RNA–Protein interactions for RNA: ENST00000487952.1

NUP188-207, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-207ENST00000487952 ZNF112Q9UJU3 913 aa16.62■□□□□ 0.25
NUP188-207ENST00000487952 NEDD4P46934 1319 aa16.62■□□□□ 0.25
NUP188-207ENST00000487952 LAMA4Q16363 1823 aa16.61■□□□□ 0.25
NUP188-207ENST00000487952 PHF20L1A8MW92 1017 aa16.61■□□□□ 0.25
NUP188-207ENST00000487952 B4E1Z4 1266 aa16.61■□□□□ 0.25
NUP188-207ENST00000487952 UBE2Q2LH0YL09 131 aa16.61■□□□□ 0.25
NUP188-207ENST00000487952 TSPY3P0CV98 308 aa16.61■□□□□ 0.25
NUP188-207ENST00000487952 TSPY8P0CW00 308 aa16.61■□□□□ 0.25
NUP188-207ENST00000487952 INPP5BP32019 993 aa16.61■□□□□ 0.25
NUP188-207ENST00000487952 CAP2P40123 477 aa16.61■□□□□ 0.25
NUP188-207ENST00000487952 MAP3K11Q16584 847 aa16.61■□□□□ 0.25
NUP188-207ENST00000487952 MOB2Q70IA6 237 aa16.61■□□□□ 0.25
NUP188-207ENST00000487952 RASEFQ8IZ41 740 aa16.61■□□□□ 0.25
NUP188-207ENST00000487952 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.61■□□□□ 0.25
NUP188-207ENST00000487952 SNX14Q9Y5W7 946 aa16.61■□□□□ 0.25
NUP188-207ENST00000487952 PAPPA2Q9BXP8 1791 aa16.61■□□□□ 0.25
NUP188-207ENST00000487952 SIPA1L1O43166 1804 aa16.61■□□□□ 0.25
NUP188-207ENST00000487952 TMEM88BA6NKF7 163 aa16.6■□□□□ 0.25
NUP188-207ENST00000487952 GH2P01242 217 aa16.6■□□□□ 0.25
NUP188-207ENST00000487952 ASNSP08243 561 aa16.6■□□□□ 0.25
NUP188-207ENST00000487952 FGRP09769 529 aa16.6■□□□□ 0.25
NUP188-207ENST00000487952 AKR1B1P15121 316 aa16.6■□□□□ 0.25
NUP188-207ENST00000487952 PSMA5P28066 241 aa16.6■□□□□ 0.25
NUP188-207ENST00000487952 ANAPC15P60006 121 aa16.6■□□□□ 0.25
NUP188-207ENST00000487952 TFAP4Q01664 338 aa16.6■□□□□ 0.25
NUP188-207ENST00000487952 TSGA10IPQ3SY00 556 aa16.6■□□□□ 0.25
NUP188-207ENST00000487952 CST9Q5W186 159 aa16.6■□□□□ 0.25
NUP188-207ENST00000487952 STOX1Q6ZVD7 989 aa16.6■□□□□ 0.25
NUP188-207ENST00000487952 TMEM179Q6ZVK1 233 aa16.6■□□□□ 0.25
NUP188-207ENST00000487952 SCYL3Q8IZE3 742 aa16.6■□□□□ 0.25
NUP188-207ENST00000487952 KCNB2Q92953 911 aa16.6■□□□□ 0.25
NUP188-207ENST00000487952 GINM1Q9NU53 330 aa16.6■□□□□ 0.25
NUP188-207ENST00000487952 TAF6LQ9Y6J9 622 aa16.6■□□□□ 0.25
NUP188-207ENST00000487952 KDM4AO75164 1064 aa16.59■□□□□ 0.25
NUP188-207ENST00000487952 HUNKP57058 714 aa16.59■□□□□ 0.25
NUP188-207ENST00000487952 FAM47AQ5JRC9 791 aa16.59■□□□□ 0.25
NUP188-207ENST00000487952 NOL9Q5SY16 702 aaKnown RBP16.59■□□□□ 0.25
NUP188-207ENST00000487952 ZKSCAN4Q969J2 545 aaPredicted RBP16.59■□□□□ 0.25
NUP188-207ENST00000487952 JAKMIP1Q96N16 626 aaKnown RBP16.59■□□□□ 0.25
NUP188-207ENST00000487952 NEK1Q96PY6 1258 aa16.59■□□□□ 0.25
NUP188-207ENST00000487952 ZBTB21Q9ULJ3 1066 aa16.59■□□□□ 0.25
NUP188-207ENST00000487952 ABT1Q9ULW3 272 aaKnown RBP16.59■□□□□ 0.25
NUP188-207ENST00000487952 TACC3Q9Y6A5 838 aa16.59■□□□□ 0.25
NUP188-207ENST00000487952 UNCXA6NJT0 531 aa16.58■□□□□ 0.24
NUP188-207ENST00000487952 HMGB1P09429 215 aaKnown RBP16.58■□□□□ 0.24
NUP188-207ENST00000487952 VGLL4Q14135 290 aa16.58■□□□□ 0.24
NUP188-207ENST00000487952 RRP1BQ14684 758 aaKnown RBP16.58■□□□□ 0.24
NUP188-207ENST00000487952 RAB3GAP1Q15042 981 aa16.58■□□□□ 0.24
NUP188-207ENST00000487952 PPP4R3BQ5MIZ7 849 aa16.58■□□□□ 0.24
NUP188-207ENST00000487952 IQCA1Q86XH1 822 aa16.58■□□□□ 0.24
NUP188-207ENST00000487952 NEDD1Q8NHV4 660 aa16.58■□□□□ 0.24
NUP188-207ENST00000487952 UBAC1Q9BSL1 405 aa16.58■□□□□ 0.24
NUP188-207ENST00000487952 TRPM7Q96QT4 1865 aa16.58■□□□□ 0.24
NUP188-207ENST00000487952 MCM5P33992 734 aa16.57■□□□□ 0.24
NUP188-207ENST00000487952 APLP1P51693 650 aa16.57■□□□□ 0.24
NUP188-207ENST00000487952 SART3Q15020 963 aaKnown RBP16.57■□□□□ 0.24
NUP188-207ENST00000487952 ADCK5Q3MIX3 580 aa16.57■□□□□ 0.24
NUP188-207ENST00000487952 CCDC178Q5BJE1 867 aa16.57■□□□□ 0.24
NUP188-207ENST00000487952 LDLRAD1Q5T700 205 aa16.57■□□□□ 0.24
NUP188-207ENST00000487952 BLOC1S2Q6QNY1 142 aa16.57■□□□□ 0.24
NUP188-207ENST00000487952 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.57■□□□□ 0.24
NUP188-207ENST00000487952 SLC10A4Q96EP9 437 aa16.57■□□□□ 0.24
NUP188-207ENST00000487952 ELP3Q9H9T3 547 aa16.57■□□□□ 0.24
NUP188-207ENST00000487952 PLIN4Q96Q06 1357 aa16.56■□□□□ 0.24
NUP188-207ENST00000487952 ERICH2A1L162 156 aa16.56■□□□□ 0.24
NUP188-207ENST00000487952 USP17L5A8MUK1 530 aa16.56■□□□□ 0.24
NUP188-207ENST00000487952 CASTP20810 708 aaKnown RBP16.56■□□□□ 0.24
NUP188-207ENST00000487952 RBM25P49756 843 aaKnown RBP16.56■□□□□ 0.24
NUP188-207ENST00000487952 ATP2B2Q01814 1243 aa16.56■□□□□ 0.24
NUP188-207ENST00000487952 ICA1Q05084 483 aa16.56■□□□□ 0.24
NUP188-207ENST00000487952 SEPT2Q15019 361 aa16.56■□□□□ 0.24
NUP188-207ENST00000487952 MB21D2Q8IYB1 491 aaPredicted RBP16.56■□□□□ 0.24
NUP188-207ENST00000487952 CLMNQ96JQ2 1002 aa16.56■□□□□ 0.24
NUP188-207ENST00000487952 KANSL2Q9H9L4 492 aa16.56■□□□□ 0.24
NUP188-207ENST00000487952 AS3MTQ9HBK9 375 aa16.56■□□□□ 0.24
NUP188-207ENST00000487952 ZSWIM5Q9P217 1185 aa16.56■□□□□ 0.24
NUP188-207ENST00000487952 SNCAIPQ9Y6H5 919 aa16.56■□□□□ 0.24
NUP188-207ENST00000487952 TLL2Q9Y6L7 1015 aa16.56■□□□□ 0.24
NUP188-207ENST00000487952 PRC1O43663 620 aa16.55■□□□□ 0.24
NUP188-207ENST00000487952 PTPRAP18433 802 aa16.55■□□□□ 0.24
NUP188-207ENST00000487952 SHROOM1Q2M3G4 852 aaPredicted RBP16.55■□□□□ 0.24
NUP188-207ENST00000487952 CYB5R4Q7L1T6 521 aa16.55■□□□□ 0.24
NUP188-207ENST00000487952 SAPCD2Q86UD0 394 aa16.55■□□□□ 0.24
NUP188-207ENST00000487952 ERO1BQ86YB8 467 aa16.55■□□□□ 0.24
NUP188-207ENST00000487952 TBC1D32Q96NH3 1257 aa16.55■□□□□ 0.24
NUP188-207ENST00000487952 TBC1D2Q9BYX2 928 aa16.55■□□□□ 0.24
NUP188-207ENST00000487952 TM6SF1Q9BZW5 370 aa16.55■□□□□ 0.24
NUP188-207ENST00000487952 ARHGEF10LQ9HCE6 1279 aa16.55■□□□□ 0.24
NUP188-207ENST00000487952 MYH8P13535 1937 aa16.55■□□□□ 0.24
NUP188-207ENST00000487952 IFIT3O14879 490 aaKnown RBP16.54■□□□□ 0.24
NUP188-207ENST00000487952 JAG1P78504 1218 aa16.54■□□□□ 0.24
NUP188-207ENST00000487952 FGD1P98174 961 aa16.54■□□□□ 0.24
NUP188-207ENST00000487952 PAXIP1Q6ZW49 1069 aaPredicted RBP16.54■□□□□ 0.24
NUP188-207ENST00000487952 DHX32Q7L7V1 743 aaKnown RBP16.54■□□□□ 0.24
NUP188-207ENST00000487952 CEP95Q96GE4 821 aa16.54■□□□□ 0.24
NUP188-207ENST00000487952 FEZ1Q99689 392 aa16.54■□□□□ 0.24
NUP188-207ENST00000487952 ZKSCAN3Q9BRR0 538 aa16.54■□□□□ 0.24
NUP188-207ENST00000487952 SH2D4AQ9H788 454 aa16.54■□□□□ 0.24
NUP188-207ENST00000487952 CREBZFQ9NS37 354 aa16.54■□□□□ 0.24
NUP188-207ENST00000487952 TCP11L1Q9NUJ3 509 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms