RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 DDX4Q9NQI0 724 aaKnown RBP23.56■■□□□ 1.36
NECAB3-213ENST00000488489 TFIP11Q9UBB9 837 aaKnown RBP23.56■■□□□ 1.36
NECAB3-213ENST00000488489 PCDHAC2Q9Y5I4 1007 aa23.56■■□□□ 1.36
NECAB3-213ENST00000488489 IFNAR1P17181 557 aa23.55■■□□□ 1.36
NECAB3-213ENST00000488489 IARSP41252 1262 aaKnown RBP23.55■■□□□ 1.36
NECAB3-213ENST00000488489 CRKP46108 304 aa23.55■■□□□ 1.36
NECAB3-213ENST00000488489 KRT85P78386 507 aa23.55■■□□□ 1.36
NECAB3-213ENST00000488489 PICALMQ13492 652 aa23.55■■□□□ 1.36
NECAB3-213ENST00000488489 RCSD1Q6JBY9 416 aa23.55■■□□□ 1.36
NECAB3-213ENST00000488489 RTKN2Q8IZC4 609 aa23.55■■□□□ 1.36
NECAB3-213ENST00000488489 CMTR1Q8N1G2 835 aaKnown RBP23.55■■□□□ 1.36
NECAB3-213ENST00000488489 MKNK2Q9HBH9 465 aa23.55■■□□□ 1.36
NECAB3-213ENST00000488489 IL17RBQ9NRM6 502 aa23.55■■□□□ 1.36
NECAB3-213ENST00000488489 USP40Q9NVE5 1235 aa23.55■■□□□ 1.36
NECAB3-213ENST00000488489 RBM27Q9P2N5 1060 aaKnown RBP23.55■■□□□ 1.36
NECAB3-213ENST00000488489 TROAPQ12815 778 aa23.54■■□□□ 1.36
NECAB3-213ENST00000488489 CDC42EP5Q6NZY7 148 aa23.54■■□□□ 1.36
NECAB3-213ENST00000488489 PSMD1Q99460 953 aa23.54■■□□□ 1.36
NECAB3-213ENST00000488489 ESPNB1AK53 854 aa23.54■■□□□ 1.36
NECAB3-213ENST00000488489 GRIPAP1Q4V328 841 aa23.54■■□□□ 1.36
NECAB3-213ENST00000488489 TTC6Q86TZ1 520 aa23.54■■□□□ 1.36
NECAB3-213ENST00000488489 MBD3O95983 291 aa23.53■■□□□ 1.36
NECAB3-213ENST00000488489 RASA1P20936 1047 aa23.53■■□□□ 1.36
NECAB3-213ENST00000488489 C16orf86Q6ZW13 317 aa23.53■■□□□ 1.36
NECAB3-213ENST00000488489 NBPF11Q86T75 865 aa23.53■■□□□ 1.36
NECAB3-213ENST00000488489 CCDC82Q8N4S0 544 aa23.53■■□□□ 1.36
NECAB3-213ENST00000488489 ALG1Q9BT22 464 aa23.53■■□□□ 1.36
NECAB3-213ENST00000488489 SLC26A6Q9BXS9 759 aa23.53■■□□□ 1.36
NECAB3-213ENST00000488489 CDK8P49336 464 aa23.53■■□□□ 1.36
NECAB3-213ENST00000488489 TGFB2P61812 414 aa23.53■■□□□ 1.36
NECAB3-213ENST00000488489 CATIPQ7Z7H3 387 aa23.53■■□□□ 1.36
NECAB3-213ENST00000488489 ZDHHC15Q96MV8 337 aa23.53■■□□□ 1.36
NECAB3-213ENST00000488489 ZNF277Q9NRM2 450 aaPredicted RBP23.53■■□□□ 1.36
NECAB3-213ENST00000488489 ECM29Q5VYK3 1845 aa23.52■■□□□ 1.36
NECAB3-213ENST00000488489 FMNL1O95466 1100 aaPredicted RBP23.52■■□□□ 1.36
NECAB3-213ENST00000488489 POLD1P28340 1107 aa23.52■■□□□ 1.36
NECAB3-213ENST00000488489 TRIM44Q96DX7 344 aaPredicted RBP23.52■■□□□ 1.36
NECAB3-213ENST00000488489 MRIQ9BWK5 157 aa23.52■■□□□ 1.36
NECAB3-213ENST00000488489 TMEM63CQ9P1W3 806 aa23.52■■□□□ 1.36
NECAB3-213ENST00000488489 COL4A5P29400 1685 aa23.52■■□□□ 1.36
NECAB3-213ENST00000488489 CCDC196A0A1B0GTZ2 297 aa23.51■■□□□ 1.35
NECAB3-213ENST00000488489 GUCY1A2P33402 732 aa23.51■■□□□ 1.35
NECAB3-213ENST00000488489 SSRP1Q08945 709 aaKnown RBP23.51■■□□□ 1.35
NECAB3-213ENST00000488489 TPRNQ4KMQ1 711 aa23.51■■□□□ 1.35
NECAB3-213ENST00000488489 ZNF444Q8N0Y2 327 aaPredicted RBP23.51■■□□□ 1.35
NECAB3-213ENST00000488489 CRACR2BQ8N4Y2 399 aaPredicted RBP23.51■■□□□ 1.35
NECAB3-213ENST00000488489 PIM2Q9P1W9 311 aa23.51■■□□□ 1.35
NECAB3-213ENST00000488489 UBE2HP62256 183 aa23.51■■□□□ 1.35
NECAB3-213ENST00000488489 STK36Q9NRP7 1315 aa23.5■■□□□ 1.35
NECAB3-213ENST00000488489 NFIAQ12857 509 aa23.5■■□□□ 1.35
NECAB3-213ENST00000488489 TSPY3P0CV98 308 aa23.5■■□□□ 1.35
NECAB3-213ENST00000488489 TSPY8P0CW00 308 aa23.5■■□□□ 1.35
NECAB3-213ENST00000488489 NT5C2P49902 561 aa23.5■■□□□ 1.35
NECAB3-213ENST00000488489 SCAND2PQ9GZW5 306 aaPredicted RBP23.5■■□□□ 1.35
NECAB3-213ENST00000488489 TAOK2Q9UL54 1235 aa23.5■■□□□ 1.35
NECAB3-213ENST00000488489 MYH15Q9Y2K3 1946 aa23.49■■□□□ 1.35
NECAB3-213ENST00000488489 HDLBPQ00341 1268 aaKnown RBP23.49■■□□□ 1.35
NECAB3-213ENST00000488489 CCDC173Q0VFZ6 552 aa23.49■■□□□ 1.35
NECAB3-213ENST00000488489 FUT2Q10981 343 aa23.49■■□□□ 1.35
NECAB3-213ENST00000488489 PPP2R5BQ15173 497 aa23.49■■□□□ 1.35
NECAB3-213ENST00000488489 CSPP1Q1MSJ5 1256 aa23.49■■□□□ 1.35
NECAB3-213ENST00000488489 ZSCAN23Q3MJ62 389 aa23.49■■□□□ 1.35
NECAB3-213ENST00000488489 LEO1Q8WVC0 666 aaPredicted RBP23.49■■□□□ 1.35
NECAB3-213ENST00000488489 FTOQ9C0B1 505 aaKnown RBP eCLIP23.49■■□□□ 1.35
NECAB3-213ENST00000488489 ELP1O95163 1332 aa23.49■■□□□ 1.35
NECAB3-213ENST00000488489 KIF28PB7ZC32 967 aa23.48■■□□□ 1.35
NECAB3-213ENST00000488489 DDAH1O94760 285 aa23.48■■□□□ 1.35
NECAB3-213ENST00000488489 KRT40Q6A162 431 aa23.48■■□□□ 1.35
NECAB3-213ENST00000488489 DGKHQ86XP1 1220 aa23.48■■□□□ 1.35
NECAB3-213ENST00000488489 LARGE2Q8N3Y3 721 aa23.48■■□□□ 1.35
NECAB3-213ENST00000488489 UPF1Q92900 1129 aaKnown RBP eCLIP23.48■■□□□ 1.352e-9■■■■■ 29.1
NECAB3-213ENST00000488489 SGIP1Q9BQI5 828 aa23.48■■□□□ 1.35
NECAB3-213ENST00000488489 ZNF287Q9HBT7 754 aa23.48■■□□□ 1.35
NECAB3-213ENST00000488489 TCP11L1Q9NUJ3 509 aa23.48■■□□□ 1.35
NECAB3-213ENST00000488489 PPP1R1BQ9UD71 204 aaPredicted RBP23.48■■□□□ 1.35
NECAB3-213ENST00000488489 PLEKHA8P1O95397 391 aa23.48■■□□□ 1.35
NECAB3-213ENST00000488489 CACNB3P54284 484 aa23.48■■□□□ 1.35
NECAB3-213ENST00000488489 ZNF445P59923 1031 aa23.48■■□□□ 1.35
NECAB3-213ENST00000488489 ANKS1AQ92625 1134 aa23.48■■□□□ 1.35
NECAB3-213ENST00000488489 SPATA32Q96LK8 384 aa23.48■■□□□ 1.35
NECAB3-213ENST00000488489 PPP1R9BQ96SB3 815 aa23.48■■□□□ 1.35
NECAB3-213ENST00000488489 OSBPL5Q9H0X9 879 aaPredicted RBP23.48■■□□□ 1.35
NECAB3-213ENST00000488489 CALM1P0DP23 149 aa23.47■■□□□ 1.35
NECAB3-213ENST00000488489 CALM2P0DP24 149 aa23.47■■□□□ 1.35
NECAB3-213ENST00000488489 CALM3P0DP25 149 aa23.47■■□□□ 1.35
NECAB3-213ENST00000488489 RBM5P52756 815 aaKnown RBP eCLIP23.47■■□□□ 1.359e-7■■■□□ 15.3
NECAB3-213ENST00000488489 KIF23Q02241 960 aaPredicted RBP23.47■■□□□ 1.35
NECAB3-213ENST00000488489 GABPAQ06546 454 aa23.47■■□□□ 1.35
NECAB3-213ENST00000488489 ZFPM1Q8IX07 1006 aa23.47■■□□□ 1.35
NECAB3-213ENST00000488489 RGS22Q8NE09 1264 aa23.47■■□□□ 1.35
NECAB3-213ENST00000488489 SERPINA10Q9UK55 444 aa23.47■■□□□ 1.35
NECAB3-213ENST00000488489 NASPP49321 788 aaPredicted RBP23.47■■□□□ 1.35
NECAB3-213ENST00000488489 CEBPZQ03701 1054 aaKnown RBP23.47■■□□□ 1.35
NECAB3-213ENST00000488489 TRIM22Q8IYM9 498 aa23.47■■□□□ 1.35
NECAB3-213ENST00000488489 PSME4Q14997 1843 aa23.47■■□□□ 1.35
NECAB3-213ENST00000488489 RAD17O75943 681 aa23.46■■□□□ 1.35
NECAB3-213ENST00000488489 USP28Q96RU2 1077 aa23.46■■□□□ 1.35
NECAB3-213ENST00000488489 BAZ2BQ9UIF8 2168 aaKnown RBP23.46■■□□□ 1.35
NECAB3-213ENST00000488489 PSDA5PKW4 1024 aaPredicted RBP23.45■■□□□ 1.35
NECAB3-213ENST00000488489 PRKCSHP14314 528 aaPredicted RBP23.45■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms