RNA–Protein interactions for RNA: ENST00000489261.1

ITSN1-231, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 1,108 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-231ENST00000489261 ZNF622Q969S3 477 aaKnown RBP eCLIP12.57□□□□□ -0.4
ITSN1-231ENST00000489261 RNF26Q9BY78 433 aaPredicted RBP12.57□□□□□ -0.4
ITSN1-231ENST00000489261 ZC3H12CQ9C0D7 883 aaKnown RBP12.57□□□□□ -0.4
ITSN1-231ENST00000489261 GPBP1L1Q9HC44 474 aaPredicted RBP12.57□□□□□ -0.4
ITSN1-231ENST00000489261 SENP2Q9HC62 589 aa12.57□□□□□ -0.4
ITSN1-231ENST00000489261 TCP11L1Q9NUJ3 509 aa12.57□□□□□ -0.4
ITSN1-231ENST00000489261 NFKBIEO00221 500 aa12.56□□□□□ -0.4
ITSN1-231ENST00000489261 PRPF3O43395 683 aaKnown RBP12.56□□□□□ -0.4
ITSN1-231ENST00000489261 U2AF2P26368 475 aaKnown RBP eCLIP12.56□□□□□ -0.4
ITSN1-231ENST00000489261 PRELPP51888 382 aa12.56□□□□□ -0.4
ITSN1-231ENST00000489261 C1QTNF8P60827 252 aa12.56□□□□□ -0.4
ITSN1-231ENST00000489261 GNL2Q13823 731 aaKnown RBP12.56□□□□□ -0.4
ITSN1-231ENST00000489261 SF3A1Q15459 793 aaKnown RBP12.56□□□□□ -0.4
ITSN1-231ENST00000489261 GRIPAP1Q4V328 841 aa12.56□□□□□ -0.4
ITSN1-231ENST00000489261 HS1BP3Q53T59 392 aa12.56□□□□□ -0.4
ITSN1-231ENST00000489261 MYSM1Q5VVJ2 828 aa12.56□□□□□ -0.4
ITSN1-231ENST00000489261 RBM43Q6ZSC3 357 aaKnown RBP12.56□□□□□ -0.4
ITSN1-231ENST00000489261 NKX2-3Q8TAU0 364 aa12.56□□□□□ -0.4
ITSN1-231ENST00000489261 PGBD1Q96JS3 809 aa12.56□□□□□ -0.4
ITSN1-231ENST00000489261 USP28Q96RU2 1077 aa12.56□□□□□ -0.4
ITSN1-231ENST00000489261 MRIQ9BWK5 157 aa12.56□□□□□ -0.4
ITSN1-231ENST00000489261 SLC26A6Q9BXS9 759 aa12.56□□□□□ -0.4
ITSN1-231ENST00000489261 CLSTN2Q9H4D0 955 aa12.56□□□□□ -0.4
ITSN1-231ENST00000489261 MCM9Q9NXL9 1143 aa12.56□□□□□ -0.4
ITSN1-231ENST00000489261 ZC3H4Q9UPT8 1303 aaKnown RBP12.56□□□□□ -0.4
ITSN1-231ENST00000489261 ROBO3Q96MS0 1386 aa12.56□□□□□ -0.4
ITSN1-231ENST00000489261 GNAQP50148 359 aa12.55□□□□□ -0.4
ITSN1-231ENST00000489261 FKBP1AP62942 108 aaKnown RBP12.55□□□□□ -0.4
ITSN1-231ENST00000489261 GUCY1B3Q02153 619 aa12.55□□□□□ -0.4
ITSN1-231ENST00000489261 STK38Q15208 465 aa12.55□□□□□ -0.4
ITSN1-231ENST00000489261 MFSD14BQ5SR56 506 aa12.55□□□□□ -0.4
ITSN1-231ENST00000489261 ANO1Q5XXA6 986 aa12.55□□□□□ -0.4
ITSN1-231ENST00000489261 CC2D2BQ6DHV5 1058 aa12.55□□□□□ -0.4
ITSN1-231ENST00000489261 CCDC73Q6ZRK6 1079 aa12.55□□□□□ -0.4
ITSN1-231ENST00000489261 NBPF11Q86T75 865 aa12.55□□□□□ -0.4
ITSN1-231ENST00000489261 RAB11FIP4Q86YS3 637 aa12.55□□□□□ -0.4
ITSN1-231ENST00000489261 ZNF444Q8N0Y2 327 aaPredicted RBP12.55□□□□□ -0.4
ITSN1-231ENST00000489261 ENAHQ8N8S7 591 aaPredicted RBP12.55□□□□□ -0.4
ITSN1-231ENST00000489261 LINC00301Q8NCQ3 95 aa12.55□□□□□ -0.4
ITSN1-231ENST00000489261 C7orf43Q8WVR3 580 aa12.55□□□□□ -0.4
ITSN1-231ENST00000489261 TRIM44Q96DX7 344 aaPredicted RBP12.55□□□□□ -0.4
ITSN1-231ENST00000489261 ZKSCAN3Q9BRR0 538 aa12.55□□□□□ -0.4
ITSN1-231ENST00000489261 FUCA2Q9BTY2 467 aa12.55□□□□□ -0.4
ITSN1-231ENST00000489261 RTFDC1Q9BY42 306 aaPredicted RBP12.55□□□□□ -0.4
ITSN1-231ENST00000489261 PANK2Q9BZ23 570 aa12.55□□□□□ -0.4
ITSN1-231ENST00000489261 TNMDQ9H2S6 317 aa12.55□□□□□ -0.4
ITSN1-231ENST00000489261 FOXP1Q9H334 677 aaPredicted RBP12.55□□□□□ -0.4
ITSN1-231ENST00000489261 RNF181Q9P0P0 153 aa12.55□□□□□ -0.4
ITSN1-231ENST00000489261 TAOK2Q9UL54 1235 aa12.55□□□□□ -0.4
ITSN1-231ENST00000489261 GAKO14976 1311 aa12.55□□□□□ -0.4
ITSN1-231ENST00000489261 LTBP3Q9NS15 1303 aa12.55□□□□□ -0.4
ITSN1-231ENST00000489261 SNED1Q8TER0 1413 aa12.54□□□□□ -0.4
ITSN1-231ENST00000489261 TSPY2A6NKD2 308 aa12.54□□□□□ -0.4
ITSN1-231ENST00000489261 KIF3CO14782 793 aa12.54□□□□□ -0.4
ITSN1-231ENST00000489261 SPTLC2O15270 562 aa12.54□□□□□ -0.4
ITSN1-231ENST00000489261 C21orf2O43822 256 aa12.54□□□□□ -0.4
ITSN1-231ENST00000489261 PPP6R2O75170 966 aa12.54□□□□□ -0.4
ITSN1-231ENST00000489261 POLR3DP05423 398 aaPredicted RBP12.54□□□□□ -0.4
ITSN1-231ENST00000489261 LIG1P18858 919 aa12.54□□□□□ -0.4
ITSN1-231ENST00000489261 KIF5BP33176 963 aa12.54□□□□□ -0.4
ITSN1-231ENST00000489261 FOSBP53539 338 aa12.54□□□□□ -0.4
ITSN1-231ENST00000489261 DPP8Q6V1X1 898 aaPredicted RBP12.54□□□□□ -0.4
ITSN1-231ENST00000489261 PODNQ7Z5L7 613 aa12.54□□□□□ -0.4
ITSN1-231ENST00000489261 CCAR1Q8IX12 1150 aaKnown RBP12.54□□□□□ -0.4
ITSN1-231ENST00000489261 FAM177A1Q8N128 213 aaPredicted RBP12.54□□□□□ -0.4
ITSN1-231ENST00000489261 CTCFLQ8NI51 663 aaPredicted RBP12.54□□□□□ -0.4
ITSN1-231ENST00000489261 SH3RF3Q8TEJ3 882 aaPredicted RBP12.54□□□□□ -0.4
ITSN1-231ENST00000489261 ZNF526Q8TF50 670 aaPredicted RBP12.54□□□□□ -0.4
ITSN1-231ENST00000489261 NUP133Q8WUM0 1156 aa12.54□□□□□ -0.4
ITSN1-231ENST00000489261 PHKBQ93100 1093 aa12.54□□□□□ -0.4
ITSN1-231ENST00000489261 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.54□□□□□ -0.4
ITSN1-231ENST00000489261 MKNK2Q9HBH9 465 aa12.54□□□□□ -0.4
ITSN1-231ENST00000489261 DACT1Q9NYF0 836 aa12.54□□□□□ -0.4
ITSN1-231ENST00000489261 MORC2Q9Y6X9 1032 aaPredicted RBP12.54□□□□□ -0.4
ITSN1-231ENST00000489261 LRRC37AA6NMS7 1700 aa12.54□□□□□ -0.4
ITSN1-231ENST00000489261 CYP2D7A0A087X1C5 515 aa12.53□□□□□ -0.4
ITSN1-231ENST00000489261 G3V3G9 751 aa12.53□□□□□ -0.4
ITSN1-231ENST00000489261 MMP1P03956 469 aa12.53□□□□□ -0.4
ITSN1-231ENST00000489261 RXRAP19793 462 aa12.53□□□□□ -0.4
ITSN1-231ENST00000489261 LMNB1P20700 586 aa12.53□□□□□ -0.4
ITSN1-231ENST00000489261 BTDP43251 543 aa12.53□□□□□ -0.4
ITSN1-231ENST00000489261 ME1P48163 572 aa12.53□□□□□ -0.4
ITSN1-231ENST00000489261 FAM160A1Q05DH4 1040 aa12.53□□□□□ -0.4
ITSN1-231ENST00000489261 TROAPQ12815 778 aa12.53□□□□□ -0.4
ITSN1-231ENST00000489261 SLC39A14Q15043 492 aa12.53□□□□□ -0.4
ITSN1-231ENST00000489261 DCAF8Q5TAQ9 597 aa12.53□□□□□ -0.4
ITSN1-231ENST00000489261 SOGA3Q5TF21 947 aa12.53□□□□□ -0.4
ITSN1-231ENST00000489261 OTUD7BQ6GQQ9 843 aa12.53□□□□□ -0.4
ITSN1-231ENST00000489261 CCDC144CPQ8IYA2 1237 aa12.53□□□□□ -0.4
ITSN1-231ENST00000489261 FAM43AQ8N2R8 423 aa12.53□□□□□ -0.4
ITSN1-231ENST00000489261 TGFBRAP1Q8WUH2 860 aa12.53□□□□□ -0.4
ITSN1-231ENST00000489261 MRPS27Q92552 414 aaKnown RBP12.53□□□□□ -0.4
ITSN1-231ENST00000489261 LZTS2Q9BRK4 669 aa12.53□□□□□ -0.4
ITSN1-231ENST00000489261 MYL10Q9BUA6 226 aa12.53□□□□□ -0.4
ITSN1-231ENST00000489261 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.53□□□□□ -0.4
ITSN1-231ENST00000489261 PCDHA7Q9UN72 937 aa12.53□□□□□ -0.4
ITSN1-231ENST00000489261 WDR90Q96KV7 1748 aa12.53□□□□□ -0.4
ITSN1-231ENST00000489261 USP17L8P0C7I0 530 aa12.52□□□□□ -0.41
ITSN1-231ENST00000489261 CMA1P23946 247 aa12.52□□□□□ -0.41
ITSN1-231ENST00000489261 TFAP4Q01664 338 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms