96
CD40-206ENST00000489304 NTRK3Q16288 839 aa21.07■□□□□ 0.96
CD40-206ENST00000489304 RGS22Q8NE09 1264 aa21.07■□□□□ 0.96
CD40-206ENST00000489304 MYL10Q9BUA6 226 aa21.07■□□□□ 0.96
CD40-206ENST00000489304 IDI2Q9BXS1 227 aa21.07■□□□□ 0.96
CD40-206ENST00000489304 MYH8P13535 1937 aa21.07■□□□□ 0.96
CD40-206ENST00000489304 CLRN2A0PK11 232 aa21.07■□□□□ 0.96
CD40-206ENST00000489304 TSPY2A6NKD2 308 aa21.07■□□□□ 0.96
CD40-206ENST00000489304 H3BQV1 296 aa21.07■□□□□ 0.96
CD40-206ENST00000489304 NMT2O60551 498 aa21.07■□□□□ 0.96
CD40-206ENST00000489304 CDK8P49336 464 aa21.07■□□□□ 0.96
CD40-206ENST00000489304 PPP2R5BQ15173 497 aa21.07■□□□□ 0.96
CD40-206ENST00000489304 IFIT1BQ5T764 474 aaKnown RBP21.07■□□□□ 0.96
CD40-206ENST00000489304 IFFO2Q5TF58 517 aa21.07■□□□□ 0.96
CD40-206ENST00000489304 SH3BP5LQ7L8J4 393 aa21.07■□□□□ 0.96
CD40-206ENST00000489304 OGFOD1Q8N543 542 aa21.07■□□□□ 0.96
CD40-206ENST00000489304 MKNK2Q9HBH9 465 aa21.07■□□□□ 0.96
CD40-206ENST00000489304 ORC3Q9UBD5 711 aaPredicted RBP21.07■□□□□ 0.96
CD40-206ENST00000489304 GMPSP49915 693 aaPredicted RBP21.06■□□□□ 0.96
CD40-206ENST00000489304 DDTLA6NHG4 134 aaPredicted RBP21.05■□□□□ 0.96
CD40-206ENST00000489304 LMNB1P20700 586 aa21.05■□□□□ 0.96
CD40-206ENST00000489304 RASA1P20936 1047 aa21.05■□□□□ 0.96
CD40-206ENST00000489304 TFAP4Q01664 338 aa21.05■□□□□ 0.96
CD40-206ENST00000489304 RTN1Q16799 776 aa21.05■□□□□ 0.96
CD40-206ENST00000489304 CCDC178Q5BJE1 867 aa21.05■□□□□ 0.96
CD40-206ENST00000489304 TTC6Q86TZ1 520 aa21.05■□□□□ 0.96
CD40-206ENST00000489304 CCDC144CPQ8IYA2 1237 aa21.05■□□□□ 0.96
CD40-206ENST00000489304 FANCBQ8NB91 859 aa21.05■□□□□ 0.96
CD40-206ENST00000489304 TCP11L1Q9NUJ3 509 aa21.05■□□□□ 0.96
CD40-206ENST00000489304 ZNF70Q9UC06 446 aaPredicted RBP21.05■□□□□ 0.96
CD40-206ENST00000489304 MYH6P13533 1939 aa21.05■□□□□ 0.96
CD40-206ENST00000489304 CCDC196A0A1B0GTZ2 297 aa21.04■□□□□ 0.96
CD40-206ENST00000489304 PPFIA3O75145 1194 aa21.04■□□□□ 0.96
CD40-206ENST00000489304 PRPF40AO75400 957 aaKnown RBP21.04■□□□□ 0.96
CD40-206ENST00000489304 IFNAR1P17181 557 aa21.04■□□□□ 0.96
CD40-206ENST00000489304 GABPAQ06546 454 aa21.04■□□□□ 0.96
CD40-206ENST00000489304 ZNF444Q8N0Y2 327 aaPredicted RBP21.04■□□□□ 0.96
CD40-206ENST00000489304 TMEM87AQ8NBN3 555 aa21.04■□□□□ 0.96
CD40-206ENST00000489304 ANKS1AQ92625 1134 aa21.04■□□□□ 0.96
CD40-206ENST00000489304 ZBED3Q96IU2 234 aaPredicted RBP21.04■□□□□ 0.96
CD40-206ENST00000489304 STK36Q9NRP7 1315 aa21.04■□□□□ 0.96
CD40-206ENST00000489304 EGFRP00533 1210 aa21.04■□□□□ 0.96
CD40-206ENST00000489304 CALM1P0DP23 149 aa21.04■□□□□ 0.96
CD40-206ENST00000489304 CALM2P0DP24 149 aa21.04■□□□□ 0.96
CD40-206ENST00000489304 CALM3P0DP25 149 aa21.04■□□□□ 0.96
CD40-206ENST00000489304 RESTQ13127 1097 aa21.04■□□□□ 0.96
CD40-206ENST00000489304 FOXD4L6Q3SYB3 417 aaPredicted RBP21.04■□□□□ 0.96
CD40-206ENST00000489304 RBM26Q5T8P6 1007 aaKnown RBP21.04■□□□□ 0.96
CD40-206ENST00000489304 FOXD4L3Q6VB84 417 aaPredicted RBP21.04■□□□□ 0.96
CD40-206ENST00000489304 CATIPQ7Z7H3 387 aa21.04■□□□□ 0.96
CD40-206ENST00000489304 FERMT3Q86UX7 667 aa21.04■□□□□ 0.96
CD40-206ENST00000489304 ZSCAN16Q9H4T2 348 aaPredicted RBP21.04■□□□□ 0.96
CD40-206ENST00000489304 TCP10L2B9ZVM9 353 aa21.03■□□□□ 0.96
CD40-206ENST00000489304 NPM3O75607 178 aaKnown RBP21.03■□□□□ 0.96
CD40-206ENST00000489304 DDAH1O94760 285 aa21.03■□□□□ 0.96
CD40-206ENST00000489304 NBPF9Q3BBW0 867 aa21.03■□□□□ 0.96
CD40-206ENST00000489304 RCSD1Q6JBY9 416 aa21.03■□□□□ 0.96
CD40-206ENST00000489304 DGKHQ86XP1 1220 aa21.03■□□□□ 0.96
CD40-206ENST00000489304 MTMR14Q8NCE2 650 aa21.03■□□□□ 0.96
CD40-206ENST00000489304 MYOZ2Q9NPC6 264 aa21.03■□□□□ 0.96
CD40-206ENST00000489304 IL17RBQ9NRM6 502 aa21.03■□□□□ 0.96
CD40-206ENST00000489304 ZNF280AP59817 542 aaPredicted RBP21.02■□□□□ 0.96
CD40-206ENST00000489304 KLHL40Q2TBA0 621 aa21.02■□□□□ 0.96
CD40-206ENST00000489304 CNPY2Q9Y2B0 182 aa21.02■□□□□ 0.96
CD40-206ENST00000489304 RPS12P25398 132 aaKnown RBP21.01■□□□□ 0.95
CD40-206ENST00000489304 DNM1Q05193 864 aaKnown RBP21.01■□□□□ 0.95
CD40-206ENST00000489304 TROAPQ12815 778 aa21.01■□□□□ 0.95
CD40-206ENST00000489304 SPDYE2Q495Y8 402 aa21.01■□□□□ 0.95
CD40-206ENST00000489304 MICALL2Q8IY33 904 aa21.01■□□□□ 0.95
CD40-206ENST00000489304 SIPA1L1O43166 1804 aa21.01■□□□□ 0.95
CD40-206ENST00000489304 FAM196BA6NMK8 535 aa21.01■□□□□ 0.95
CD40-206ENST00000489304 WNT10BO00744 389 aa21.01■□□□□ 0.95
CD40-206ENST00000489304 FMNL1O95466 1100 aaPredicted RBP21.01■□□□□ 0.95
CD40-206ENST00000489304 TSPY3P0CV98 308 aa21.01■□□□□ 0.95
CD40-206ENST00000489304 TSPY8P0CW00 308 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms