RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 SERPINB13Q9UIV8 391 aa14.47□□□□□ -0.09
CCHCR1-215ENST00000488920 ZBTB21Q9ULJ3 1066 aa14.47□□□□□ -0.09
CCHCR1-215ENST00000488920 DOCK1Q14185 1865 aa14.46□□□□□ -0.09
CCHCR1-215ENST00000488920 ZSWIM8A7E2V4 1837 aa14.46□□□□□ -0.09
CCHCR1-215ENST00000488920 GH2P01242 217 aa14.46□□□□□ -0.09
CCHCR1-215ENST00000488920 POLR3DP05423 398 aaPredicted RBP14.46□□□□□ -0.09
CCHCR1-215ENST00000488920 GRK4P32298 578 aa14.46□□□□□ -0.09
CCHCR1-215ENST00000488920 PLCD1P51178 756 aa14.46□□□□□ -0.09
CCHCR1-215ENST00000488920 PABPC4Q13310 644 aaKnown RBP eCLIP14.46□□□□□ -0.09
CCHCR1-215ENST00000488920 TATDN1Q6P1N9 297 aa14.46□□□□□ -0.09
CCHCR1-215ENST00000488920 HAUS7Q99871 368 aa14.46□□□□□ -0.09
CCHCR1-215ENST00000488920 CRNKL1Q9BZJ0 848 aaKnown RBP14.46□□□□□ -0.09
CCHCR1-215ENST00000488920 GINM1Q9NU53 330 aa14.46□□□□□ -0.09
CCHCR1-215ENST00000488920 BIN2Q9UBW5 565 aaPredicted RBP14.46□□□□□ -0.09
CCHCR1-215ENST00000488920 MAST2Q6P0Q8 1798 aa14.46□□□□□ -0.09
CCHCR1-215ENST00000488920 C19orf81C9J6K1 198 aa14.45□□□□□ -0.1
CCHCR1-215ENST00000488920 USP17L10C9JJH3 530 aa14.45□□□□□ -0.1
CCHCR1-215ENST00000488920 TNPO2O14787 897 aaKnown RBP14.45□□□□□ -0.1
CCHCR1-215ENST00000488920 FLT3LGP49771 235 aa14.45□□□□□ -0.1
CCHCR1-215ENST00000488920 MTFR1Q15390 333 aa14.45□□□□□ -0.1
CCHCR1-215ENST00000488920 LCORLQ8N3X6 602 aa14.45□□□□□ -0.1
CCHCR1-215ENST00000488920 EHD4Q9H223 541 aa14.45□□□□□ -0.1
CCHCR1-215ENST00000488920 MYO5AQ9Y4I1 1855 aaKnown RBP14.45□□□□□ -0.1
CCHCR1-215ENST00000488920 PHIPQ8WWQ0 1821 aa14.44□□□□□ -0.1
CCHCR1-215ENST00000488920 CHGBP05060 677 aa14.44□□□□□ -0.1
CCHCR1-215ENST00000488920 GCLCP48506 637 aaPredicted RBP14.44□□□□□ -0.1
CCHCR1-215ENST00000488920 EVX2Q03828 476 aa14.44□□□□□ -0.1
CCHCR1-215ENST00000488920 RAB3GAP1Q15042 981 aa14.44□□□□□ -0.1
CCHCR1-215ENST00000488920 FAM110CQ1W6H9 321 aa14.44□□□□□ -0.1
CCHCR1-215ENST00000488920 CERKLQ49MI3 558 aaPredicted RBP14.44□□□□□ -0.1
CCHCR1-215ENST00000488920 SDR42E1Q8WUS8 393 aa14.44□□□□□ -0.1
CCHCR1-215ENST00000488920 P2RX7Q99572 595 aaKnown RBP14.44□□□□□ -0.1
CCHCR1-215ENST00000488920 ARMT1Q9H993 441 aa14.44□□□□□ -0.1
CCHCR1-215ENST00000488920 EMILIN3Q9NT22 766 aa14.44□□□□□ -0.1
CCHCR1-215ENST00000488920 MCM9Q9NXL9 1143 aa14.44□□□□□ -0.1
CCHCR1-215ENST00000488920 MKI67P46013 3256 aaKnown RBP14.44□□□□□ -0.1
CCHCR1-215ENST00000488920 BRCA2P51587 3418 aa14.43□□□□□ -0.1
CCHCR1-215ENST00000488920 PRKAB2O43741 272 aa14.43□□□□□ -0.1
CCHCR1-215ENST00000488920 ADCY3O60266 1144 aa14.43□□□□□ -0.1
CCHCR1-215ENST00000488920 PEX10O60683 326 aa14.43□□□□□ -0.1
CCHCR1-215ENST00000488920 CYP2D6P10635 497 aa14.43□□□□□ -0.1
CCHCR1-215ENST00000488920 HOXA7P31268 230 aaPredicted RBP14.43□□□□□ -0.1
CCHCR1-215ENST00000488920 SHMT1P34896 483 aa14.43□□□□□ -0.1
CCHCR1-215ENST00000488920 ADD2P35612 726 aa14.43□□□□□ -0.1
CCHCR1-215ENST00000488920 IRX3P78415 501 aaPredicted RBP14.43□□□□□ -0.1
CCHCR1-215ENST00000488920 ZYXQ15942 572 aaKnown RBP14.43□□□□□ -0.1
CCHCR1-215ENST00000488920 ABCB5Q2M3G0 1257 aa14.43□□□□□ -0.1
CCHCR1-215ENST00000488920 PRPF38BQ5VTL8 546 aaKnown RBP14.43□□□□□ -0.1
CCHCR1-215ENST00000488920 COA7Q96BR5 231 aa14.43□□□□□ -0.1
CCHCR1-215ENST00000488920 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.43□□□□□ -0.15e-6■■□□□ 11.5
CCHCR1-215ENST00000488920 DCTPP1Q9H773 170 aa14.43□□□□□ -0.1
CCHCR1-215ENST00000488920 TAOK2Q9UL54 1235 aa14.43□□□□□ -0.1
CCHCR1-215ENST00000488920 SIPA1L1O43166 1804 aa14.43□□□□□ -0.1
CCHCR1-215ENST00000488920 MBD4O95243 580 aa14.42□□□□□ -0.1
CCHCR1-215ENST00000488920 CCL5P13501 91 aa14.42□□□□□ -0.1
CCHCR1-215ENST00000488920 ELNP15502 786 aa14.42□□□□□ -0.1
CCHCR1-215ENST00000488920 USP17L2Q6R6M4 530 aa14.42□□□□□ -0.1
CCHCR1-215ENST00000488920 SLAIN1Q8ND83 568 aa14.42□□□□□ -0.1
CCHCR1-215ENST00000488920 ACER1Q8TDN7 264 aa14.42□□□□□ -0.1
CCHCR1-215ENST00000488920 FEZ1Q99689 392 aa14.42□□□□□ -0.1
CCHCR1-215ENST00000488920 CABP5Q9NP86 173 aa14.42□□□□□ -0.1
CCHCR1-215ENST00000488920 DCP1AQ9NPI6 582 aaPredicted RBP14.42□□□□□ -0.1
CCHCR1-215ENST00000488920 ECHDC1Q9NTX5 307 aa14.42□□□□□ -0.1
CCHCR1-215ENST00000488920 PCDHB15Q9Y5E8 787 aa14.42□□□□□ -0.1
CCHCR1-215ENST00000488920 HERVK_113P62684 666 aa14.41□□□□□ -0.1
CCHCR1-215ENST00000488920 UBXN2AP68543 259 aa14.41□□□□□ -0.1
CCHCR1-215ENST00000488920 GABPAQ06546 454 aa14.41□□□□□ -0.1
CCHCR1-215ENST00000488920 TSHZ3Q63HK5 1081 aa14.41□□□□□ -0.1
CCHCR1-215ENST00000488920 RNF208Q9H0X6 261 aa14.41□□□□□ -0.1
CCHCR1-215ENST00000488920 KIAA0100Q14667 2235 aaKnown RBP14.4□□□□□ -0.1
CCHCR1-215ENST00000488920 MPHOSPH10O00566 681 aaKnown RBP14.4□□□□□ -0.1
CCHCR1-215ENST00000488920 GUCY1A2P33402 732 aa14.4□□□□□ -0.1
CCHCR1-215ENST00000488920 IRF5Q13568 498 aa14.4□□□□□ -0.1
CCHCR1-215ENST00000488920 SEPT2Q15019 361 aa14.4□□□□□ -0.1
CCHCR1-215ENST00000488920 UBE3CQ15386 1083 aa14.4□□□□□ -0.1
CCHCR1-215ENST00000488920 SLC44A5Q8NCS7 719 aa14.4□□□□□ -0.1
CCHCR1-215ENST00000488920 GPRC5AQ8NFJ5 357 aa14.4□□□□□ -0.1
CCHCR1-215ENST00000488920 DYNLL2Q96FJ2 89 aa14.4□□□□□ -0.1
CCHCR1-215ENST00000488920 UNC93B1Q9H1C4 597 aa14.4□□□□□ -0.1
CCHCR1-215ENST00000488920 TXNRD2Q9NNW7 524 aa14.4□□□□□ -0.1
CCHCR1-215ENST00000488920 RBPJLQ9UBG7 517 aa14.4□□□□□ -0.1
CCHCR1-215ENST00000488920 MORF4L1Q9UBU8 362 aa14.4□□□□□ -0.1
CCHCR1-215ENST00000488920 PTPRFP10586 1907 aa14.39□□□□□ -0.11
CCHCR1-215ENST00000488920 CYP2D7A0A087X1C5 515 aa14.39□□□□□ -0.11
CCHCR1-215ENST00000488920 SMIM22K7EJ46 135 aa14.39□□□□□ -0.11
CCHCR1-215ENST00000488920 INHAP05111 366 aa14.39□□□□□ -0.11
CCHCR1-215ENST00000488920 GJB1P08034 283 aa14.39□□□□□ -0.11
CCHCR1-215ENST00000488920 RRP1P56182 461 aaKnown RBP14.39□□□□□ -0.11
CCHCR1-215ENST00000488920 ZSCAN25Q6NSZ9 544 aa14.39□□□□□ -0.11
CCHCR1-215ENST00000488920 POTEEQ6S8J3 1075 aa14.39□□□□□ -0.11
CCHCR1-215ENST00000488920 PXYLP1Q8TE99 480 aa14.39□□□□□ -0.11
CCHCR1-215ENST00000488920 YTHDC1Q96MU7 727 aaKnown RBP14.39□□□□□ -0.11
CCHCR1-215ENST00000488920 KIAA1683Q9H0B3 1180 aa14.39□□□□□ -0.11
CCHCR1-215ENST00000488920 ATP8A2Q9NTI2 1148 aa14.39□□□□□ -0.11
CCHCR1-215ENST00000488920 GJD2Q9UKL4 321 aa14.39□□□□□ -0.11
CCHCR1-215ENST00000488920 PDE4DIPQ5VU43 2346 aa14.39□□□□□ -0.11
CCHCR1-215ENST00000488920 CDK5RAP2Q96SN8 1893 aa14.39□□□□□ -0.11
CCHCR1-215ENST00000488920 FOCADQ5VW36 1801 aa14.38□□□□□ -0.11
CCHCR1-215ENST00000488920 USP17L15C9J2P7 530 aa14.38□□□□□ -0.11
CCHCR1-215ENST00000488920 USP17L13C9JLJ4 530 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms