RNA–Protein interactions for RNA: ENST00000488590.1

SUPT20H-218, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 4

Gene SUPT20H, Length 572 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-218ENST00000488590 DDX4Q9NQI0 724 aaKnown RBP11.73□□□□□ -0.53
SUPT20H-218ENST00000488590 IFT57Q9NWB7 429 aa11.73□□□□□ -0.53
SUPT20H-218ENST00000488590 FRAT2O75474 233 aaPredicted RBP11.72□□□□□ -0.53
SUPT20H-218ENST00000488590 HOXC6P09630 235 aa11.72□□□□□ -0.53
SUPT20H-218ENST00000488590 CNGA1P29973 690 aa11.72□□□□□ -0.53
SUPT20H-218ENST00000488590 PRDX5P30044 214 aa11.72□□□□□ -0.53
SUPT20H-218ENST00000488590 ERVK-9P63128 1117 aa11.72□□□□□ -0.53
SUPT20H-218ENST00000488590 ERVK-24P63145 666 aa11.72□□□□□ -0.53
SUPT20H-218ENST00000488590 FOXK2Q01167 660 aa11.72□□□□□ -0.53
SUPT20H-218ENST00000488590 MFSD14CQ5VZR4 134 aa11.72□□□□□ -0.53
SUPT20H-218ENST00000488590 VPS37DQ86XT2 251 aa11.72□□□□□ -0.53
SUPT20H-218ENST00000488590 ARRDC4Q8NCT1 418 aa11.72□□□□□ -0.53
SUPT20H-218ENST00000488590 FERMT2Q96AC1 680 aa11.72□□□□□ -0.53
SUPT20H-218ENST00000488590 PRRC2BQ5JSZ5 2229 aaKnown RBP11.72□□□□□ -0.53
SUPT20H-218ENST00000488590 LRRC37A2A6NM11 1700 aa11.72□□□□□ -0.53
SUPT20H-218ENST00000488590 SPTBN4Q9H254 2564 aa11.72□□□□□ -0.53
SUPT20H-218ENST00000488590 FAM196BA6NMK8 535 aa11.71□□□□□ -0.53
SUPT20H-218ENST00000488590 TBC1D12O60347 775 aa11.71□□□□□ -0.53
SUPT20H-218ENST00000488590 RAG1P15918 1043 aa11.71□□□□□ -0.53
SUPT20H-218ENST00000488590 TRIM26Q12899 539 aaPredicted RBP11.71□□□□□ -0.53
SUPT20H-218ENST00000488590 CAVIN4Q5BKX8 364 aa11.71□□□□□ -0.53
SUPT20H-218ENST00000488590 TMEM240Q5SV17 173 aa11.71□□□□□ -0.53
SUPT20H-218ENST00000488590 ANO1Q5XXA6 986 aa11.71□□□□□ -0.53
SUPT20H-218ENST00000488590 NPLOC4Q8TAT6 608 aa11.71□□□□□ -0.53
SUPT20H-218ENST00000488590 FBXL18Q96ME1 805 aa11.71□□□□□ -0.53
SUPT20H-218ENST00000488590 TSPYL2Q9H2G4 693 aaPredicted RBP11.71□□□□□ -0.53
SUPT20H-218ENST00000488590 MROH5Q6ZUA9 1318 aa11.7□□□□□ -0.54
SUPT20H-218ENST00000488590 KBTBD13C9JR72 458 aa11.7□□□□□ -0.54
SUPT20H-218ENST00000488590 CNMDO75829 334 aa11.7□□□□□ -0.54
SUPT20H-218ENST00000488590 IRX3P78415 501 aaPredicted RBP11.7□□□□□ -0.54
SUPT20H-218ENST00000488590 FAAP100Q0VG06 881 aa11.7□□□□□ -0.54
SUPT20H-218ENST00000488590 LRRC41Q15345 812 aa11.7□□□□□ -0.54
SUPT20H-218ENST00000488590 TAF7LQ5H9L4 462 aa11.7□□□□□ -0.54
SUPT20H-218ENST00000488590 DNAAF4Q8WXU2 420 aa11.7□□□□□ -0.54
SUPT20H-218ENST00000488590 HERVK_113Q902F9 699 aa11.7□□□□□ -0.54
SUPT20H-218ENST00000488590 RUNDC1Q96C34 613 aa11.7□□□□□ -0.54
SUPT20H-218ENST00000488590 YBX2Q9Y2T7 364 aaKnown RBP11.7□□□□□ -0.54
SUPT20H-218ENST00000488590 NDUFB9Q9Y6M9 179 aa11.7□□□□□ -0.54
SUPT20H-218ENST00000488590 C5orf42Q9H799 3197 aa11.69□□□□□ -0.54
SUPT20H-218ENST00000488590 MYBBP1AQ9BQG0 1328 aaKnown RBP11.69□□□□□ -0.54
SUPT20H-218ENST00000488590 ZNF318Q5VUA4 2279 aa11.69□□□□□ -0.54
SUPT20H-218ENST00000488590 FGFR2P21802 821 aa11.69□□□□□ -0.54
SUPT20H-218ENST00000488590 PTPREP23469 700 aa11.69□□□□□ -0.54
SUPT20H-218ENST00000488590 CCDC129Q6ZRS4 1044 aa11.69□□□□□ -0.54
SUPT20H-218ENST00000488590 WDR66Q8TBY9 1149 aa11.69□□□□□ -0.54
SUPT20H-218ENST00000488590 KAZALD1Q96I82 304 aa11.69□□□□□ -0.54
SUPT20H-218ENST00000488590 PHOX2BQ99453 314 aa11.69□□□□□ -0.54
SUPT20H-218ENST00000488590 TBC1D2Q9BYX2 928 aa11.69□□□□□ -0.54
SUPT20H-218ENST00000488590 OSBPL5Q9H0X9 879 aaPredicted RBP11.69□□□□□ -0.54
SUPT20H-218ENST00000488590 NKX2-4Q9H2Z4 354 aa11.69□□□□□ -0.54
SUPT20H-218ENST00000488590 PHF24Q9UPV7 400 aa11.69□□□□□ -0.54
SUPT20H-218ENST00000488590 GAKO14976 1311 aa11.68□□□□□ -0.54
SUPT20H-218ENST00000488590 KIF16BQ96L93 1317 aa11.68□□□□□ -0.54
SUPT20H-218ENST00000488590 USP17L5A8MUK1 530 aa11.68□□□□□ -0.54
SUPT20H-218ENST00000488590 PDE8BO95263 885 aa11.68□□□□□ -0.54
SUPT20H-218ENST00000488590 SLC4A2P04920 1241 aa11.68□□□□□ -0.54
SUPT20H-218ENST00000488590 POU3F3P20264 500 aaPredicted RBP11.68□□□□□ -0.54
SUPT20H-218ENST00000488590 CAP2P40123 477 aa11.68□□□□□ -0.54
SUPT20H-218ENST00000488590 BACE1P56817 501 aa11.68□□□□□ -0.54
SUPT20H-218ENST00000488590 GNAI1P63096 354 aa11.68□□□□□ -0.54
SUPT20H-218ENST00000488590 JAG1P78504 1218 aa11.68□□□□□ -0.54
SUPT20H-218ENST00000488590 FLIIQ13045 1269 aa11.68□□□□□ -0.54
SUPT20H-218ENST00000488590 MTMR2Q13614 643 aa11.68□□□□□ -0.54
SUPT20H-218ENST00000488590 LRRC24Q50LG9 513 aa11.68□□□□□ -0.54
SUPT20H-218ENST00000488590 ZSCAN29Q8IWY8 852 aaPredicted RBP11.68□□□□□ -0.54
SUPT20H-218ENST00000488590 WDR18Q9BV38 432 aa11.68□□□□□ -0.54
SUPT20H-218ENST00000488590 SLC15A5A6NIM6 579 aa11.67□□□□□ -0.54
SUPT20H-218ENST00000488590 SEPT4O43236 478 aa11.67□□□□□ -0.54
SUPT20H-218ENST00000488590 PQBP1O60828 265 aaKnown RBP11.67□□□□□ -0.54
SUPT20H-218ENST00000488590 TIMP1P01033 207 aa11.67□□□□□ -0.54
SUPT20H-218ENST00000488590 ATP2B2Q01814 1243 aa11.67□□□□□ -0.54
SUPT20H-218ENST00000488590 GRB14Q14449 540 aa11.67□□□□□ -0.54
SUPT20H-218ENST00000488590 BEND3Q5T5X7 828 aa11.67□□□□□ -0.54
SUPT20H-218ENST00000488590 ANKRD33Q7Z3H0 272 aa11.67□□□□□ -0.54
SUPT20H-218ENST00000488590 MICALL1Q8N3F8 863 aa11.67□□□□□ -0.54
SUPT20H-218ENST00000488590 PAGR1Q9BTK6 254 aa11.67□□□□□ -0.54
SUPT20H-218ENST00000488590 CHMP4AQ9BY43 222 aa11.67□□□□□ -0.54
SUPT20H-218ENST00000488590 KCNH6Q9H252 994 aa11.67□□□□□ -0.54
SUPT20H-218ENST00000488590 TMEM39AQ9NV64 488 aa11.67□□□□□ -0.54
SUPT20H-218ENST00000488590 TBX21Q9UL17 535 aa11.67□□□□□ -0.54
SUPT20H-218ENST00000488590 MTCH2Q9Y6C9 303 aa11.67□□□□□ -0.54
SUPT20H-218ENST00000488590 BRWD1Q9NSI6 2320 aa11.67□□□□□ -0.54
SUPT20H-218ENST00000488590 DCHS1Q96JQ0 3298 aa11.67□□□□□ -0.54
SUPT20H-218ENST00000488590 ATAD5Q96QE3 1844 aa11.66□□□□□ -0.54
SUPT20H-218ENST00000488590 RAB30Q15771 203 aa11.66□□□□□ -0.54
SUPT20H-218ENST00000488590 FAM47AQ5JRC9 791 aa11.66□□□□□ -0.54
SUPT20H-218ENST00000488590 MFSD5Q6N075 450 aa11.66□□□□□ -0.54
SUPT20H-218ENST00000488590 SLC44A5Q8NCS7 719 aa11.66□□□□□ -0.54
SUPT20H-218ENST00000488590 SLC28A3Q9HAS3 691 aa11.66□□□□□ -0.54
SUPT20H-218ENST00000488590 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.66□□□□□ -0.54
SUPT20H-218ENST00000488590 COG5Q9UP83 839 aa11.66□□□□□ -0.54
SUPT20H-218ENST00000488590 TRIOO75962 3097 aa11.66□□□□□ -0.54
SUPT20H-218ENST00000488590 GBF1Q92538 1859 aa11.66□□□□□ -0.54
SUPT20H-218ENST00000488590 GRM8O00222 908 aa11.65□□□□□ -0.54
SUPT20H-218ENST00000488590 MYCNP04198 464 aaPredicted RBP11.65□□□□□ -0.54
SUPT20H-218ENST00000488590 ZNF365Q70YC5 407 aa11.65□□□□□ -0.54
SUPT20H-218ENST00000488590 ANKS1AQ92625 1134 aa11.65□□□□□ -0.54
SUPT20H-218ENST00000488590 TOX2Q96NM4 488 aa11.65□□□□□ -0.54
SUPT20H-218ENST00000488590 STK31Q9BXU1 1019 aa11.65□□□□□ -0.54
SUPT20H-218ENST00000488590 MSRAQ9UJ68 235 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms