RNA–Protein interactions for RNA: ENST00000489283.5

PLS3-207, Transcript of plastin 3, humanhuman

TSL 1 (best)

Gene PLS3, Length 926 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLS3-207ENST00000489283 WDR18Q9BV38 432 aa17.09■□□□□ 0.33
PLS3-207ENST00000489283 ZBTB21Q9ULJ3 1066 aa17.09■□□□□ 0.33
PLS3-207ENST00000489283 PLXNB2O15031 1838 aa17.09■□□□□ 0.33
PLS3-207ENST00000489283 IFIT2P09913 472 aaKnown RBP17.08■□□□□ 0.32
PLS3-207ENST00000489283 PABPC4Q13310 644 aaKnown RBP eCLIP17.08■□□□□ 0.32
PLS3-207ENST00000489283 TTF1Q15361 905 aaPredicted RBP17.08■□□□□ 0.32
PLS3-207ENST00000489283 TMED8Q6PL24 325 aaPredicted RBP17.08■□□□□ 0.32
PLS3-207ENST00000489283 SLAIN1Q8ND83 568 aa17.08■□□□□ 0.32
PLS3-207ENST00000489283 BCL11AQ9H165 835 aa17.08■□□□□ 0.32
PLS3-207ENST00000489283 FLT3LGP49771 235 aa17.07■□□□□ 0.32
PLS3-207ENST00000489283 BACE1P56817 501 aa17.07■□□□□ 0.32
PLS3-207ENST00000489283 C20orf194Q5TEA3 1177 aa17.07■□□□□ 0.32
PLS3-207ENST00000489283 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.07■□□□□ 0.32
PLS3-207ENST00000489283 SHISA4Q96DD7 197 aa17.07■□□□□ 0.32
PLS3-207ENST00000489283 DNAJC2Q99543 621 aaKnown RBP17.07■□□□□ 0.32
PLS3-207ENST00000489283 RIOK1Q9BRS2 568 aaKnown RBP17.07■□□□□ 0.32
PLS3-207ENST00000489283 ASCC2Q9H1I8 757 aaPredicted RBP17.07■□□□□ 0.32
PLS3-207ENST00000489283 CHMP4BQ9H444 224 aaKnown RBP17.07■□□□□ 0.32
PLS3-207ENST00000489283 GINM1Q9NU53 330 aa17.07■□□□□ 0.32
PLS3-207ENST00000489283 BAZ2AQ9UIF9 1905 aaKnown RBP17.07■□□□□ 0.32
PLS3-207ENST00000489283 GOLIM4O00461 696 aa17.06■□□□□ 0.32
PLS3-207ENST00000489283 RAB11FIP3O75154 756 aa17.06■□□□□ 0.32
PLS3-207ENST00000489283 CCL5P13501 91 aa17.06■□□□□ 0.32
PLS3-207ENST00000489283 PDE6AP16499 860 aa17.06■□□□□ 0.32
PLS3-207ENST00000489283 GCLCP48506 637 aaPredicted RBP17.06■□□□□ 0.32
PLS3-207ENST00000489283 UBXN2AP68543 259 aa17.06■□□□□ 0.32
PLS3-207ENST00000489283 EHD4Q9H223 541 aa17.06■□□□□ 0.32
PLS3-207ENST00000489283 TMOD4Q9NZQ9 345 aa17.06■□□□□ 0.32
PLS3-207ENST00000489283 BIN2Q9UBW5 565 aaPredicted RBP17.06■□□□□ 0.32
PLS3-207ENST00000489283 MAGEB6P1A0A0J9YX57 407 aa17.05■□□□□ 0.32
PLS3-207ENST00000489283 ADCY3O60266 1144 aa17.05■□□□□ 0.32
PLS3-207ENST00000489283 IRX3P78415 501 aaPredicted RBP17.05■□□□□ 0.32
PLS3-207ENST00000489283 SLC9C2Q5TAH2 1124 aa17.05■□□□□ 0.32
PLS3-207ENST00000489283 TATDN1Q6P1N9 297 aa17.05■□□□□ 0.32
PLS3-207ENST00000489283 COA7Q96BR5 231 aa17.05■□□□□ 0.32
PLS3-207ENST00000489283 EDC3Q96F86 508 aaKnown RBP17.05■□□□□ 0.32
PLS3-207ENST00000489283 SERPINB13Q9UIV8 391 aa17.05■□□□□ 0.32
PLS3-207ENST00000489283 ZNF532Q9HCE3 1301 aa17.04■□□□□ 0.32
PLS3-207ENST00000489283 C19orf81C9J6K1 198 aa17.04■□□□□ 0.32
PLS3-207ENST00000489283 USP17L10C9JJH3 530 aa17.04■□□□□ 0.32
PLS3-207ENST00000489283 GH2P01242 217 aa17.04■□□□□ 0.32
PLS3-207ENST00000489283 ELNP15502 786 aa17.04■□□□□ 0.32
PLS3-207ENST00000489283 IRF5Q13568 498 aa17.04■□□□□ 0.32
PLS3-207ENST00000489283 RNF208Q9H0X6 261 aa17.04■□□□□ 0.32
PLS3-207ENST00000489283 TAOK2Q9UL54 1235 aa17.04■□□□□ 0.32
PLS3-207ENST00000489283 TCRBV5S4A2TA0A5A2 114 aa17.03■□□□□ 0.32
PLS3-207ENST00000489283 INHAP05111 366 aa17.03■□□□□ 0.32
PLS3-207ENST00000489283 PDE3AQ14432 1141 aa17.03■□□□□ 0.32
PLS3-207ENST00000489283 TTC6Q86TZ1 520 aa17.03■□□□□ 0.32
PLS3-207ENST00000489283 NKX2-3Q8TAU0 364 aa17.03■□□□□ 0.32
PLS3-207ENST00000489283 PXYLP1Q8TE99 480 aa17.03■□□□□ 0.32
PLS3-207ENST00000489283 UNC93B1Q9H1C4 597 aa17.03■□□□□ 0.32
PLS3-207ENST00000489283 GJB1P08034 283 aa17.02■□□□□ 0.32
PLS3-207ENST00000489283 HOXA7P31268 230 aaPredicted RBP17.02■□□□□ 0.32
PLS3-207ENST00000489283 GJA8P48165 433 aa17.02■□□□□ 0.32
PLS3-207ENST00000489283 PLCD1P51178 756 aa17.02■□□□□ 0.32
PLS3-207ENST00000489283 LCORLQ8N3X6 602 aa17.02■□□□□ 0.32
PLS3-207ENST00000489283 CRNKL1Q9BZJ0 848 aaKnown RBP17.02■□□□□ 0.32
PLS3-207ENST00000489283 BOLA2Q9H3K6 86 aa17.02■□□□□ 0.32
PLS3-207ENST00000489283 PAG1Q9NWQ8 432 aa17.02■□□□□ 0.32
PLS3-207ENST00000489283 MORF4L1Q9UBU8 362 aa17.02■□□□□ 0.32
PLS3-207ENST00000489283 PEX10O60683 326 aa17.01■□□□□ 0.31
PLS3-207ENST00000489283 POLR3DP05423 398 aaPredicted RBP17.01■□□□□ 0.31
PLS3-207ENST00000489283 ATP5JP18859 108 aa17.01■□□□□ 0.31
PLS3-207ENST00000489283 SHMT1P34896 483 aa17.01■□□□□ 0.31
PLS3-207ENST00000489283 HERVK_113P62684 666 aa17.01■□□□□ 0.31
PLS3-207ENST00000489283 EVX2Q03828 476 aa17.01■□□□□ 0.31
PLS3-207ENST00000489283 RAB3GAP1Q15042 981 aa17.01■□□□□ 0.31
PLS3-207ENST00000489283 ZYXQ15942 572 aaKnown RBP17.01■□□□□ 0.31
PLS3-207ENST00000489283 CERKLQ49MI3 558 aaPredicted RBP17.01■□□□□ 0.31
PLS3-207ENST00000489283 USP17L2Q6R6M4 530 aa17.01■□□□□ 0.31
PLS3-207ENST00000489283 SDR42E1Q8WUS8 393 aa17.01■□□□□ 0.31
PLS3-207ENST00000489283 P2RX7Q99572 595 aaKnown RBP17.01■□□□□ 0.31
PLS3-207ENST00000489283 FEZ1Q99689 392 aa17.01■□□□□ 0.31
PLS3-207ENST00000489283 EMILIN3Q9NT22 766 aa17.01■□□□□ 0.31
PLS3-207ENST00000489283 ABCB5Q2M3G0 1257 aa17■□□□□ 0.31
PLS3-207ENST00000489283 SLFNL1Q499Z3 407 aa17■□□□□ 0.31
PLS3-207ENST00000489283 U2AF1L4Q8WU68 220 aaKnown RBP17■□□□□ 0.31
PLS3-207ENST00000489283 GCC1Q96CN9 775 aa17■□□□□ 0.31
PLS3-207ENST00000489283 C12orf42Q96LP6 360 aa17■□□□□ 0.31
PLS3-207ENST00000489283 HAUS7Q99871 368 aa17■□□□□ 0.31
PLS3-207ENST00000489283 LRRCC1Q9C099 1032 aa17■□□□□ 0.31
PLS3-207ENST00000489283 TXNRD2Q9NNW7 524 aa17■□□□□ 0.31
PLS3-207ENST00000489283 MCM9Q9NXL9 1143 aa17■□□□□ 0.31
PLS3-207ENST00000489283 SMARCA5O60264 1052 aaPredicted RBP16.99■□□□□ 0.31
PLS3-207ENST00000489283 ADD2P35612 726 aa16.99■□□□□ 0.31
PLS3-207ENST00000489283 GABPAQ06546 454 aa16.99■□□□□ 0.31
PLS3-207ENST00000489283 ARMT1Q9H993 441 aa16.99■□□□□ 0.31
PLS3-207ENST00000489283 DCP1AQ9NPI6 582 aaPredicted RBP16.99■□□□□ 0.31
PLS3-207ENST00000489283 A0A0G2JMZ2 1700 aa16.99■□□□□ 0.31
PLS3-207ENST00000489283 ALPK3Q96L96 1907 aa16.98■□□□□ 0.31
PLS3-207ENST00000489283 MBD4O95243 580 aa16.98■□□□□ 0.31
PLS3-207ENST00000489283 UBE2Q1Q7Z7E8 422 aa16.98■□□□□ 0.31
PLS3-207ENST00000489283 GPRC5AQ8NFJ5 357 aa16.98■□□□□ 0.31
PLS3-207ENST00000489283 ACER1Q8TDN7 264 aa16.98■□□□□ 0.31
PLS3-207ENST00000489283 PAGR1Q9BTK6 254 aa16.98■□□□□ 0.31
PLS3-207ENST00000489283 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.98■□□□□ 0.31
PLS3-207ENST00000489283 CABP5Q9NP86 173 aa16.98■□□□□ 0.31
PLS3-207ENST00000489283 GJD2Q9UKL4 321 aa16.98■□□□□ 0.31
PLS3-207ENST00000489283 PARP14Q460N5 1801 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms