RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 DDTLA6NHG4 134 aaPredicted RBP12.79□□□□□ -0.36
COL21A1-211ENST00000488912 ZBTB43O43298 467 aa12.79□□□□□ -0.36
COL21A1-211ENST00000488912 NUCB2P80303 420 aa12.79□□□□□ -0.36
COL21A1-211ENST00000488912 SH3BP5LQ7L8J4 393 aa12.79□□□□□ -0.36
COL21A1-211ENST00000488912 NSUN7Q8NE18 718 aaKnown RBP12.79□□□□□ -0.36
COL21A1-211ENST00000488912 ZNF70Q9UC06 446 aaPredicted RBP12.79□□□□□ -0.36
COL21A1-211ENST00000488912 SERPINB13Q9UIV8 391 aa12.79□□□□□ -0.36
COL21A1-211ENST00000488912 ZDHHC9Q9Y397 364 aa12.79□□□□□ -0.36
COL21A1-211ENST00000488912 EGFRP00533 1210 aa12.79□□□□□ -0.36
COL21A1-211ENST00000488912 HLA-DOAP06340 250 aa12.79□□□□□ -0.36
COL21A1-211ENST00000488912 TSPY3P0CV98 308 aa12.79□□□□□ -0.36
COL21A1-211ENST00000488912 TSPY8P0CW00 308 aa12.79□□□□□ -0.36
COL21A1-211ENST00000488912 NT5C2P49902 561 aa12.79□□□□□ -0.36
COL21A1-211ENST00000488912 METAP2P50579 478 aaKnown RBP eCLIP12.79□□□□□ -0.36
COL21A1-211ENST00000488912 ZNF280AP59817 542 aaPredicted RBP12.79□□□□□ -0.36
COL21A1-211ENST00000488912 SPDYE2Q495Y8 402 aa12.79□□□□□ -0.36
COL21A1-211ENST00000488912 IFIT1BQ5T764 474 aaKnown RBP12.79□□□□□ -0.36
COL21A1-211ENST00000488912 CCDC144CPQ8IYA2 1237 aa12.79□□□□□ -0.36
COL21A1-211ENST00000488912 ZNF444Q8N0Y2 327 aaPredicted RBP12.79□□□□□ -0.36
COL21A1-211ENST00000488912 TMTC2Q8N394 836 aa12.79□□□□□ -0.36
COL21A1-211ENST00000488912 TNPO1Q92973 898 aaKnown RBP12.79□□□□□ -0.36
COL21A1-211ENST00000488912 ZBED3Q96IU2 234 aaPredicted RBP12.79□□□□□ -0.36
COL21A1-211ENST00000488912 LLPHQ9BRT6 129 aaKnown RBP12.79□□□□□ -0.36
COL21A1-211ENST00000488912 IL17RBQ9NRM6 502 aa12.79□□□□□ -0.36
COL21A1-211ENST00000488912 TMOD2Q9NZR1 351 aa12.79□□□□□ -0.36
COL21A1-211ENST00000488912 ATRNL1Q5VV63 1379 aa12.78□□□□□ -0.36
COL21A1-211ENST00000488912 PTPDC1A2A3K4 754 aa12.78□□□□□ -0.36
COL21A1-211ENST00000488912 TCP10L2B9ZVM9 353 aa12.78□□□□□ -0.36
COL21A1-211ENST00000488912 WNT10BO00744 389 aa12.78□□□□□ -0.36
COL21A1-211ENST00000488912 PPFIA3O75145 1194 aa12.78□□□□□ -0.36
COL21A1-211ENST00000488912 ENTPD3O75355 529 aa12.78□□□□□ -0.36
COL21A1-211ENST00000488912 SLURP2P0DP57 97 aa12.78□□□□□ -0.36
COL21A1-211ENST00000488912 NBPF9Q3BBW0 867 aa12.78□□□□□ -0.36
COL21A1-211ENST00000488912 ZSCAN29Q8IWY8 852 aaPredicted RBP12.78□□□□□ -0.36
COL21A1-211ENST00000488912 MICALL2Q8IY33 904 aa12.78□□□□□ -0.36
COL21A1-211ENST00000488912 ZNF654Q8IZM8 581 aa12.78□□□□□ -0.36
COL21A1-211ENST00000488912 SMARCC2Q8TAQ2 1214 aa12.78□□□□□ -0.36
COL21A1-211ENST00000488912 DDX11Q96FC9 970 aa12.78□□□□□ -0.36
COL21A1-211ENST00000488912 DHX36Q9H2U1 1008 aaKnown RBP12.78□□□□□ -0.36
COL21A1-211ENST00000488912 COL2A1P02458 1487 aaPredicted RBP12.78□□□□□ -0.36
COL21A1-211ENST00000488912 SYT1P21579 422 aa12.78□□□□□ -0.36
COL21A1-211ENST00000488912 RCSD1Q6JBY9 416 aa12.78□□□□□ -0.36
COL21A1-211ENST00000488912 DPF2Q92785 391 aa12.78□□□□□ -0.36
COL21A1-211ENST00000488912 EHD4Q9H223 541 aa12.78□□□□□ -0.36
COL21A1-211ENST00000488912 DNAJC18Q9H819 358 aa12.78□□□□□ -0.36
COL21A1-211ENST00000488912 GREB1LQ9C091 1923 aaPredicted RBP12.77□□□□□ -0.36
COL21A1-211ENST00000488912 NID2Q14112 1375 aa12.77□□□□□ -0.36
COL21A1-211ENST00000488912 GOLGA8AA7E2F4 631 aa12.77□□□□□ -0.36
COL21A1-211ENST00000488912 BRD1O95696 1058 aa12.77□□□□□ -0.36
COL21A1-211ENST00000488912 CDC27P30260 824 aa12.77□□□□□ -0.36
COL21A1-211ENST00000488912 SHMT1P34896 483 aa12.77□□□□□ -0.36
COL21A1-211ENST00000488912 SYNE3Q6ZMZ3 975 aa12.77□□□□□ -0.36
COL21A1-211ENST00000488912 ZMYND15Q9H091 742 aa12.77□□□□□ -0.36
COL21A1-211ENST00000488912 VEZTQ9HBM0 779 aa12.77□□□□□ -0.36
COL21A1-211ENST00000488912 SWAP70Q9UH65 585 aa12.77□□□□□ -0.36
COL21A1-211ENST00000488912 CNTNAP1P78357 1384 aa12.77□□□□□ -0.37
COL21A1-211ENST00000488912 FAM196BA6NMK8 535 aa12.77□□□□□ -0.37
COL21A1-211ENST00000488912 MYO1BO43795 1136 aa12.77□□□□□ -0.37
COL21A1-211ENST00000488912 DHX16O60231 1041 aaKnown RBP12.77□□□□□ -0.37
COL21A1-211ENST00000488912 ADD1P35611 737 aaKnown RBP12.77□□□□□ -0.37
COL21A1-211ENST00000488912 RBM26Q5T8P6 1007 aaKnown RBP12.77□□□□□ -0.37
COL21A1-211ENST00000488912 FOXD4L5Q5VV16 416 aaPredicted RBP12.77□□□□□ -0.37
COL21A1-211ENST00000488912 FOXD4L4Q8WXT5 416 aaPredicted RBP12.77□□□□□ -0.37
COL21A1-211ENST00000488912 FAM217BQ9NTX9 383 aaPredicted RBP12.77□□□□□ -0.37
COL21A1-211ENST00000488912 PI4KBQ9UBF8 816 aa12.77□□□□□ -0.37
COL21A1-211ENST00000488912 CNOT7Q9UIV1 285 aaKnown RBP12.77□□□□□ -0.37
COL21A1-211ENST00000488912 CPLX1O14810 134 aa12.76□□□□□ -0.37
COL21A1-211ENST00000488912 STX6O43752 255 aa12.76□□□□□ -0.37
COL21A1-211ENST00000488912 MMP14P50281 582 aa12.76□□□□□ -0.37
COL21A1-211ENST00000488912 SAMD7Q7Z3H4 446 aa12.76□□□□□ -0.37
COL21A1-211ENST00000488912 CRACR2BQ8N4Y2 399 aaPredicted RBP12.76□□□□□ -0.37
COL21A1-211ENST00000488912 NEDD1Q8NHV4 660 aa12.76□□□□□ -0.37
COL21A1-211ENST00000488912 NUP133Q8WUM0 1156 aa12.76□□□□□ -0.37
COL21A1-211ENST00000488912 CHMP4CQ96CF2 233 aa12.76□□□□□ -0.37
COL21A1-211ENST00000488912 TCP11L1Q9NUJ3 509 aa12.76□□□□□ -0.37
COL21A1-211ENST00000488912 RNF181Q9P0P0 153 aa12.76□□□□□ -0.37
COL21A1-211ENST00000488912 PLIN4Q96Q06 1357 aa12.76□□□□□ -0.37
COL21A1-211ENST00000488912 MYH6P13533 1939 aa12.76□□□□□ -0.37
COL21A1-211ENST00000488912 AKR1B1P15121 316 aa12.76□□□□□ -0.37
COL21A1-211ENST00000488912 RCAN1P53805 252 aa12.76□□□□□ -0.37
COL21A1-211ENST00000488912 HMGN5P82970 282 aaKnown RBP12.76□□□□□ -0.37
COL21A1-211ENST00000488912 CATIPQ7Z7H3 387 aa12.76□□□□□ -0.37
COL21A1-211ENST00000488912 GPC2Q8N158 579 aa12.76□□□□□ -0.37
COL21A1-211ENST00000488912 CSRNP1Q96S65 589 aa12.76□□□□□ -0.37
COL21A1-211ENST00000488912 TROAPQ12815 778 aa12.75□□□□□ -0.37
COL21A1-211ENST00000488912 RTN1Q16799 776 aa12.75□□□□□ -0.37
COL21A1-211ENST00000488912 TBC1D10BQ4KMP7 808 aaPredicted RBP12.75□□□□□ -0.37
COL21A1-211ENST00000488912 FKBP1CQ5VVH2 108 aa12.75□□□□□ -0.37
COL21A1-211ENST00000488912 LARP1BQ659C4 914 aaKnown RBP12.75□□□□□ -0.37
COL21A1-211ENST00000488912 DGKHQ86XP1 1220 aa12.75□□□□□ -0.37
COL21A1-211ENST00000488912 FAM151AQ8WW52 585 aa12.75□□□□□ -0.37
COL21A1-211ENST00000488912 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.75□□□□□ -0.37
COL21A1-211ENST00000488912 WDR33Q9C0J8 1336 aaKnown RBP12.75□□□□□ -0.37
COL21A1-211ENST00000488912 MYH4Q9Y623 1939 aa12.75□□□□□ -0.37
COL21A1-211ENST00000488912 FDPSP14324 419 aaKnown RBP12.74□□□□□ -0.37
COL21A1-211ENST00000488912 PDCP20941 246 aa12.74□□□□□ -0.37
COL21A1-211ENST00000488912 NTRK3Q16288 839 aa12.74□□□□□ -0.37
COL21A1-211ENST00000488912 FAM184AQ8NB25 1140 aa12.74□□□□□ -0.37
COL21A1-211ENST00000488912 FANCBQ8NB91 859 aa12.74□□□□□ -0.37
COL21A1-211ENST00000488912 CEP95Q96GE4 821 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms