RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 HOXA7P31268 230 aaPredicted RBP14.87□□□□□ -0.03
VPS16-208ENST00000487461 MAP3K12Q12852 859 aa14.87□□□□□ -0.03
VPS16-208ENST00000487461 U2AF1L4Q8WU68 220 aaKnown RBP14.87□□□□□ -0.03
VPS16-208ENST00000487461 P2RX7Q99572 595 aaKnown RBP14.87□□□□□ -0.03
VPS16-208ENST00000487461 GINM1Q9NU53 330 aa14.87□□□□□ -0.03
VPS16-208ENST00000487461 TMOD4Q9NZQ9 345 aa14.87□□□□□ -0.03
VPS16-208ENST00000487461 GJD2Q9UKL4 321 aa14.87□□□□□ -0.03
VPS16-208ENST00000487461 ZBTB21Q9ULJ3 1066 aa14.87□□□□□ -0.03
VPS16-208ENST00000487461 SIPA1L1O43166 1804 aa14.87□□□□□ -0.03
VPS16-208ENST00000487461 DOCK3Q8IZD9 2030 aa14.87□□□□□ -0.03
VPS16-208ENST00000487461 C19orf81C9J6K1 198 aa14.86□□□□□ -0.03
VPS16-208ENST00000487461 USP17L10C9JJH3 530 aa14.86□□□□□ -0.03
VPS16-208ENST00000487461 PEX10O60683 326 aa14.86□□□□□ -0.03
VPS16-208ENST00000487461 SGPL1O95470 568 aa14.86□□□□□ -0.03
VPS16-208ENST00000487461 USP5P45974 858 aa14.86□□□□□ -0.03
VPS16-208ENST00000487461 HSP90AB4PQ58FF6 505 aa14.86□□□□□ -0.03
VPS16-208ENST00000487461 SIRT2Q8IXJ6 389 aa14.86□□□□□ -0.03
VPS16-208ENST00000487461 TAOK2Q9UL54 1235 aa14.86□□□□□ -0.03
VPS16-208ENST00000487461 APBB1O00213 710 aa14.85□□□□□ -0.03
VPS16-208ENST00000487461 MS4A1P11836 297 aa14.85□□□□□ -0.03
VPS16-208ENST00000487461 IRX3P78415 501 aaPredicted RBP14.85□□□□□ -0.03
VPS16-208ENST00000487461 TATDN1Q6P1N9 297 aa14.85□□□□□ -0.03
VPS16-208ENST00000487461 CERS3Q8IU89 383 aa14.85□□□□□ -0.03
VPS16-208ENST00000487461 RPAP2Q8IXW5 612 aaPredicted RBP14.85□□□□□ -0.03
VPS16-208ENST00000487461 DPF3Q92784 378 aa14.85□□□□□ -0.03
VPS16-208ENST00000487461 EMILIN3Q9NT22 766 aa14.85□□□□□ -0.03
VPS16-208ENST00000487461 ZBTB40Q9NUA8 1239 aa14.85□□□□□ -0.03
VPS16-208ENST00000487461 MORF4L1Q9UBU8 362 aa14.85□□□□□ -0.03
VPS16-208ENST00000487461 COLQQ9Y215 455 aaPredicted RBP14.85□□□□□ -0.03
VPS16-208ENST00000487461 COG6Q9Y2V7 657 aa14.85□□□□□ -0.03
VPS16-208ENST00000487461 MAST2Q6P0Q8 1798 aa14.84□□□□□ -0.03
VPS16-208ENST00000487461 GH2P01242 217 aa14.84□□□□□ -0.03
VPS16-208ENST00000487461 PLCD1P51178 756 aa14.84□□□□□ -0.03
VPS16-208ENST00000487461 TMED8Q6PL24 325 aaPredicted RBP14.84□□□□□ -0.03
VPS16-208ENST00000487461 DEFB118Q96PH6 123 aa14.84□□□□□ -0.03
VPS16-208ENST00000487461 RIOK1Q9BRS2 568 aaKnown RBP14.84□□□□□ -0.03
VPS16-208ENST00000487461 TXNRD2Q9NNW7 524 aa14.84□□□□□ -0.03
VPS16-208ENST00000487461 RBPJLQ9UBG7 517 aa14.84□□□□□ -0.03
VPS16-208ENST00000487461 ATAD5Q96QE3 1844 aa14.84□□□□□ -0.03
VPS16-208ENST00000487461 CDK5RAP2Q96SN8 1893 aa14.84□□□□□ -0.03
VPS16-208ENST00000487461 LOC285556D6RIA3 1793 aa14.83□□□□□ -0.03
VPS16-208ENST00000487461 CEP290O15078 2479 aa14.83□□□□□ -0.04
VPS16-208ENST00000487461 TFRCP02786 760 aaKnown RBP14.83□□□□□ -0.04
VPS16-208ENST00000487461 HERVK_113P62684 666 aa14.83□□□□□ -0.04
VPS16-208ENST00000487461 Q3C1V9 767 aa14.83□□□□□ -0.04
VPS16-208ENST00000487461 USP17L2Q6R6M4 530 aa14.83□□□□□ -0.04
VPS16-208ENST00000487461 POTEEQ6S8J3 1075 aa14.83□□□□□ -0.04
VPS16-208ENST00000487461 TTC6Q86TZ1 520 aa14.83□□□□□ -0.04
VPS16-208ENST00000487461 CLASRPQ8N2M8 674 aaKnown RBP14.83□□□□□ -0.04
VPS16-208ENST00000487461 KIF1BPQ96EK5 621 aa14.83□□□□□ -0.04
VPS16-208ENST00000487461 EHD4Q9H223 541 aa14.83□□□□□ -0.04
VPS16-208ENST00000487461 PAK6Q9NQU5 681 aaPredicted RBP14.83□□□□□ -0.04
VPS16-208ENST00000487461 SERPINB13Q9UIV8 391 aa14.83□□□□□ -0.04
VPS16-208ENST00000487461 DDX19BQ9UMR2 479 aa14.83□□□□□ -0.04
VPS16-208ENST00000487461 MAGEB6P1A0A0J9YX57 407 aa14.82□□□□□ -0.04
VPS16-208ENST00000487461 FARP2O94887 1054 aaPredicted RBP14.82□□□□□ -0.04
VPS16-208ENST00000487461 PDE6AP16499 860 aa14.82□□□□□ -0.04
VPS16-208ENST00000487461 TRIM32Q13049 653 aa14.82□□□□□ -0.04
VPS16-208ENST00000487461 TTF1Q15361 905 aaPredicted RBP14.82□□□□□ -0.04
VPS16-208ENST00000487461 CERKLQ49MI3 558 aaPredicted RBP14.82□□□□□ -0.04
VPS16-208ENST00000487461 SLC9C2Q5TAH2 1124 aa14.82□□□□□ -0.04
VPS16-208ENST00000487461 GPRC5AQ8NFJ5 357 aa14.82□□□□□ -0.04
VPS16-208ENST00000487461 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.82□□□□□ -0.04
VPS16-208ENST00000487461 CRISPLD2Q9H0B8 497 aa14.82□□□□□ -0.04
VPS16-208ENST00000487461 BCL11AQ9H165 835 aa14.82□□□□□ -0.04
VPS16-208ENST00000487461 FOCADQ5VW36 1801 aa14.81□□□□□ -0.04
VPS16-208ENST00000487461 GOLIM4O00461 696 aa14.81□□□□□ -0.04
VPS16-208ENST00000487461 RAB11FIP3O75154 756 aa14.81□□□□□ -0.04
VPS16-208ENST00000487461 HMMRO75330 724 aa14.81□□□□□ -0.04
VPS16-208ENST00000487461 IFIT2P09913 472 aaKnown RBP14.81□□□□□ -0.04
VPS16-208ENST00000487461 EDC3Q96F86 508 aaKnown RBP14.81□□□□□ -0.04
VPS16-208ENST00000487461 DNAJC2Q99543 621 aaKnown RBP14.81□□□□□ -0.04
VPS16-208ENST00000487461 HTATIP2Q9BUP3 242 aa14.81□□□□□ -0.04
VPS16-208ENST00000487461 TCRBV5S4A2TA0A5A2 114 aa14.8□□□□□ -0.04
VPS16-208ENST00000487461 HMGCRP04035 888 aa14.8□□□□□ -0.04
VPS16-208ENST00000487461 POLR3DP05423 398 aaPredicted RBP14.8□□□□□ -0.04
VPS16-208ENST00000487461 CAPN2P17655 700 aa14.8□□□□□ -0.04
VPS16-208ENST00000487461 CYP2B6P20813 491 aa14.8□□□□□ -0.04
VPS16-208ENST00000487461 GUCY1A2P33402 732 aa14.8□□□□□ -0.04
VPS16-208ENST00000487461 SHMT1P34896 483 aa14.8□□□□□ -0.04
VPS16-208ENST00000487461 FXR1P51114 621 aaKnown RBP eCLIP14.8□□□□□ -0.04
VPS16-208ENST00000487461 EVX2Q03828 476 aa14.8□□□□□ -0.04
VPS16-208ENST00000487461 GABPAQ06546 454 aa14.8□□□□□ -0.04
VPS16-208ENST00000487461 RAB3GAP1Q15042 981 aa14.8□□□□□ -0.04
VPS16-208ENST00000487461 ZYXQ15942 572 aaKnown RBP14.8□□□□□ -0.04
VPS16-208ENST00000487461 ABCB5Q2M3G0 1257 aa14.8□□□□□ -0.04
VPS16-208ENST00000487461 ACER1Q8TDN7 264 aa14.8□□□□□ -0.04
VPS16-208ENST00000487461 C12orf42Q96LP6 360 aa14.8□□□□□ -0.04
VPS16-208ENST00000487461 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.8□□□□□ -0.04
VPS16-208ENST00000487461 RCAN3Q9UKA8 241 aa14.8□□□□□ -0.04
VPS16-208ENST00000487461 ZNF532Q9HCE3 1301 aa14.8□□□□□ -0.04
VPS16-208ENST00000487461 MYH1P12882 1939 aa14.79□□□□□ -0.04
VPS16-208ENST00000487461 ERVK-9P63128 1117 aa14.79□□□□□ -0.04
VPS16-208ENST00000487461 ERVK-24P63145 666 aa14.79□□□□□ -0.04
VPS16-208ENST00000487461 SLFNL1Q499Z3 407 aa14.79□□□□□ -0.04
VPS16-208ENST00000487461 CHRDL2Q6WN34 429 aa14.79□□□□□ -0.04
VPS16-208ENST00000487461 CATSPERGQ6ZRH7 1159 aa14.79□□□□□ -0.04
VPS16-208ENST00000487461 TRIB2Q92519 343 aa14.79□□□□□ -0.04
VPS16-208ENST00000487461 FEZ1Q99689 392 aa14.79□□□□□ -0.04
VPS16-208ENST00000487461 NUDT12Q9BQG2 462 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms