RNA–Protein interactions for RNA: ENST00000488321.1

TRIM54-204, Transcript of tripartite motif containing 54, humanhuman

TSL 2

Gene TRIM54, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-204ENST00000488321 PARK7Q99497 189 aaKnown RBP18.01■□□□□ 0.47
TRIM54-204ENST00000488321 CCDC85CA6NKD9 419 aa18■□□□□ 0.47
TRIM54-204ENST00000488321 CYP2C8P10632 490 aa18■□□□□ 0.47
TRIM54-204ENST00000488321 HMGCS2P54868 508 aa18■□□□□ 0.47
TRIM54-204ENST00000488321 EVX2Q03828 476 aa18■□□□□ 0.47
TRIM54-204ENST00000488321 TATDN1Q6P1N9 297 aa18■□□□□ 0.47
TRIM54-204ENST00000488321 GINM1Q9NU53 330 aa18■□□□□ 0.47
TRIM54-204ENST00000488321 STAP2Q9UGK3 403 aa18■□□□□ 0.47
TRIM54-204ENST00000488321 CPA4Q9UI42 421 aa18■□□□□ 0.47
TRIM54-204ENST00000488321 TRIM17Q9Y577 477 aa18■□□□□ 0.47
TRIM54-204ENST00000488321 SHMT1P34896 483 aa17.99■□□□□ 0.47
TRIM54-204ENST00000488321 NUCB1Q02818 461 aa17.99■□□□□ 0.47
TRIM54-204ENST00000488321 MTMR2Q13614 643 aa17.99■□□□□ 0.47
TRIM54-204ENST00000488321 RAB3GAP1Q15042 981 aa17.99■□□□□ 0.47
TRIM54-204ENST00000488321 PKN2Q16513 984 aaKnown RBP17.99■□□□□ 0.47
TRIM54-204ENST00000488321 ABCB5Q2M3G0 1257 aa17.99■□□□□ 0.47
TRIM54-204ENST00000488321 STRBPQ96SI9 672 aaKnown RBP17.99■□□□□ 0.47
TRIM54-204ENST00000488321 WDR18Q9BV38 432 aa17.99■□□□□ 0.47
TRIM54-204ENST00000488321 CABP5Q9NP86 173 aa17.99■□□□□ 0.47
TRIM54-204ENST00000488321 CYP2D7A0A087X1C5 515 aa17.98■□□□□ 0.47
TRIM54-204ENST00000488321 USP17L12C9JPN9 530 aa17.98■□□□□ 0.47
TRIM54-204ENST00000488321 USP17L21D6R901 530 aa17.98■□□□□ 0.47
TRIM54-204ENST00000488321 M0R2C6 588 aa17.98■□□□□ 0.47
TRIM54-204ENST00000488321 MPHOSPH10O00566 681 aaKnown RBP17.98■□□□□ 0.47
TRIM54-204ENST00000488321 GPAA1O43292 621 aa17.98■□□□□ 0.47
TRIM54-204ENST00000488321 ECM2O94769 699 aaPredicted RBP17.98■□□□□ 0.47
TRIM54-204ENST00000488321 TREML2Q5T2D2 321 aa17.98■□□□□ 0.47
TRIM54-204ENST00000488321 EVI5LQ96CN4 794 aa17.98■□□□□ 0.47
TRIM54-204ENST00000488321 DYNLL2Q96FJ2 89 aa17.98■□□□□ 0.47
TRIM54-204ENST00000488321 EFCC1Q9HA90 598 aa17.98■□□□□ 0.47
TRIM54-204ENST00000488321 TMOD4Q9NZQ9 345 aa17.98■□□□□ 0.47
TRIM54-204ENST00000488321 AGTPBP1Q9UPW5 1226 aa17.98■□□□□ 0.47
TRIM54-204ENST00000488321 CASP8AP2Q9UKL3 1982 aa17.97■□□□□ 0.47
TRIM54-204ENST00000488321 APPP05067 770 aa17.97■□□□□ 0.47
TRIM54-204ENST00000488321 BACE1P56817 501 aa17.97■□□□□ 0.47
TRIM54-204ENST00000488321 GABPAQ06546 454 aa17.97■□□□□ 0.47
TRIM54-204ENST00000488321 KIF22Q14807 665 aa17.97■□□□□ 0.47
TRIM54-204ENST00000488321 ARHGEF6Q15052 776 aa17.97■□□□□ 0.47
TRIM54-204ENST00000488321 C12orf60Q5U649 245 aa17.97■□□□□ 0.47
TRIM54-204ENST00000488321 OTOP1Q7RTM1 612 aa17.97■□□□□ 0.47
TRIM54-204ENST00000488321 PROCA1Q8NCQ7 364 aaPredicted RBP17.97■□□□□ 0.47
TRIM54-204ENST00000488321 SLC44A5Q8NCS7 719 aa17.97■□□□□ 0.47
TRIM54-204ENST00000488321 SMCR8Q8TEV9 937 aaPredicted RBP17.97■□□□□ 0.47
TRIM54-204ENST00000488321 SEC62Q99442 399 aaKnown RBP17.97■□□□□ 0.47
TRIM54-204ENST00000488321 SWAP70Q9UH65 585 aa17.97■□□□□ 0.47
TRIM54-204ENST00000488321 TRIM6-TRIM34B2RNG4 842 aa17.96■□□□□ 0.47
TRIM54-204ENST00000488321 USP17L10C9JJH3 530 aa17.96■□□□□ 0.47
TRIM54-204ENST00000488321 GNAT2P19087 354 aa17.96■□□□□ 0.47
TRIM54-204ENST00000488321 CTR9Q6PD62 1173 aa17.96■□□□□ 0.47
TRIM54-204ENST00000488321 FBXO46Q6PJ61 603 aaPredicted RBP17.96■□□□□ 0.47
TRIM54-204ENST00000488321 C17orf99Q6UX52 265 aa17.96■□□□□ 0.47
TRIM54-204ENST00000488321 FEZ1Q99689 392 aa17.96■□□□□ 0.47
TRIM54-204ENST00000488321 ARPP21Q9UBL0 812 aaPredicted RBP17.96■□□□□ 0.47
TRIM54-204ENST00000488321 SLC45A1Q9Y2W3 748 aa17.96■□□□□ 0.47
TRIM54-204ENST00000488321 DOCK1Q14185 1865 aa17.96■□□□□ 0.47
TRIM54-204ENST00000488321 LAMB1P07942 1786 aa17.95■□□□□ 0.46
TRIM54-204ENST00000488321 GSG1L2A8MUP6 293 aa17.95■□□□□ 0.46
TRIM54-204ENST00000488321 TDO2P48775 406 aa17.95■□□□□ 0.46
TRIM54-204ENST00000488321 PABPC4Q13310 644 aaKnown RBP eCLIP17.95■□□□□ 0.46
TRIM54-204ENST00000488321 ZYXQ15942 572 aaKnown RBP17.95■□□□□ 0.46
TRIM54-204ENST00000488321 SH3D19Q5HYK7 790 aa17.95■□□□□ 0.46
TRIM54-204ENST00000488321 ZMYM1Q5SVZ6 1142 aa17.95■□□□□ 0.46
TRIM54-204ENST00000488321 PNMA3Q9UL41 463 aa17.95■□□□□ 0.46
TRIM54-204ENST00000488321 HPS5Q9UPZ3 1129 aa17.95■□□□□ 0.46
TRIM54-204ENST00000488321 SIPA1L1O43166 1804 aa17.95■□□□□ 0.46
TRIM54-204ENST00000488321 MINDY4BA8MYZ0 360 aa17.94■□□□□ 0.46
TRIM54-204ENST00000488321 C19orf81C9J6K1 198 aa17.94■□□□□ 0.46
TRIM54-204ENST00000488321 SMIM22K7EJ46 135 aa17.94■□□□□ 0.46
TRIM54-204ENST00000488321 OSBPP22059 807 aa17.94■□□□□ 0.46
TRIM54-204ENST00000488321 LACTBP83111 547 aaPredicted RBP17.94■□□□□ 0.46
TRIM54-204ENST00000488321 STK11IPQ8N1F8 1099 aa17.94■□□□□ 0.46
TRIM54-204ENST00000488321 RILPL2Q969X0 211 aa17.94■□□□□ 0.46
TRIM54-204ENST00000488321 ARHGAP39Q9C0H5 1083 aa17.94■□□□□ 0.46
TRIM54-204ENST00000488321 ADGRA2Q96PE1 1338 aa17.94■□□□□ 0.46
TRIM54-204ENST00000488321 FOCADQ5VW36 1801 aa17.93■□□□□ 0.46
TRIM54-204ENST00000488321 CDK8P49336 464 aa17.93■□□□□ 0.46
TRIM54-204ENST00000488321 CAP1Q01518 475 aa17.93■□□□□ 0.46
TRIM54-204ENST00000488321 SEPT2Q15019 361 aa17.93■□□□□ 0.46
TRIM54-204ENST00000488321 GIMAP6Q6P9H5 292 aa17.93■□□□□ 0.46
TRIM54-204ENST00000488321 USP17L2Q6R6M4 530 aa17.93■□□□□ 0.46
TRIM54-204ENST00000488321 PLEKHM2Q8IWE5 1019 aa17.93■□□□□ 0.46
TRIM54-204ENST00000488321 NACAP1Q9BZK3 213 aa17.93■□□□□ 0.46
TRIM54-204ENST00000488321 TAOK2Q9UL54 1235 aa17.93■□□□□ 0.46
TRIM54-204ENST00000488321 PATL2C9JE40 543 aaKnown RBP17.92■□□□□ 0.46
TRIM54-204ENST00000488321 FMNL1O95466 1100 aaPredicted RBP17.92■□□□□ 0.46
TRIM54-204ENST00000488321 GUCY1A2P33402 732 aa17.92■□□□□ 0.46
TRIM54-204ENST00000488321 IRX3P78415 501 aaPredicted RBP17.92■□□□□ 0.46
TRIM54-204ENST00000488321 CCDC129Q6ZRS4 1044 aa17.92■□□□□ 0.46
TRIM54-204ENST00000488321 TMEM179Q6ZVK1 233 aa17.92■□□□□ 0.46
TRIM54-204ENST00000488321 C16orf86Q6ZW13 317 aa17.92■□□□□ 0.46
TRIM54-204ENST00000488321 ACER1Q8TDN7 264 aa17.92■□□□□ 0.46
TRIM54-204ENST00000488321 EPB41L4AQ9HCS5 686 aaPredicted RBP17.92■□□□□ 0.46
TRIM54-204ENST00000488321 PTPN22Q9Y2R2 807 aa17.92■□□□□ 0.46
TRIM54-204ENST00000488321 NAV1Q8NEY1 1877 aa17.91■□□□□ 0.46
TRIM54-204ENST00000488321 CDK5RAP2Q96SN8 1893 aa17.91■□□□□ 0.46
TRIM54-204ENST00000488321 BCRP11274 1271 aa17.91■□□□□ 0.46
TRIM54-204ENST00000488321 AKR1B1P15121 316 aa17.91■□□□□ 0.46
TRIM54-204ENST00000488321 PSMC4P43686 418 aa17.91■□□□□ 0.46
TRIM54-204ENST00000488321 USP14P54578 494 aa17.91■□□□□ 0.46
TRIM54-204ENST00000488321 SBK1Q52WX2 424 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms