RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 VGLL2Q8N8G2 317 aa9.7□□□□□ -0.86
NECTIN3-209ENST00000488016 ZNF592Q92610 1267 aa9.7□□□□□ -0.86
NECTIN3-209ENST00000488016 TMPRSS4Q9NRS4 437 aa9.7□□□□□ -0.86
NECTIN3-209ENST00000488016 MKRN1Q9UHC7 482 aaKnown RBP9.7□□□□□ -0.86
NECTIN3-209ENST00000488016 DNMT3LQ9UJW3 386 aa9.7□□□□□ -0.86
NECTIN3-209ENST00000488016 IQSEC3Q9UPP2 1182 aaPredicted RBP9.7□□□□□ -0.86
NECTIN3-209ENST00000488016 SUPT16HQ9Y5B9 1047 aaKnown RBP9.7□□□□□ -0.86
NECTIN3-209ENST00000488016 EYA2O00167 538 aa9.69□□□□□ -0.86
NECTIN3-209ENST00000488016 SPINT1O43278 529 aa9.69□□□□□ -0.86
NECTIN3-209ENST00000488016 GNAI3P08754 354 aa9.69□□□□□ -0.86
NECTIN3-209ENST00000488016 VEGFAP15692 232 aaPredicted RBP9.69□□□□□ -0.86
NECTIN3-209ENST00000488016 GMPRP36959 345 aa9.69□□□□□ -0.86
NECTIN3-209ENST00000488016 GYG1P46976 350 aa9.69□□□□□ -0.86
NECTIN3-209ENST00000488016 MTMR14Q8NCE2 650 aa9.69□□□□□ -0.86
NECTIN3-209ENST00000488016 TRPM4Q8TD43 1214 aa9.69□□□□□ -0.86
NECTIN3-209ENST00000488016 AGBL1Q96MI9 1066 aa9.69□□□□□ -0.86
NECTIN3-209ENST00000488016 ANKRD2Q9GZV1 360 aa9.69□□□□□ -0.86
NECTIN3-209ENST00000488016 TAF1DQ9H5J8 278 aaPredicted RBP9.69□□□□□ -0.86
NECTIN3-209ENST00000488016 LEMD3Q9Y2U8 911 aa9.69□□□□□ -0.86
NECTIN3-209ENST00000488016 EPHX2P34913 555 aa9.68□□□□□ -0.86
NECTIN3-209ENST00000488016 FMR1Q06787 632 aaKnown RBP eCLIP9.68□□□□□ -0.86
NECTIN3-209ENST00000488016 NR1H3Q13133 447 aa9.68□□□□□ -0.86
NECTIN3-209ENST00000488016 MVPQ14764 893 aaKnown RBP9.68□□□□□ -0.86
NECTIN3-209ENST00000488016 DLK2Q6UY11 383 aa9.68□□□□□ -0.86
NECTIN3-209ENST00000488016 VPS33BQ9H267 617 aa9.68□□□□□ -0.86
NECTIN3-209ENST00000488016 HACL1Q9UJ83 578 aa9.68□□□□□ -0.86
NECTIN3-209ENST00000488016 SCN4AP35499 1836 aa9.68□□□□□ -0.86
NECTIN3-209ENST00000488016 ASTN2O75129 1339 aaPredicted RBP9.67□□□□□ -0.86
NECTIN3-209ENST00000488016 ADH1AP07327 375 aa9.67□□□□□ -0.86
NECTIN3-209ENST00000488016 ADORA1P30542 326 aa9.67□□□□□ -0.86
NECTIN3-209ENST00000488016 HIRAP54198 1017 aaPredicted RBP9.67□□□□□ -0.86
NECTIN3-209ENST00000488016 RRP1P56182 461 aaKnown RBP9.67□□□□□ -0.86
NECTIN3-209ENST00000488016 MAP1SQ66K74 1059 aaPredicted RBP9.67□□□□□ -0.86
NECTIN3-209ENST00000488016 ABHD8Q96I13 439 aa9.67□□□□□ -0.86
NECTIN3-209ENST00000488016 FAM84BQ96KN1 310 aaPredicted RBP9.67□□□□□ -0.86
NECTIN3-209ENST00000488016 CD209Q9NNX6 404 aa9.67□□□□□ -0.86
NECTIN3-209ENST00000488016 POLMQ9NP87 494 aaPredicted RBP9.67□□□□□ -0.86
NECTIN3-209ENST00000488016 GPRC5DQ9NZD1 345 aa9.67□□□□□ -0.86
NECTIN3-209ENST00000488016 SCAF8Q9UPN6 1271 aaKnown RBP9.67□□□□□ -0.86
NECTIN3-209ENST00000488016 PSME4Q14997 1843 aa9.67□□□□□ -0.86
NECTIN3-209ENST00000488016 ADAMTSL1Q8N6G6 1762 aa9.67□□□□□ -0.86
NECTIN3-209ENST00000488016 MROH5Q6ZUA9 1318 aa9.66□□□□□ -0.86
NECTIN3-209ENST00000488016 FIGNL2A6NMB9 653 aa9.66□□□□□ -0.86
NECTIN3-209ENST00000488016 F8W031 263 aaPredicted RBP9.66□□□□□ -0.86
NECTIN3-209ENST00000488016 PDE8BO95263 885 aa9.66□□□□□ -0.86
NECTIN3-209ENST00000488016 FGFR2P21802 821 aa9.66□□□□□ -0.86
NECTIN3-209ENST00000488016 MCCD1P59942 119 aaPredicted RBP9.66□□□□□ -0.86
NECTIN3-209ENST00000488016 GTF2IP78347 998 aa9.66□□□□□ -0.86
NECTIN3-209ENST00000488016 TFCP2Q12800 502 aa9.66□□□□□ -0.86
NECTIN3-209ENST00000488016 MTX1Q13505 466 aa9.66□□□□□ -0.86
NECTIN3-209ENST00000488016 GRIK5Q16478 980 aa9.66□□□□□ -0.86
NECTIN3-209ENST00000488016 TBC1D10BQ4KMP7 808 aaPredicted RBP9.66□□□□□ -0.86
NECTIN3-209ENST00000488016 DACT2Q5SW24 774 aa9.66□□□□□ -0.86
NECTIN3-209ENST00000488016 CEP85Q6P2H3 762 aa9.66□□□□□ -0.86
NECTIN3-209ENST00000488016 CERS5Q8N5B7 392 aa9.66□□□□□ -0.86
NECTIN3-209ENST00000488016 COPRSQ9NQ92 184 aa9.66□□□□□ -0.86
NECTIN3-209ENST00000488016 PRDM10Q9NQV6 1147 aa9.66□□□□□ -0.86
NECTIN3-209ENST00000488016 SNRKQ9NRH2 765 aa9.66□□□□□ -0.86
NECTIN3-209ENST00000488016 STK17AQ9UEE5 414 aa9.66□□□□□ -0.86
NECTIN3-209ENST00000488016 CNOT7Q9UIV1 285 aaKnown RBP9.66□□□□□ -0.86
NECTIN3-209ENST00000488016 PCDHAC2Q9Y5I4 1007 aa9.66□□□□□ -0.86
NECTIN3-209ENST00000488016 COL1A1P02452 1464 aaPredicted RBP9.66□□□□□ -0.86
NECTIN3-209ENST00000488016 AOX1Q06278 1338 aa9.65□□□□□ -0.86
NECTIN3-209ENST00000488016 IQCA1LA6NCM1 817 aa9.65□□□□□ -0.86
NECTIN3-209ENST00000488016 USP17L3A6NCW0 530 aa9.65□□□□□ -0.86
NECTIN3-209ENST00000488016 USP17L4A6NCW7 530 aa9.65□□□□□ -0.86
NECTIN3-209ENST00000488016 VIL1P09327 827 aaKnown RBP9.65□□□□□ -0.86
NECTIN3-209ENST00000488016 LMOD1P29536 600 aaPredicted RBP9.65□□□□□ -0.86
NECTIN3-209ENST00000488016 LBX1P52954 281 aa9.65□□□□□ -0.86
NECTIN3-209ENST00000488016 ATP8B2P98198 1209 aa9.65□□□□□ -0.86
NECTIN3-209ENST00000488016 MLLT1Q03111 559 aaPredicted RBP9.65□□□□□ -0.86
NECTIN3-209ENST00000488016 CHAF1AQ13111 956 aaPredicted RBP9.65□□□□□ -0.86
NECTIN3-209ENST00000488016 UBE4AQ14139 1066 aa9.65□□□□□ -0.86
NECTIN3-209ENST00000488016 TNIP1Q15025 636 aa9.65□□□□□ -0.86
NECTIN3-209ENST00000488016 RNF20Q5VTR2 975 aa9.65□□□□□ -0.86
NECTIN3-209ENST00000488016 USP17L1Q7RTZ2 530 aa9.65□□□□□ -0.86
NECTIN3-209ENST00000488016 SIRT2Q8IXJ6 389 aa9.65□□□□□ -0.86
NECTIN3-209ENST00000488016 INSM2Q96T92 566 aaPredicted RBP9.65□□□□□ -0.86
NECTIN3-209ENST00000488016 COA1Q9GZY4 146 aa9.65□□□□□ -0.86
NECTIN3-209ENST00000488016 BCL11AQ9H165 835 aa9.65□□□□□ -0.86
NECTIN3-209ENST00000488016 ZNF395Q9H8N7 513 aaPredicted RBP9.65□□□□□ -0.86
NECTIN3-209ENST00000488016 PRM3Q9NNZ6 103 aa9.65□□□□□ -0.86
NECTIN3-209ENST00000488016 CYLDQ9NQC7 956 aa9.65□□□□□ -0.86
NECTIN3-209ENST00000488016 TRAF5O00463 557 aa9.64□□□□□ -0.87
NECTIN3-209ENST00000488016 PPFIA3O75145 1194 aa9.64□□□□□ -0.87
NECTIN3-209ENST00000488016 SASH1O94885 1247 aa9.64□□□□□ -0.87
NECTIN3-209ENST00000488016 IL15P40933 162 aaPredicted RBP9.64□□□□□ -0.87
NECTIN3-209ENST00000488016 TIMM10P62072 90 aa9.64□□□□□ -0.87
NECTIN3-209ENST00000488016 PUM3Q15397 648 aaKnown RBP9.64□□□□□ -0.87
NECTIN3-209ENST00000488016 ATP2B3Q16720 1220 aa9.64□□□□□ -0.87
NECTIN3-209ENST00000488016 TTLL5Q6EMB2 1281 aa9.64□□□□□ -0.87
NECTIN3-209ENST00000488016 C15orf52Q6ZUT6 534 aaKnown RBP9.64□□□□□ -0.87
NECTIN3-209ENST00000488016 ZNF804AQ7Z570 1209 aa9.64□□□□□ -0.87
NECTIN3-209ENST00000488016 PODNQ7Z5L7 613 aa9.64□□□□□ -0.87
NECTIN3-209ENST00000488016 KIAA0825Q8IV33 1275 aa9.64□□□□□ -0.87
NECTIN3-209ENST00000488016 SSH3Q8TE77 659 aa9.64□□□□□ -0.87
NECTIN3-209ENST00000488016 CRBNQ96SW2 442 aa9.64□□□□□ -0.87
NECTIN3-209ENST00000488016 GMLQ99445 158 aa9.64□□□□□ -0.87
NECTIN3-209ENST00000488016 ZBTB40Q9NUA8 1239 aa9.64□□□□□ -0.87
NECTIN3-209ENST00000488016 EXOC6BQ9Y2D4 811 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms