RNA–Protein interactions for RNA: ENST00000488180.1

SP100-216, Transcript of SP100 nuclear antigen, human

TSL 2

Gene SP100, Length 3,333 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SP100-216	ENST00000488180	GOLGA1	Q92805	767 aa		4.24	□□□□□ -1.73
SP100-216	ENST00000488180	CNKSR1	Q969H4	720 aa		4.24	□□□□□ -1.73
SP100-216	ENST00000488180	IL17RA	Q96F46	866 aa		4.24	□□□□□ -1.73
SP100-216	ENST00000488180	PGBD1	Q96JS3	809 aa		4.24	□□□□□ -1.73
SP100-216	ENST00000488180	JAKMIP1	Q96N16	626 aa	Known RBP	4.24	□□□□□ -1.73
SP100-216	ENST00000488180	FAM107B	Q9H098	131 aa		4.24	□□□□□ -1.73
SP100-216	ENST00000488180	BICC1	Q9H694	974 aa	Known RBP	4.24	□□□□□ -1.73
SP100-216	ENST00000488180	LGR6	Q9HBX8	967 aa		4.24	□□□□□ -1.73
SP100-216	ENST00000488180	SH2B1	Q9NRF2	756 aa	Predicted RBP	4.24	□□□□□ -1.73
SP100-216	ENST00000488180	IFNK	Q9P0W0	207 aa		4.24	□□□□□ -1.73
SP100-216	ENST00000488180	AKAP2	Q9Y2D5	859 aa		4.24	□□□□□ -1.73
SP100-216	ENST00000488180	MYO3B	Q8WXR4	1341 aa		4.24	□□□□□ -1.73
SP100-216	ENST00000488180	MAP2K7	O14733	419 aa		4.23	□□□□□ -1.73
SP100-216	ENST00000488180	CTAGE5	O15320	804 aa		4.23	□□□□□ -1.73
SP100-216	ENST00000488180	EPB41L2	O43491	1005 aa	Known RBP	4.23	□□□□□ -1.73
SP100-216	ENST00000488180	CIAO1	O76071	339 aa		4.23	□□□□□ -1.73
SP100-216	ENST00000488180	HMOX1	P09601	288 aa		4.23	□□□□□ -1.73
SP100-216	ENST00000488180	SCP2	P22307	547 aa		4.23	□□□□□ -1.73
SP100-216	ENST00000488180	TXLNA	P40222	546 aa		4.23	□□□□□ -1.73
SP100-216	ENST00000488180	MAP2K1	Q02750	393 aa	Predicted RBP	4.23	□□□□□ -1.73
SP100-216	ENST00000488180	BRD3	Q15059	726 aa		4.23	□□□□□ -1.73
SP100-216	ENST00000488180	ISM2	Q6H9L7	571 aa		4.23	□□□□□ -1.73
SP100-216	ENST00000488180	TRIM65	Q6PJ69	517 aa		4.23	□□□□□ -1.73
SP100-216	ENST00000488180	ERC1	Q8IUD2	1116 aa		4.23	□□□□□ -1.73
SP100-216	ENST00000488180	SGSM3	Q96HU1	749 aa		4.23	□□□□□ -1.73
SP100-216	ENST00000488180	JPH2	Q9BR39	696 aa	Predicted RBP	4.23	□□□□□ -1.73
SP100-216	ENST00000488180	UTP14A	Q9BVJ6	771 aa	Known RBP	4.23	□□□□□ -1.73
SP100-216	ENST00000488180	XPO4	Q9C0E2	1151 aa	Known RBP	4.23	□□□□□ -1.73
SP100-216	ENST00000488180	RAI14	Q9P0K7	980 aa		4.23	□□□□□ -1.73
SP100-216	ENST00000488180	ATP6V0A2	Q9Y487	856 aa		4.23	□□□□□ -1.73
SP100-216	ENST00000488180	ADGRA2	Q96PE1	1338 aa		4.23	□□□□□ -1.73
SP100-216	ENST00000488180	SI	P14410	1827 aa		4.23	□□□□□ -1.73
SP100-216	ENST00000488180	ZSCAN12	O43309	604 aa		4.23	□□□□□ -1.73
SP100-216	ENST00000488180	ERLIN1	O75477	346 aa		4.23	□□□□□ -1.73
SP100-216	ENST00000488180	BBOX1	O75936	387 aa		4.23	□□□□□ -1.73
SP100-216	ENST00000488180	IFIT2	P09913	472 aa	Known RBP	4.23	□□□□□ -1.73
SP100-216	ENST00000488180	IL1R1	P14778	569 aa		4.23	□□□□□ -1.73
SP100-216	ENST00000488180	KCNJ6	P48051	423 aa		4.23	□□□□□ -1.73
SP100-216	ENST00000488180	MAP3K9	P80192	1104 aa		4.23	□□□□□ -1.73
SP100-216	ENST00000488180	TCIRG1	Q13488	830 aa		4.23	□□□□□ -1.73
SP100-216	ENST00000488180	BIRC2	Q13490	618 aa		4.23	□□□□□ -1.73
SP100-216	ENST00000488180	DHX8	Q14562	1220 aa	Known RBP	4.23	□□□□□ -1.73
SP100-216	ENST00000488180	ME3	Q16798	604 aa		4.23	□□□□□ -1.73
SP100-216	ENST00000488180	VPS53	Q5VIR6	699 aa		4.23	□□□□□ -1.73
SP100-216	ENST00000488180	FBXW10	Q5XX13	1052 aa		4.23	□□□□□ -1.73
SP100-216	ENST00000488180	WWC2	Q6AWC2	1192 aa		4.23	□□□□□ -1.73
SP100-216	ENST00000488180	VGLL2	Q8N8G2	317 aa		4.23	□□□□□ -1.73
SP100-216	ENST00000488180	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
SP100-216	ENST00000488180	MPHOSPH8	Q99549	860 aa		4.23	□□□□□ -1.73
SP100-216	ENST00000488180	GINM1	Q9NU53	330 aa		4.23	□□□□□ -1.73
SP100-216	ENST00000488180	CYP46A1	Q9Y6A2	500 aa		4.23	□□□□□ -1.73
SP100-216	ENST00000488180	KIN	O60870	393 aa	Known RBP	4.23	□□□□□ -1.73
SP100-216	ENST00000488180	NEBL	O76041	1014 aa		4.23	□□□□□ -1.73
SP100-216	ENST00000488180	LMNB1	P20700	586 aa		4.23	□□□□□ -1.73
SP100-216	ENST00000488180	RSRC2	Q7L4I2	434 aa	Known RBP	4.23	□□□□□ -1.73
SP100-216	ENST00000488180	KAT2B	Q92831	832 aa		4.23	□□□□□ -1.73
SP100-216	ENST00000488180	ERCC4	Q92889	916 aa	Predicted RBP	4.23	□□□□□ -1.73
SP100-216	ENST00000488180	ACBD3	Q9H3P7	528 aa		4.23	□□□□□ -1.73
SP100-216	ENST00000488180	FAM204A	Q9H8W3	233 aa		4.23	□□□□□ -1.73
SP100-216	ENST00000488180	GPR108	Q9NPR9	543 aa		4.23	□□□□□ -1.73
SP100-216	ENST00000488180		H0YHG0	523 aa		4.22	□□□□□ -1.73
SP100-216	ENST00000488180	FANCG	O15287	622 aa		4.22	□□□□□ -1.73
SP100-216	ENST00000488180	SGSM2	O43147	1006 aa		4.22	□□□□□ -1.73
SP100-216	ENST00000488180	ALDH1B1	P30837	517 aa		4.22	□□□□□ -1.73
SP100-216	ENST00000488180	RDX	P35241	583 aa	Known RBP	4.22	□□□□□ -1.73
SP100-216	ENST00000488180	APLP1	P51693	650 aa		4.22	□□□□□ -1.73
SP100-216	ENST00000488180	NBPF20	Q3BBV1	942 aa		4.22	□□□□□ -1.73
SP100-216	ENST00000488180	BEND6	Q5SZJ8	279 aa	Predicted RBP	4.22	□□□□□ -1.73
SP100-216	ENST00000488180	CCDC73	Q6ZRK6	1079 aa		4.22	□□□□□ -1.73
SP100-216	ENST00000488180	FAM43B	Q6ZT52	329 aa	Predicted RBP	4.22	□□□□□ -1.73
SP100-216	ENST00000488180	USP50	Q70EL3	339 aa	Predicted RBP	4.22	□□□□□ -1.73
SP100-216	ENST00000488180	CCAR1	Q8IX12	1150 aa	Known RBP	4.22	□□□□□ -1.73
SP100-216	ENST00000488180	GPC2	Q8N158	579 aa		4.22	□□□□□ -1.73
SP100-216	ENST00000488180	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	4.22	□□□□□ -1.73
SP100-216	ENST00000488180	DDX11	Q96FC9	970 aa		4.22	□□□□□ -1.73
SP100-216	ENST00000488180	SDF4	Q9BRK5	362 aa		4.22	□□□□□ -1.73
SP100-216	ENST00000488180	SUGCT	Q9HAC7	445 aa		4.22	□□□□□ -1.73
SP100-216	ENST00000488180	RBM28	Q9NW13	759 aa	Known RBP	4.22	□□□□□ -1.73
SP100-216	ENST00000488180	CFAP45	Q9UL16	551 aa		4.22	□□□□□ -1.73
SP100-216	ENST00000488180	ZBTB1	Q9Y2K1	713 aa		4.22	□□□□□ -1.73
SP100-216	ENST00000488180	EBAG9	O00559	213 aa		4.22	□□□□□ -1.73
SP100-216	ENST00000488180	IRF6	O14896	467 aa		4.22	□□□□□ -1.73
SP100-216	ENST00000488180	SARNP	P82979	210 aa	Known RBP	4.22	□□□□□ -1.73
SP100-216	ENST00000488180	ADCK5	Q3MIX3	580 aa		4.22	□□□□□ -1.73
SP100-216	ENST00000488180	PRPF40B	Q6NWY9	871 aa	Known RBP	4.22	□□□□□ -1.73
SP100-216	ENST00000488180	NLRP10	Q86W26	655 aa		4.22	□□□□□ -1.73
SP100-216	ENST00000488180	FAM71B	Q8TC56	605 aa		4.22	□□□□□ -1.73
SP100-216	ENST00000488180	WDR24	Q96S15	920 aa		4.22	□□□□□ -1.73
SP100-216	ENST00000488180	METTL22	Q9BUU2	404 aa	Predicted RBP	4.22	□□□□□ -1.73
SP100-216	ENST00000488180	IL1RAPL2	Q9NP60	686 aa		4.22	□□□□□ -1.73
SP100-216	ENST00000488180	GNL3L	Q9NVN8	582 aa	Known RBP	4.22	□□□□□ -1.73
SP100-216	ENST00000488180	DBF4	Q9UBU7	674 aa	Predicted RBP	4.22	□□□□□ -1.73
SP100-216	ENST00000488180	SYNPO2	Q9UMS6	1093 aa		4.22	□□□□□ -1.73
SP100-216	ENST00000488180	SLC45A1	Q9Y2W3	748 aa		4.22	□□□□□ -1.73
SP100-216	ENST00000488180	GLTPD2	A6NH11	291 aa		4.21	□□□□□ -1.73
SP100-216	ENST00000488180		H3BQV1	296 aa		4.21	□□□□□ -1.73
SP100-216	ENST00000488180	GNAI2	P04899	355 aa		4.21	□□□□□ -1.73
SP100-216	ENST00000488180	ZKSCAN1	P17029	563 aa	Predicted RBP	4.21	□□□□□ -1.73
SP100-216	ENST00000488180	INPP5B	P32019	993 aa		4.21	□□□□□ -1.73
SP100-216	ENST00000488180	CHMP4BP1	P59074	171 aa		4.21	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms