RNA–Protein interactions for RNA: ENST00000487996.5

HLA-DMB-261, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-261ENST00000487996 SULF1Q8IWU6 871 aa12.43□□□□□ -0.42
HLA-DMB-261ENST00000487996 ZFPM1Q8IX07 1006 aa12.43□□□□□ -0.42
HLA-DMB-261ENST00000487996 DYNLL2Q96FJ2 89 aa12.43□□□□□ -0.42
HLA-DMB-261ENST00000487996 DEFB129Q9H1M3 183 aa12.43□□□□□ -0.42
HLA-DMB-261ENST00000487996 TAF1DQ9H5J8 278 aaPredicted RBP12.43□□□□□ -0.42
HLA-DMB-261ENST00000487996 ZSWIM5Q9P217 1185 aa12.43□□□□□ -0.42
HLA-DMB-261ENST00000487996 K7ELQ4 463 aaPredicted RBP12.42□□□□□ -0.42
HLA-DMB-261ENST00000487996 PRDM1O75626 825 aa12.42□□□□□ -0.42
HLA-DMB-261ENST00000487996 CPA1P15085 419 aa12.42□□□□□ -0.42
HLA-DMB-261ENST00000487996 VEGFAP15692 232 aaPredicted RBP12.42□□□□□ -0.42
HLA-DMB-261ENST00000487996 HIRAP54198 1017 aaPredicted RBP12.42□□□□□ -0.42
HLA-DMB-261ENST00000487996 AK2P54819 239 aa12.42□□□□□ -0.42
HLA-DMB-261ENST00000487996 Q6ZUG5 572 aa12.42□□□□□ -0.42
HLA-DMB-261ENST00000487996 SH3BP5LQ7L8J4 393 aa12.42□□□□□ -0.42
HLA-DMB-261ENST00000487996 CHMP4CQ96CF2 233 aa12.42□□□□□ -0.42
HLA-DMB-261ENST00000487996 ZSCAN31Q96LW9 406 aaPredicted RBP12.42□□□□□ -0.42
HLA-DMB-261ENST00000487996 AGXT2Q9BYV1 514 aa12.42□□□□□ -0.42
HLA-DMB-261ENST00000487996 TMEM39BQ9GZU3 492 aa12.42□□□□□ -0.42
HLA-DMB-261ENST00000487996 ANGEL1Q9UNK9 670 aaKnown RBP12.42□□□□□ -0.42
HLA-DMB-261ENST00000487996 LIMCH1Q9UPQ0 1083 aa12.42□□□□□ -0.42
HLA-DMB-261ENST00000487996 PITPNM1O00562 1244 aa12.42□□□□□ -0.42
HLA-DMB-261ENST00000487996 IFIT3O14879 490 aaKnown RBP12.42□□□□□ -0.42
HLA-DMB-261ENST00000487996 RASA1P20936 1047 aa12.42□□□□□ -0.42
HLA-DMB-261ENST00000487996 SUPT20HL1Q3ZLR7 823 aa12.42□□□□□ -0.42
HLA-DMB-261ENST00000487996 TMEM67Q5HYA8 995 aa12.42□□□□□ -0.42
HLA-DMB-261ENST00000487996 DCAF15Q66K64 600 aa12.42□□□□□ -0.42
HLA-DMB-261ENST00000487996 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.42□□□□□ -0.42
HLA-DMB-261ENST00000487996 SH2B1Q9NRF2 756 aaPredicted RBP12.42□□□□□ -0.42
HLA-DMB-261ENST00000487996 TCP11L1Q9NUJ3 509 aa12.42□□□□□ -0.42
HLA-DMB-261ENST00000487996 PLIN4Q96Q06 1357 aa12.41□□□□□ -0.42
HLA-DMB-261ENST00000487996 LIFRP42702 1097 aa12.41□□□□□ -0.42
HLA-DMB-261ENST00000487996 ANTXR2P58335 489 aa12.41□□□□□ -0.42
HLA-DMB-261ENST00000487996 TFAP4Q01664 338 aa12.41□□□□□ -0.42
HLA-DMB-261ENST00000487996 TATDN1Q6P1N9 297 aa12.41□□□□□ -0.42
HLA-DMB-261ENST00000487996 CYB5R4Q7L1T6 521 aa12.41□□□□□ -0.42
HLA-DMB-261ENST00000487996 SLC44A5Q8NCS7 719 aa12.41□□□□□ -0.42
HLA-DMB-261ENST00000487996 NEDD1Q8NHV4 660 aa12.41□□□□□ -0.42
HLA-DMB-261ENST00000487996 TCEANC2Q96MN5 208 aa12.41□□□□□ -0.42
HLA-DMB-261ENST00000487996 IPO9Q96P70 1041 aaKnown RBP12.41□□□□□ -0.42
HLA-DMB-261ENST00000487996 ZSCAN10Q96SZ4 725 aaPredicted RBP12.41□□□□□ -0.42
HLA-DMB-261ENST00000487996 TBC1D2Q9BYX2 928 aa12.41□□□□□ -0.42
HLA-DMB-261ENST00000487996 INCENPQ9NQS7 918 aa12.41□□□□□ -0.42
HLA-DMB-261ENST00000487996 TACC3Q9Y6A5 838 aa12.41□□□□□ -0.42
HLA-DMB-261ENST00000487996 SIPA1L1O43166 1804 aa12.41□□□□□ -0.42
HLA-DMB-261ENST00000487996 ASTN2O75129 1339 aaPredicted RBP12.4□□□□□ -0.42
HLA-DMB-261ENST00000487996 SMIM22K7EJ46 135 aa12.4□□□□□ -0.42
HLA-DMB-261ENST00000487996 SH2B2O14492 632 aaPredicted RBP12.4□□□□□ -0.42
HLA-DMB-261ENST00000487996 SHMT1P34896 483 aa12.4□□□□□ -0.42
HLA-DMB-261ENST00000487996 EVX2Q03828 476 aa12.4□□□□□ -0.42
HLA-DMB-261ENST00000487996 WTAPQ15007 396 aa12.4□□□□□ -0.42
HLA-DMB-261ENST00000487996 CERKLQ49MI3 558 aaPredicted RBP12.4□□□□□ -0.42
HLA-DMB-261ENST00000487996 EAPPQ56P03 285 aaPredicted RBP12.4□□□□□ -0.42
HLA-DMB-261ENST00000487996 SYNE3Q6ZMZ3 975 aa12.4□□□□□ -0.42
HLA-DMB-261ENST00000487996 CHST3Q7LGC8 479 aa12.4□□□□□ -0.42
HLA-DMB-261ENST00000487996 BRF1Q92994 677 aa12.4□□□□□ -0.42
HLA-DMB-261ENST00000487996 PGAP2Q9UHJ9 254 aa12.4□□□□□ -0.42
HLA-DMB-261ENST00000487996 CEP350Q5VT06 3117 aa12.4□□□□□ -0.42
HLA-DMB-261ENST00000487996 TNKSO95271 1327 aa12.4□□□□□ -0.42
HLA-DMB-261ENST00000487996 POLR2AP24928 1970 aaKnown RBP12.4□□□□□ -0.42
HLA-DMB-261ENST00000487996 CCDC69A6NI79 296 aa12.4□□□□□ -0.43
HLA-DMB-261ENST00000487996 HSP90AA1P07900 732 aaKnown RBP12.4□□□□□ -0.43
HLA-DMB-261ENST00000487996 MAP3K10Q02779 954 aa12.4□□□□□ -0.43
HLA-DMB-261ENST00000487996 TOB2Q14106 344 aaPredicted RBP12.4□□□□□ -0.43
HLA-DMB-261ENST00000487996 IFIT1BQ5T764 474 aaKnown RBP12.4□□□□□ -0.43
HLA-DMB-261ENST00000487996 NFXL1Q6ZNB6 911 aa12.4□□□□□ -0.43
HLA-DMB-261ENST00000487996 KRT26Q7Z3Y9 468 aa12.4□□□□□ -0.43
HLA-DMB-261ENST00000487996 SGMS1Q86VZ5 419 aa12.4□□□□□ -0.43
HLA-DMB-261ENST00000487996 DGKHQ86XP1 1220 aa12.4□□□□□ -0.43
HLA-DMB-261ENST00000487996 IGDCC4Q8TDY8 1250 aa12.4□□□□□ -0.43
HLA-DMB-261ENST00000487996 TEPSINQ96N21 525 aa12.4□□□□□ -0.43
HLA-DMB-261ENST00000487996 LRRC2Q9BYS8 371 aa12.4□□□□□ -0.43
HLA-DMB-261ENST00000487996 CABP5Q9NP86 173 aa12.4□□□□□ -0.43
HLA-DMB-261ENST00000487996 GINM1Q9NU53 330 aa12.4□□□□□ -0.43
HLA-DMB-261ENST00000487996 CD2BP2O95400 341 aaKnown RBP12.39□□□□□ -0.43
HLA-DMB-261ENST00000487996 NF2P35240 595 aa12.39□□□□□ -0.43
HLA-DMB-261ENST00000487996 RCAN1P53805 252 aa12.39□□□□□ -0.43
HLA-DMB-261ENST00000487996 EVCP57679 992 aa12.39□□□□□ -0.43
HLA-DMB-261ENST00000487996 FAM47AQ5JRC9 791 aa12.39□□□□□ -0.43
HLA-DMB-261ENST00000487996 TMEM179Q6ZVK1 233 aa12.39□□□□□ -0.43
HLA-DMB-261ENST00000487996 ZNF274Q96GC6 653 aaPredicted RBP12.39□□□□□ -0.43
HLA-DMB-261ENST00000487996 DNAJC18Q9H819 358 aa12.39□□□□□ -0.43
HLA-DMB-261ENST00000487996 SSUH2Q9Y2M2 353 aa12.39□□□□□ -0.43
HLA-DMB-261ENST00000487996 POTECB2RU33 542 aa12.38□□□□□ -0.43
HLA-DMB-261ENST00000487996 MPHOSPH10O00566 681 aaKnown RBP12.38□□□□□ -0.43
HLA-DMB-261ENST00000487996 KIF3CO14782 793 aa12.38□□□□□ -0.43
HLA-DMB-261ENST00000487996 ABCB5Q2M3G0 1257 aa12.38□□□□□ -0.43
HLA-DMB-261ENST00000487996 NOL8Q76FK4 1167 aaKnown RBP12.38□□□□□ -0.43
HLA-DMB-261ENST00000487996 CDC37L1Q7L3B6 337 aa12.38□□□□□ -0.43
HLA-DMB-261ENST00000487996 ENAHQ8N8S7 591 aaPredicted RBP12.38□□□□□ -0.43
HLA-DMB-261ENST00000487996 TMX3Q96JJ7 454 aa12.38□□□□□ -0.43
HLA-DMB-261ENST00000487996 ZKSCAN3Q9BRR0 538 aa12.38□□□□□ -0.43
HLA-DMB-261ENST00000487996 ZNF341Q9BYN7 854 aa12.38□□□□□ -0.43
HLA-DMB-261ENST00000487996 LY9Q9HBG7 655 aa12.38□□□□□ -0.43
HLA-DMB-261ENST00000487996 SLC12A7Q9Y666 1083 aa12.38□□□□□ -0.43
HLA-DMB-261ENST00000487996 DHX16O60231 1041 aaKnown RBP12.37□□□□□ -0.43
HLA-DMB-261ENST00000487996 CALM1P0DP23 149 aa12.37□□□□□ -0.43
HLA-DMB-261ENST00000487996 CALM2P0DP24 149 aa12.37□□□□□ -0.43
HLA-DMB-261ENST00000487996 CALM3P0DP25 149 aa12.37□□□□□ -0.43
HLA-DMB-261ENST00000487996 COL9A3Q14050 684 aaPredicted RBP12.37□□□□□ -0.43
HLA-DMB-261ENST00000487996 PPP2R5BQ15173 497 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms