RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 BACE1P56817 501 aa15.22■□□□□ 0.03
SRRM1-216ENST00000489130 SHROOM1Q2M3G4 852 aaPredicted RBP15.22■□□□□ 0.03
SRRM1-216ENST00000489130 SLC4A8Q2Y0W8 1093 aa15.22■□□□□ 0.03
SRRM1-216ENST00000489130 TATDN1Q6P1N9 297 aa15.22■□□□□ 0.03
SRRM1-216ENST00000489130 BCL11AQ9H165 835 aa15.22■□□□□ 0.03
SRRM1-216ENST00000489130 BOLA2Q9H3K6 86 aa15.22■□□□□ 0.03
SRRM1-216ENST00000489130 PAG1Q9NWQ8 432 aa15.22■□□□□ 0.03
SRRM1-216ENST00000489130 SERPINB13Q9UIV8 391 aa15.22■□□□□ 0.03
SRRM1-216ENST00000489130 MYPNQ86TC9 1320 aa15.21■□□□□ 0.03
SRRM1-216ENST00000489130 ECM2O94769 699 aaPredicted RBP15.21■□□□□ 0.03
SRRM1-216ENST00000489130 PABPC4Q13310 644 aaKnown RBP eCLIP15.21■□□□□ 0.03
SRRM1-216ENST00000489130 MTMR2Q13614 643 aa15.21■□□□□ 0.03
SRRM1-216ENST00000489130 TTC6Q86TZ1 520 aa15.21■□□□□ 0.03
SRRM1-216ENST00000489130 SH3TC2Q8TF17 1288 aa15.21■□□□□ 0.03
SRRM1-216ENST00000489130 CRNKL1Q9BZJ0 848 aaKnown RBP15.21■□□□□ 0.03
SRRM1-216ENST00000489130 DCTPP1Q9H773 170 aa15.21■□□□□ 0.03
SRRM1-216ENST00000489130 MYH1P12882 1939 aa15.2■□□□□ 0.02
SRRM1-216ENST00000489130 C19orf81C9J6K1 198 aa15.2■□□□□ 0.02
SRRM1-216ENST00000489130 SMARCA5O60264 1052 aaPredicted RBP15.2■□□□□ 0.02
SRRM1-216ENST00000489130 ADD2P35612 726 aa15.2■□□□□ 0.02
SRRM1-216ENST00000489130 USP17L10C9JJH3 530 aa15.19■□□□□ 0.02
SRRM1-216ENST00000489130 GH2P01242 217 aa15.19■□□□□ 0.02
SRRM1-216ENST00000489130 GCLCP48506 637 aaPredicted RBP15.19■□□□□ 0.02
SRRM1-216ENST00000489130 PLCD1P51178 756 aa15.19■□□□□ 0.02
SRRM1-216ENST00000489130 PRKCZQ05513 592 aa15.19■□□□□ 0.02
SRRM1-216ENST00000489130 GABPAQ06546 454 aa15.19■□□□□ 0.02
SRRM1-216ENST00000489130 FAM110CQ1W6H9 321 aa15.19■□□□□ 0.02
SRRM1-216ENST00000489130 LCORLQ8N3X6 602 aa15.19■□□□□ 0.02
SRRM1-216ENST00000489130 ANKRD13CQ8N6S4 541 aa15.19■□□□□ 0.02
SRRM1-216ENST00000489130 RAET1EQ8TD07 263 aa15.19■□□□□ 0.02
SRRM1-216ENST00000489130 TMEM106CQ9BVX2 250 aa15.19■□□□□ 0.02
SRRM1-216ENST00000489130 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.19■□□□□ 0.02
SRRM1-216ENST00000489130 ASCC2Q9H1I8 757 aaPredicted RBP15.19■□□□□ 0.02
SRRM1-216ENST00000489130 TMOD4Q9NZQ9 345 aa15.19■□□□□ 0.02
SRRM1-216ENST00000489130 MKI67P46013 3256 aaKnown RBP15.19■□□□□ 0.02
SRRM1-216ENST00000489130 NAV1Q8NEY1 1877 aa15.18■□□□□ 0.02
SRRM1-216ENST00000489130 POLR3DP05423 398 aaPredicted RBP15.18■□□□□ 0.02
SRRM1-216ENST00000489130 HOXA7P31268 230 aaPredicted RBP15.18■□□□□ 0.02
SRRM1-216ENST00000489130 SHMT1P34896 483 aa15.18■□□□□ 0.02
SRRM1-216ENST00000489130 RRP1P56182 461 aaKnown RBP15.18■□□□□ 0.02
SRRM1-216ENST00000489130 SDR42E1Q8WUS8 393 aa15.18■□□□□ 0.02
SRRM1-216ENST00000489130 DCP1AQ9NPI6 582 aaPredicted RBP15.18■□□□□ 0.02
SRRM1-216ENST00000489130 ECHDC1Q9NTX5 307 aa15.18■□□□□ 0.02
SRRM1-216ENST00000489130 MCM9Q9NXL9 1143 aa15.18■□□□□ 0.02
SRRM1-216ENST00000489130 MGAMO43451 1857 aa15.17■□□□□ 0.02
SRRM1-216ENST00000489130 TNPO2O14787 897 aaKnown RBP15.17■□□□□ 0.02
SRRM1-216ENST00000489130 EN2P19622 333 aaPredicted RBP15.17■□□□□ 0.02
SRRM1-216ENST00000489130 GRK4P32298 578 aa15.17■□□□□ 0.02
SRRM1-216ENST00000489130 UBE3CQ15386 1083 aa15.17■□□□□ 0.02
SRRM1-216ENST00000489130 SLFNL1Q499Z3 407 aa15.17■□□□□ 0.02
SRRM1-216ENST00000489130 CERKLQ49MI3 558 aaPredicted RBP15.17■□□□□ 0.02
SRRM1-216ENST00000489130 ARMT1Q9H993 441 aa15.17■□□□□ 0.02
SRRM1-216ENST00000489130 EMILIN3Q9NT22 766 aa15.17■□□□□ 0.02
SRRM1-216ENST00000489130 GABRQQ9UN88 632 aa15.17■□□□□ 0.02
SRRM1-216ENST00000489130 PCDHB15Q9Y5E8 787 aa15.17■□□□□ 0.02
SRRM1-216ENST00000489130 MBD4O95243 580 aa15.16■□□□□ 0.02
SRRM1-216ENST00000489130 FLT3LGP49771 235 aa15.16■□□□□ 0.02
SRRM1-216ENST00000489130 IRX3P78415 501 aaPredicted RBP15.16■□□□□ 0.02
SRRM1-216ENST00000489130 EVX2Q03828 476 aa15.16■□□□□ 0.02
SRRM1-216ENST00000489130 ABCB5Q2M3G0 1257 aa15.16■□□□□ 0.02
SRRM1-216ENST00000489130 SLAIN1Q8ND83 568 aa15.16■□□□□ 0.02
SRRM1-216ENST00000489130 C12orf42Q96LP6 360 aa15.16■□□□□ 0.02
SRRM1-216ENST00000489130 ATP8A2Q9NTI2 1148 aa15.16■□□□□ 0.02
SRRM1-216ENST00000489130 MORF4L1Q9UBU8 362 aa15.16■□□□□ 0.02
SRRM1-216ENST00000489130 TAOK2Q9UL54 1235 aa15.16■□□□□ 0.02
SRRM1-216ENST00000489130 MYCP01106 439 aaPredicted RBP15.15■□□□□ 0.02
SRRM1-216ENST00000489130 CHGBP05060 677 aa15.15■□□□□ 0.02
SRRM1-216ENST00000489130 IRF5Q13568 498 aa15.15■□□□□ 0.02
SRRM1-216ENST00000489130 RAB3GAP1Q15042 981 aa15.15■□□□□ 0.02
SRRM1-216ENST00000489130 MTFR1Q15390 333 aa15.15■□□□□ 0.02
SRRM1-216ENST00000489130 PRPF38BQ5VTL8 546 aaKnown RBP15.15■□□□□ 0.02
SRRM1-216ENST00000489130 ZSCAN25Q6NSZ9 544 aa15.15■□□□□ 0.02
SRRM1-216ENST00000489130 USP17L2Q6R6M4 530 aa15.15■□□□□ 0.02
SRRM1-216ENST00000489130 GPATCH3Q96I76 525 aa15.15■□□□□ 0.02
SRRM1-216ENST00000489130 PRKAB2O43741 272 aa15.14■□□□□ 0.01
SRRM1-216ENST00000489130 HERVK_113P62684 666 aa15.14■□□□□ 0.01
SRRM1-216ENST00000489130 PXYLP1Q8TE99 480 aa15.14■□□□□ 0.01
SRRM1-216ENST00000489130 COA7Q96BR5 231 aa15.14■□□□□ 0.01
SRRM1-216ENST00000489130 P2RX7Q99572 595 aaKnown RBP15.14■□□□□ 0.01
SRRM1-216ENST00000489130 FEZ1Q99689 392 aa15.14■□□□□ 0.01
SRRM1-216ENST00000489130 KIAA1683Q9H0B3 1180 aa15.14■□□□□ 0.01
SRRM1-216ENST00000489130 CABP5Q9NP86 173 aa15.14■□□□□ 0.01
SRRM1-216ENST00000489130 SWAP70Q9UH65 585 aa15.14■□□□□ 0.01
SRRM1-216ENST00000489130 KIAA0100Q14667 2235 aaKnown RBP15.13■□□□□ 0.01
SRRM1-216ENST00000489130 ADCY3O60266 1144 aa15.13■□□□□ 0.01
SRRM1-216ENST00000489130 CYP2D6P10635 497 aa15.13■□□□□ 0.01
SRRM1-216ENST00000489130 GUCY1A2P33402 732 aa15.13■□□□□ 0.01
SRRM1-216ENST00000489130 USP14P54578 494 aa15.13■□□□□ 0.01
SRRM1-216ENST00000489130 UBXN2AP68543 259 aa15.13■□□□□ 0.01
SRRM1-216ENST00000489130 KBTBD3Q8NAB2 608 aa15.13■□□□□ 0.01
SRRM1-216ENST00000489130 GTF3C2Q8WUA4 911 aaPredicted RBP15.13■□□□□ 0.01
SRRM1-216ENST00000489130 PUS7LQ9H0K6 701 aaKnown RBP15.13■□□□□ 0.01
SRRM1-216ENST00000489130 PDE4DIPQ5VU43 2346 aa15.12■□□□□ 0.01
SRRM1-216ENST00000489130 MYH7P12883 1935 aa15.12■□□□□ 0.01
SRRM1-216ENST00000489130 CCL5P13501 91 aa15.12■□□□□ 0.01
SRRM1-216ENST00000489130 ZYXQ15942 572 aaKnown RBP15.12■□□□□ 0.01
SRRM1-216ENST00000489130 TSHZ3Q63HK5 1081 aa15.12■□□□□ 0.01
SRRM1-216ENST00000489130 SLC44A5Q8NCS7 719 aa15.12■□□□□ 0.01
SRRM1-216ENST00000489130 ACER1Q8TDN7 264 aa15.12■□□□□ 0.01
SRRM1-216ENST00000489130 TXNRD2Q9NNW7 524 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms