RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 ERC2O15083 957 aa14.78□□□□□ -0.04
TRIM56-204ENST00000487252 TBC1D12O60347 775 aa14.78□□□□□ -0.04
TRIM56-204ENST00000487252 HERVK_113P62684 666 aa14.78□□□□□ -0.04
TRIM56-204ENST00000487252 GNAI1P63096 354 aa14.78□□□□□ -0.04
TRIM56-204ENST00000487252 NHLH1Q02575 133 aa14.78□□□□□ -0.04
TRIM56-204ENST00000487252 FPGSQ05932 587 aa14.78□□□□□ -0.04
TRIM56-204ENST00000487252 TAF7LQ5H9L4 462 aa14.78□□□□□ -0.04
TRIM56-204ENST00000487252 MFSD14CQ5VZR4 134 aa14.78□□□□□ -0.04
TRIM56-204ENST00000487252 PLEKHH3Q7Z736 793 aa14.78□□□□□ -0.04
TRIM56-204ENST00000487252 VGLL2Q8N8G2 317 aa14.78□□□□□ -0.04
TRIM56-204ENST00000487252 EDC3Q96F86 508 aaKnown RBP14.78□□□□□ -0.04
TRIM56-204ENST00000487252 MYH13Q9UKX3 1938 aa14.78□□□□□ -0.04
TRIM56-204ENST00000487252 LRRC37A2A6NM11 1700 aa14.78□□□□□ -0.04
TRIM56-204ENST00000487252 MYBBP1AQ9BQG0 1328 aaKnown RBP14.77□□□□□ -0.04
TRIM56-204ENST00000487252 TLL1O43897 1013 aa14.77□□□□□ -0.05
TRIM56-204ENST00000487252 CLTBP09497 229 aa14.77□□□□□ -0.05
TRIM56-204ENST00000487252 HOXC6P09630 235 aa14.77□□□□□ -0.05
TRIM56-204ENST00000487252 CYBAP13498 195 aa14.77□□□□□ -0.05
TRIM56-204ENST00000487252 ERVK-9P63128 1117 aa14.77□□□□□ -0.05
TRIM56-204ENST00000487252 ERVK-24P63145 666 aa14.77□□□□□ -0.05
TRIM56-204ENST00000487252 DNAAF4Q8WXU2 420 aa14.77□□□□□ -0.05
TRIM56-204ENST00000487252 USP34Q70CQ2 3546 aa14.76□□□□□ -0.05
TRIM56-204ENST00000487252 PRR33A8MZF0 331 aa14.76□□□□□ -0.05
TRIM56-204ENST00000487252 KBTBD13C9JR72 458 aa14.76□□□□□ -0.05
TRIM56-204ENST00000487252 IGFBP4P22692 258 aa14.76□□□□□ -0.05
TRIM56-204ENST00000487252 IRX3P78415 501 aaPredicted RBP14.76□□□□□ -0.05
TRIM56-204ENST00000487252 WDR66Q8TBY9 1149 aa14.76□□□□□ -0.05
TRIM56-204ENST00000487252 OSBPL5Q9H0X9 879 aaPredicted RBP14.76□□□□□ -0.05
TRIM56-204ENST00000487252 CFAP54Q96N23 3096 aa14.75□□□□□ -0.05
TRIM56-204ENST00000487252 GRXCR1A8MXD5 290 aa14.75□□□□□ -0.05
TRIM56-204ENST00000487252 RAG1P15918 1043 aa14.75□□□□□ -0.05
TRIM56-204ENST00000487252 CNGA1P29973 690 aa14.75□□□□□ -0.05
TRIM56-204ENST00000487252 ADCYAP1R1P41586 468 aa14.75□□□□□ -0.05
TRIM56-204ENST00000487252 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.75□□□□□ -0.05
TRIM56-204ENST00000487252 STK31Q9BXU1 1019 aa14.75□□□□□ -0.05
TRIM56-204ENST00000487252 PRDX5P30044 214 aa14.74□□□□□ -0.05
TRIM56-204ENST00000487252 FLIIQ13045 1269 aa14.74□□□□□ -0.05
TRIM56-204ENST00000487252 C16orf59Q7L2K0 433 aa14.74□□□□□ -0.05
TRIM56-204ENST00000487252 HERVK_113Q902F9 699 aa14.74□□□□□ -0.05
TRIM56-204ENST00000487252 DDX4Q9NQI0 724 aaKnown RBP14.74□□□□□ -0.05
TRIM56-204ENST00000487252 SLC15A5A6NIM6 579 aa14.73□□□□□ -0.05
TRIM56-204ENST00000487252 PDE8BO95263 885 aa14.73□□□□□ -0.05
TRIM56-204ENST00000487252 SLC4A2P04920 1241 aa14.73□□□□□ -0.05
TRIM56-204ENST00000487252 CYP2C19P33261 490 aa14.73□□□□□ -0.05
TRIM56-204ENST00000487252 ZSCAN29Q8IWY8 852 aaPredicted RBP14.73□□□□□ -0.05
TRIM56-204ENST00000487252 GTF3C2Q8WUA4 911 aaPredicted RBP14.73□□□□□ -0.05
TRIM56-204ENST00000487252 WDR18Q9BV38 432 aa14.73□□□□□ -0.05
TRIM56-204ENST00000487252 KCNH6Q9H252 994 aa14.73□□□□□ -0.05
TRIM56-204ENST00000487252 RNF39Q9H2S5 420 aa14.73□□□□□ -0.05
TRIM56-204ENST00000487252 GBF1Q92538 1859 aa14.73□□□□□ -0.05
TRIM56-204ENST00000487252 MYH2Q9UKX2 1941 aa14.72□□□□□ -0.05
TRIM56-204ENST00000487252 GAKO14976 1311 aa14.72□□□□□ -0.05
TRIM56-204ENST00000487252 USP17L5A8MUK1 530 aa14.72□□□□□ -0.05
TRIM56-204ENST00000487252 POU3F3P20264 500 aaPredicted RBP14.72□□□□□ -0.05
TRIM56-204ENST00000487252 FGFR2P21802 821 aa14.72□□□□□ -0.05
TRIM56-204ENST00000487252 CAP2P40123 477 aa14.72□□□□□ -0.05
TRIM56-204ENST00000487252 BACE1P56817 501 aa14.72□□□□□ -0.05
TRIM56-204ENST00000487252 RRP1BQ14684 758 aaKnown RBP14.72□□□□□ -0.05
TRIM56-204ENST00000487252 LRRC41Q15345 812 aa14.72□□□□□ -0.05
TRIM56-204ENST00000487252 TMEM240Q5SV17 173 aa14.72□□□□□ -0.05
TRIM56-204ENST00000487252 NPLOC4Q8TAT6 608 aa14.72□□□□□ -0.05
TRIM56-204ENST00000487252 PHF24Q9UPV7 400 aa14.72□□□□□ -0.05
TRIM56-204ENST00000487252 PRRC2BQ5JSZ5 2229 aaKnown RBP14.72□□□□□ -0.05
TRIM56-204ENST00000487252 CACNA1FO60840 1977 aa14.71□□□□□ -0.05
TRIM56-204ENST00000487252 SEPT4O43236 478 aa14.71□□□□□ -0.05
TRIM56-204ENST00000487252 PTPREP23469 700 aa14.71□□□□□ -0.05
TRIM56-204ENST00000487252 ATP2B2Q01814 1243 aa14.71□□□□□ -0.05
TRIM56-204ENST00000487252 GRB14Q14449 540 aa14.71□□□□□ -0.05
TRIM56-204ENST00000487252 RAB30Q15771 203 aa14.71□□□□□ -0.05
TRIM56-204ENST00000487252 BEND3Q5T5X7 828 aa14.71□□□□□ -0.05
TRIM56-204ENST00000487252 CCDC129Q6ZRS4 1044 aa14.71□□□□□ -0.05
TRIM56-204ENST00000487252 FERMT2Q96AC1 680 aa14.71□□□□□ -0.05
TRIM56-204ENST00000487252 TOX2Q96NM4 488 aa14.71□□□□□ -0.05
TRIM56-204ENST00000487252 CD320Q9NPF0 282 aa14.71□□□□□ -0.05
TRIM56-204ENST00000487252 SALL1Q9NSC2 1324 aa14.7□□□□□ -0.06
TRIM56-204ENST00000487252 NPM3O75607 178 aaKnown RBP14.7□□□□□ -0.06
TRIM56-204ENST00000487252 CNMDO75829 334 aa14.7□□□□□ -0.06
TRIM56-204ENST00000487252 FOXK2Q01167 660 aa14.7□□□□□ -0.06
TRIM56-204ENST00000487252 CALD1Q05682 793 aaKnown RBP14.7□□□□□ -0.06
TRIM56-204ENST00000487252 FAAP100Q0VG06 881 aa14.7□□□□□ -0.06
TRIM56-204ENST00000487252 MTMR2Q13614 643 aa14.7□□□□□ -0.06
TRIM56-204ENST00000487252 LRRC24Q50LG9 513 aa14.7□□□□□ -0.06
TRIM56-204ENST00000487252 ANKRD33Q7Z3H0 272 aa14.7□□□□□ -0.06
TRIM56-204ENST00000487252 CCAR1Q8IX12 1150 aaKnown RBP14.7□□□□□ -0.06
TRIM56-204ENST00000487252 KAZALD1Q96I82 304 aa14.7□□□□□ -0.06
TRIM56-204ENST00000487252 FBXL18Q96ME1 805 aa14.7□□□□□ -0.06
TRIM56-204ENST00000487252 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.7□□□□□ -0.06
TRIM56-204ENST00000487252 AS3MTQ9HBK9 375 aa14.7□□□□□ -0.06
TRIM56-204ENST00000487252 TMEM39AQ9NV64 488 aa14.7□□□□□ -0.06
TRIM56-204ENST00000487252 COG5Q9UP83 839 aa14.7□□□□□ -0.06
TRIM56-204ENST00000487252 ZNF236Q9UL36 1845 aa14.7□□□□□ -0.06
TRIM56-204ENST00000487252 FAM196BA6NMK8 535 aa14.69□□□□□ -0.06
TRIM56-204ENST00000487252 GRM8O00222 908 aa14.69□□□□□ -0.06
TRIM56-204ENST00000487252 GLRX3O76003 335 aaKnown RBP14.69□□□□□ -0.06
TRIM56-204ENST00000487252 TIMP1P01033 207 aa14.69□□□□□ -0.06
TRIM56-204ENST00000487252 LDHBP07195 334 aaKnown RBP14.69□□□□□ -0.06
TRIM56-204ENST00000487252 FKBP5Q13451 457 aaPredicted RBP14.69□□□□□ -0.06
TRIM56-204ENST00000487252 MSRAQ9UJ68 235 aa14.69□□□□□ -0.06
TRIM56-204ENST00000487252 YBX2Q9Y2T7 364 aaKnown RBP14.69□□□□□ -0.06
TRIM56-204ENST00000487252 ZNF318Q5VUA4 2279 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms