RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 RNF41Q9H4P4 317 aaPredicted RBP15.8■□□□□ 0.12
COL4A6-207ENST00000487645 PHIPQ8WWQ0 1821 aa15.8■□□□□ 0.12
COL4A6-207ENST00000487645 ORC4O43929 436 aa15.79■□□□□ 0.12
COL4A6-207ENST00000487645 ZNF157P51786 506 aaPredicted RBP15.79■□□□□ 0.12
COL4A6-207ENST00000487645 HAND2P61296 217 aa15.79■□□□□ 0.12
COL4A6-207ENST00000487645 ABCB5Q2M3G0 1257 aa15.79■□□□□ 0.12
COL4A6-207ENST00000487645 RNF20Q5VTR2 975 aa15.79■□□□□ 0.12
COL4A6-207ENST00000487645 MFSD6Q6ZSS7 791 aa15.79■□□□□ 0.12
COL4A6-207ENST00000487645 ERO1BQ86YB8 467 aa15.79■□□□□ 0.12
COL4A6-207ENST00000487645 CCDC102AQ96A19 550 aa15.79■□□□□ 0.12
COL4A6-207ENST00000487645 CLMNQ96JQ2 1002 aa15.79■□□□□ 0.12
COL4A6-207ENST00000487645 TBC1D2Q9BYX2 928 aa15.79■□□□□ 0.12
COL4A6-207ENST00000487645 NBPF3Q9H094 633 aa15.79■□□□□ 0.12
COL4A6-207ENST00000487645 CABP5Q9NP86 173 aa15.79■□□□□ 0.12
COL4A6-207ENST00000487645 PICK1Q9NRD5 415 aa15.79■□□□□ 0.12
COL4A6-207ENST00000487645 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.79■□□□□ 0.12
COL4A6-207ENST00000487645 SNCAIPQ9Y6H5 919 aa15.79■□□□□ 0.12
COL4A6-207ENST00000487645 CYP21A2P08686 494 aa15.78■□□□□ 0.12
COL4A6-207ENST00000487645 PTPRAP18433 802 aa15.78■□□□□ 0.12
COL4A6-207ENST00000487645 RASA1P20936 1047 aa15.78■□□□□ 0.12
COL4A6-207ENST00000487645 C8orf34Q49A92 452 aa15.78■□□□□ 0.12
COL4A6-207ENST00000487645 STK11IPQ8N1F8 1099 aa15.78■□□□□ 0.12
COL4A6-207ENST00000487645 USP26Q9BXU7 913 aa15.78■□□□□ 0.12
COL4A6-207ENST00000487645 GREB1LQ9C091 1923 aaPredicted RBP15.77■□□□□ 0.12
COL4A6-207ENST00000487645 SPDYE5A6NIY4 337 aa15.77■□□□□ 0.12
COL4A6-207ENST00000487645 SLC27A2O14975 620 aa15.77■□□□□ 0.12
COL4A6-207ENST00000487645 GH2P01242 217 aa15.77■□□□□ 0.12
COL4A6-207ENST00000487645 JAG1P78504 1218 aa15.77■□□□□ 0.12
COL4A6-207ENST00000487645 PPATQ06203 517 aa15.77■□□□□ 0.12
COL4A6-207ENST00000487645 TSGA10IPQ3SY00 556 aa15.77■□□□□ 0.12
COL4A6-207ENST00000487645 CREB3L3Q68CJ9 461 aa15.77■□□□□ 0.12
COL4A6-207ENST00000487645 TMEM179Q6ZVK1 233 aa15.77■□□□□ 0.12
COL4A6-207ENST00000487645 CNNM2Q9H8M5 875 aa15.77■□□□□ 0.12
COL4A6-207ENST00000487645 ELP3Q9H9T3 547 aa15.77■□□□□ 0.12
COL4A6-207ENST00000487645 INCENPQ9NQS7 918 aa15.77■□□□□ 0.12
COL4A6-207ENST00000487645 ZBTB21Q9ULJ3 1066 aa15.77■□□□□ 0.12
COL4A6-207ENST00000487645 TACC3Q9Y6A5 838 aa15.77■□□□□ 0.12
COL4A6-207ENST00000487645 USP17L5A8MUK1 530 aa15.76■□□□□ 0.11
COL4A6-207ENST00000487645 PRDM1O75626 825 aa15.76■□□□□ 0.11
COL4A6-207ENST00000487645 GDF11O95390 407 aa15.76■□□□□ 0.11
COL4A6-207ENST00000487645 ZBTB48P10074 688 aaPredicted RBP15.76■□□□□ 0.11
COL4A6-207ENST00000487645 AKR1B1P15121 316 aa15.76■□□□□ 0.11
COL4A6-207ENST00000487645 ECE1P42892 770 aa15.76■□□□□ 0.11
COL4A6-207ENST00000487645 TBC1D10CQ8IV04 446 aa15.76■□□□□ 0.11
COL4A6-207ENST00000487645 NEDD1Q8NHV4 660 aa15.76■□□□□ 0.11
COL4A6-207ENST00000487645 KCNB2Q92953 911 aa15.76■□□□□ 0.11
COL4A6-207ENST00000487645 OPTNQ96CV9 577 aa15.76■□□□□ 0.11
COL4A6-207ENST00000487645 WDR18Q9BV38 432 aa15.76■□□□□ 0.11
COL4A6-207ENST00000487645 KRT23Q9C075 422 aa15.76■□□□□ 0.11
COL4A6-207ENST00000487645 PTPRFP10586 1907 aa15.75■□□□□ 0.11
COL4A6-207ENST00000487645 MYH4Q9Y623 1939 aa15.75■□□□□ 0.11
COL4A6-207ENST00000487645 E7EWF7 191 aa15.75■□□□□ 0.11
COL4A6-207ENST00000487645 MPHOSPH10O00566 681 aaKnown RBP15.75■□□□□ 0.11
COL4A6-207ENST00000487645 SLC10A3P09131 477 aa15.75■□□□□ 0.11
COL4A6-207ENST00000487645 ZKSCAN1P17029 563 aaPredicted RBP15.75■□□□□ 0.11
COL4A6-207ENST00000487645 GUCY1A2P33402 732 aa15.75■□□□□ 0.11
COL4A6-207ENST00000487645 HSPA4P34932 840 aa15.75■□□□□ 0.11
COL4A6-207ENST00000487645 TFAP4Q01664 338 aa15.75■□□□□ 0.11
COL4A6-207ENST00000487645 TRDNQ13061 729 aa15.75■□□□□ 0.11
COL4A6-207ENST00000487645 PPIL2Q13356 520 aa15.75■□□□□ 0.11
COL4A6-207ENST00000487645 SPRYD7Q5W111 196 aa15.75■□□□□ 0.11
COL4A6-207ENST00000487645 ESR2Q92731 530 aa15.75■□□□□ 0.11
COL4A6-207ENST00000487645 WNK4Q96J92 1243 aa15.75■□□□□ 0.11
COL4A6-207ENST00000487645 KANSL2Q9H9L4 492 aa15.75■□□□□ 0.11
COL4A6-207ENST00000487645 AS3MTQ9HBK9 375 aa15.75■□□□□ 0.11
COL4A6-207ENST00000487645 AFG3L2Q9Y4W6 797 aa15.75■□□□□ 0.11
COL4A6-207ENST00000487645 ZHX2Q9Y6X8 837 aa15.75■□□□□ 0.11
COL4A6-207ENST00000487645 TSPY2A6NKD2 308 aa15.74■□□□□ 0.11
COL4A6-207ENST00000487645 FAM155AB1AL88 458 aaPredicted RBP15.74■□□□□ 0.11
COL4A6-207ENST00000487645 CXCL11O14625 94 aa15.74■□□□□ 0.11
COL4A6-207ENST00000487645 RANBP6O60518 1105 aaKnown RBP15.74■□□□□ 0.11
COL4A6-207ENST00000487645 SEC24BO95487 1268 aa15.74■□□□□ 0.11
COL4A6-207ENST00000487645 TSPY3P0CV98 308 aa15.74■□□□□ 0.11
COL4A6-207ENST00000487645 TSPY8P0CW00 308 aa15.74■□□□□ 0.11
COL4A6-207ENST00000487645 MCCP23508 829 aa15.74■□□□□ 0.11
COL4A6-207ENST00000487645 HTRA3P83110 453 aa15.74■□□□□ 0.11
COL4A6-207ENST00000487645 SEPT2Q15019 361 aa15.74■□□□□ 0.11
COL4A6-207ENST00000487645 RAB3GAP1Q15042 981 aa15.74■□□□□ 0.11
COL4A6-207ENST00000487645 CYP4F22Q6NT55 531 aa15.74■□□□□ 0.11
COL4A6-207ENST00000487645 RASAL3Q86YV0 1011 aa15.74■□□□□ 0.11
COL4A6-207ENST00000487645 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.74■□□□□ 0.11
COL4A6-207ENST00000487645 TOMM22Q9NS69 142 aa15.74■□□□□ 0.11
COL4A6-207ENST00000487645 TCP11L1Q9NUJ3 509 aa15.74■□□□□ 0.11
COL4A6-207ENST00000487645 IGKV6D-41A0A0C4DH26 115 aa15.73■□□□□ 0.11
COL4A6-207ENST00000487645 GJA5P36382 358 aa15.73■□□□□ 0.11
COL4A6-207ENST00000487645 NOGQ13253 232 aa15.73■□□□□ 0.11
COL4A6-207ENST00000487645 KRT32Q14532 448 aa15.73■□□□□ 0.11
COL4A6-207ENST00000487645 SHROOM1Q2M3G4 852 aaPredicted RBP15.73■□□□□ 0.11
COL4A6-207ENST00000487645 FAM47AQ5JRC9 791 aa15.73■□□□□ 0.11
COL4A6-207ENST00000487645 RRP12Q5JTH9 1297 aaKnown RBP15.73■□□□□ 0.11
COL4A6-207ENST00000487645 PPP4R3BQ5MIZ7 849 aa15.73■□□□□ 0.11
COL4A6-207ENST00000487645 ZNF280CQ8ND82 737 aa15.73■□□□□ 0.11
COL4A6-207ENST00000487645 NCOA7Q8NI08 942 aa15.73■□□□□ 0.11
COL4A6-207ENST00000487645 CNKSR2Q8WXI2 1034 aa15.73■□□□□ 0.11
COL4A6-207ENST00000487645 OTUD5Q96G74 571 aa15.73■□□□□ 0.11
COL4A6-207ENST00000487645 CAPNS2Q96L46 248 aa15.73■□□□□ 0.11
COL4A6-207ENST00000487645 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.73■□□□□ 0.11
COL4A6-207ENST00000487645 ZSWIM5Q9P217 1185 aa15.73■□□□□ 0.11
COL4A6-207ENST00000487645 KCNH4Q9UQ05 1017 aa15.73■□□□□ 0.11
COL4A6-207ENST00000487645 PLIN4Q96Q06 1357 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms