RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 CABP5Q9NP86 173 aa13□□□□□ -0.33
HDLBP-242ENST00000488013 TSHZ2Q9NRE2 1034 aa13□□□□□ -0.33
HDLBP-242ENST00000488013 MYH7P12883 1935 aa13□□□□□ -0.33
HDLBP-242ENST00000488013 TIAM2Q8IVF5 1701 aa12.99□□□□□ -0.33
HDLBP-242ENST00000488013 UNCXA6NJT0 531 aa12.99□□□□□ -0.33
HDLBP-242ENST00000488013 B4E1Z4 1266 aa12.99□□□□□ -0.33
HDLBP-242ENST00000488013 PRC1O43663 620 aa12.99□□□□□ -0.33
HDLBP-242ENST00000488013 LIFRP42702 1097 aa12.99□□□□□ -0.33
HDLBP-242ENST00000488013 TFAP4Q01664 338 aa12.99□□□□□ -0.33
HDLBP-242ENST00000488013 TMEM179Q6ZVK1 233 aa12.99□□□□□ -0.33
HDLBP-242ENST00000488013 DGKHQ86XP1 1220 aa12.99□□□□□ -0.33
HDLBP-242ENST00000488013 NEDD1Q8NHV4 660 aa12.99□□□□□ -0.33
HDLBP-242ENST00000488013 DYNLL2Q96FJ2 89 aa12.99□□□□□ -0.33
HDLBP-242ENST00000488013 ZSWIM5Q9P217 1185 aa12.99□□□□□ -0.33
HDLBP-242ENST00000488013 SYNPO2Q9UMS6 1093 aa12.99□□□□□ -0.33
HDLBP-242ENST00000488013 MYH2Q9UKX2 1941 aa12.99□□□□□ -0.33
HDLBP-242ENST00000488013 ASTN2O75129 1339 aaPredicted RBP12.98□□□□□ -0.33
HDLBP-242ENST00000488013 NEDD4P46934 1319 aa12.98□□□□□ -0.33
HDLBP-242ENST00000488013 ZNF646O15015 1829 aaPredicted RBP12.98□□□□□ -0.33
HDLBP-242ENST00000488013 IFIT3O14879 490 aaKnown RBP12.98□□□□□ -0.33
HDLBP-242ENST00000488013 RASA1P20936 1047 aa12.98□□□□□ -0.33
HDLBP-242ENST00000488013 SHMT1P34896 483 aa12.98□□□□□ -0.33
HDLBP-242ENST00000488013 RCAN1P53805 252 aa12.98□□□□□ -0.33
HDLBP-242ENST00000488013 SYNE3Q6ZMZ3 975 aa12.98□□□□□ -0.33
HDLBP-242ENST00000488013 ANKS1AQ92625 1134 aa12.98□□□□□ -0.33
HDLBP-242ENST00000488013 ZSCAN31Q96LW9 406 aaPredicted RBP12.98□□□□□ -0.33
HDLBP-242ENST00000488013 ZSCAN10Q96SZ4 725 aaPredicted RBP12.98□□□□□ -0.33
HDLBP-242ENST00000488013 UPF3BQ9BZI7 483 aaKnown RBP12.98□□□□□ -0.33
HDLBP-242ENST00000488013 KANSL2Q9H9L4 492 aa12.98□□□□□ -0.33
HDLBP-242ENST00000488013 ANGEL1Q9UNK9 670 aaKnown RBP12.98□□□□□ -0.33
HDLBP-242ENST00000488013 RBM19Q9Y4C8 960 aaKnown RBP12.98□□□□□ -0.33
HDLBP-242ENST00000488013 WDR90Q96KV7 1748 aa12.98□□□□□ -0.33
HDLBP-242ENST00000488013 CTNND1O60716 968 aaKnown RBP12.97□□□□□ -0.33
HDLBP-242ENST00000488013 PRDM1O75626 825 aa12.97□□□□□ -0.33
HDLBP-242ENST00000488013 ASNSP08243 561 aa12.97□□□□□ -0.33
HDLBP-242ENST00000488013 PRR29P0C7W0 189 aa12.97□□□□□ -0.33
HDLBP-242ENST00000488013 IREB2P48200 963 aaKnown RBP12.97□□□□□ -0.33
HDLBP-242ENST00000488013 FKBP1BP68106 108 aa12.97□□□□□ -0.33
HDLBP-242ENST00000488013 PPP2R5BQ15173 497 aa12.97□□□□□ -0.33
HDLBP-242ENST00000488013 ABCB5Q2M3G0 1257 aa12.97□□□□□ -0.33
HDLBP-242ENST00000488013 SLC4A8Q2Y0W8 1093 aa12.97□□□□□ -0.33
HDLBP-242ENST00000488013 TMEM67Q5HYA8 995 aa12.97□□□□□ -0.33
HDLBP-242ENST00000488013 USP48Q86UV5 1035 aa12.97□□□□□ -0.33
HDLBP-242ENST00000488013 HSCBQ8IWL3 235 aa12.97□□□□□ -0.33
HDLBP-242ENST00000488013 AGXT2Q9BYV1 514 aa12.97□□□□□ -0.33
HDLBP-242ENST00000488013 TBC1D2Q9BYX2 928 aa12.97□□□□□ -0.33
HDLBP-242ENST00000488013 DAXXQ9UER7 740 aaPredicted RBP12.97□□□□□ -0.33
HDLBP-242ENST00000488013 LIMCH1Q9UPQ0 1083 aa12.97□□□□□ -0.33
HDLBP-242ENST00000488013 TAF6LQ9Y6J9 622 aa12.97□□□□□ -0.33
HDLBP-242ENST00000488013 PLIN4Q96Q06 1357 aa12.96□□□□□ -0.33
HDLBP-242ENST00000488013 CAP2P40123 477 aa12.96□□□□□ -0.33
HDLBP-242ENST00000488013 EVCP57679 992 aa12.96□□□□□ -0.33
HDLBP-242ENST00000488013 WTAPQ15007 396 aa12.96□□□□□ -0.33
HDLBP-242ENST00000488013 IFIT1BQ5T764 474 aaKnown RBP12.96□□□□□ -0.33
HDLBP-242ENST00000488013 NBPF12Q5TAG4 269 aaPredicted RBP12.96□□□□□ -0.33
HDLBP-242ENST00000488013 CHADLQ6NUI6 762 aa12.96□□□□□ -0.33
HDLBP-242ENST00000488013 ARMC9Q7Z3E5 817 aa12.96□□□□□ -0.33
HDLBP-242ENST00000488013 SGMS1Q86VZ5 419 aa12.96□□□□□ -0.33
HDLBP-242ENST00000488013 STK11IPQ8N1F8 1099 aa12.96□□□□□ -0.33
HDLBP-242ENST00000488013 SLC44A5Q8NCS7 719 aa12.96□□□□□ -0.33
HDLBP-242ENST00000488013 SH2D4AQ9H788 454 aa12.96□□□□□ -0.33
HDLBP-242ENST00000488013 NMRK2Q9NPI5 230 aa12.96□□□□□ -0.33
HDLBP-242ENST00000488013 SH2B1Q9NRF2 756 aaPredicted RBP12.96□□□□□ -0.33
HDLBP-242ENST00000488013 ZNF112Q9UJU3 913 aa12.96□□□□□ -0.33
HDLBP-242ENST00000488013 SCN4AP35499 1836 aa12.95□□□□□ -0.34
HDLBP-242ENST00000488013 CCDC69A6NI79 296 aa12.95□□□□□ -0.34
HDLBP-242ENST00000488013 MPHOSPH10O00566 681 aaKnown RBP12.95□□□□□ -0.34
HDLBP-242ENST00000488013 SH2B2O14492 632 aaPredicted RBP12.95□□□□□ -0.34
HDLBP-242ENST00000488013 DHX16O60231 1041 aaKnown RBP12.95□□□□□ -0.34
HDLBP-242ENST00000488013 TTLL1O95922 423 aa12.95□□□□□ -0.34
HDLBP-242ENST00000488013 CALM1P0DP23 149 aa12.95□□□□□ -0.34
HDLBP-242ENST00000488013 CALM2P0DP24 149 aa12.95□□□□□ -0.34
HDLBP-242ENST00000488013 CALM3P0DP25 149 aa12.95□□□□□ -0.34
HDLBP-242ENST00000488013 NOVP48745 357 aa12.95□□□□□ -0.34
HDLBP-242ENST00000488013 NFXL1Q6ZNB6 911 aa12.95□□□□□ -0.34
HDLBP-242ENST00000488013 Q6ZUG5 572 aa12.95□□□□□ -0.34
HDLBP-242ENST00000488013 MIGA2Q7L4E1 593 aa12.95□□□□□ -0.34
HDLBP-242ENST00000488013 CATIPQ7Z7H3 387 aa12.95□□□□□ -0.34
HDLBP-242ENST00000488013 IGDCC4Q8TDY8 1250 aa12.95□□□□□ -0.34
HDLBP-242ENST00000488013 ZNF526Q8TF50 670 aaPredicted RBP12.95□□□□□ -0.34
HDLBP-242ENST00000488013 CDCA5Q96FF9 252 aa12.95□□□□□ -0.34
HDLBP-242ENST00000488013 ZNF274Q96GC6 653 aaPredicted RBP12.95□□□□□ -0.34
HDLBP-242ENST00000488013 DNAJC18Q9H819 358 aa12.95□□□□□ -0.34
HDLBP-242ENST00000488013 INCENPQ9NQS7 918 aa12.95□□□□□ -0.34
HDLBP-242ENST00000488013 PICK1Q9NRD5 415 aa12.95□□□□□ -0.34
HDLBP-242ENST00000488013 SLC12A7Q9Y666 1083 aa12.95□□□□□ -0.34
HDLBP-242ENST00000488013 TNKSO95271 1327 aa12.94□□□□□ -0.34
HDLBP-242ENST00000488013 MYO5AQ9Y4I1 1855 aaKnown RBP12.94□□□□□ -0.34
HDLBP-242ENST00000488013 CCDC196A0A1B0GTZ2 297 aa12.94□□□□□ -0.34
HDLBP-242ENST00000488013 PHF20L1A8MW92 1017 aa12.94□□□□□ -0.34
HDLBP-242ENST00000488013 ADM5C9JUS6 153 aa12.94□□□□□ -0.34
HDLBP-242ENST00000488013 TOP1P11387 765 aaKnown RBP12.94□□□□□ -0.34
HDLBP-242ENST00000488013 AK2P54819 239 aa12.94□□□□□ -0.34
HDLBP-242ENST00000488013 ANTXR2P58335 489 aa12.94□□□□□ -0.34
HDLBP-242ENST00000488013 MAP3K9P80192 1104 aa12.94□□□□□ -0.34
HDLBP-242ENST00000488013 MAP3K11Q16584 847 aa12.94□□□□□ -0.34
HDLBP-242ENST00000488013 FAM47AQ5JRC9 791 aa12.94□□□□□ -0.34
HDLBP-242ENST00000488013 CYB5R4Q7L1T6 521 aa12.94□□□□□ -0.34
HDLBP-242ENST00000488013 KLRG1Q96E93 195 aa12.94□□□□□ -0.34
HDLBP-242ENST00000488013 GLIS2Q9BZE0 524 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms