RNA–Protein interactions for RNA: ENST00000487204.1

CCNB3-206, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 1,180 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-206ENST00000487204 GJB2P29033 226 aa8.42□□□□□ -1.06
CCNB3-206ENST00000487204 TNNI2P48788 182 aa8.42□□□□□ -1.06
CCNB3-206ENST00000487204 CDK8P49336 464 aa8.42□□□□□ -1.06
CCNB3-206ENST00000487204 MNX1P50219 401 aaPredicted RBP8.42□□□□□ -1.06
CCNB3-206ENST00000487204 METAP2P50579 478 aaKnown RBP eCLIP8.42□□□□□ -1.06
CCNB3-206ENST00000487204 SCRN1Q12765 414 aa8.42□□□□□ -1.06
CCNB3-206ENST00000487204 STK3Q13188 491 aa8.42□□□□□ -1.06
CCNB3-206ENST00000487204 PICALMQ13492 652 aa8.42□□□□□ -1.06
CCNB3-206ENST00000487204 TNFAIP1Q13829 316 aa8.42□□□□□ -1.06
CCNB3-206ENST00000487204 APOA5Q6Q788 366 aa8.42□□□□□ -1.06
CCNB3-206ENST00000487204 ARHGAP27Q6ZUM4 889 aa8.42□□□□□ -1.06
CCNB3-206ENST00000487204 NECAB1Q8N987 351 aa8.42□□□□□ -1.06
CCNB3-206ENST00000487204 SMARCC2Q8TAQ2 1214 aa8.42□□□□□ -1.06
CCNB3-206ENST00000487204 WASF1Q92558 559 aa8.42□□□□□ -1.06
CCNB3-206ENST00000487204 ANKS1AQ92625 1134 aa8.42□□□□□ -1.06
CCNB3-206ENST00000487204 MAP3K14Q99558 947 aa8.42□□□□□ -1.06
CCNB3-206ENST00000487204 LARP6Q9BRS8 491 aaKnown RBP8.42□□□□□ -1.06
CCNB3-206ENST00000487204 SYT17Q9BSW7 474 aa8.42□□□□□ -1.06
CCNB3-206ENST00000487204 TNKSO95271 1327 aa8.42□□□□□ -1.06
CCNB3-206ENST00000487204 NID2Q14112 1375 aa8.42□□□□□ -1.06
CCNB3-206ENST00000487204 LAMB1P07942 1786 aa8.42□□□□□ -1.06
CCNB3-206ENST00000487204 PSME4Q14997 1843 aa8.42□□□□□ -1.06
CCNB3-206ENST00000487204 ATRNL1Q5VV63 1379 aa8.41□□□□□ -1.06
CCNB3-206ENST00000487204 CYP2D7A0A087X1C5 515 aa8.41□□□□□ -1.06
CCNB3-206ENST00000487204 GOLGA8AA7E2F4 631 aa8.41□□□□□ -1.06
CCNB3-206ENST00000487204 DDX11L8A8MPP1 907 aa8.41□□□□□ -1.06
CCNB3-206ENST00000487204 STX6O43752 255 aa8.41□□□□□ -1.06
CCNB3-206ENST00000487204 LARGE1O95461 756 aa8.41□□□□□ -1.06
CCNB3-206ENST00000487204 BRD1O95696 1058 aa8.41□□□□□ -1.06
CCNB3-206ENST00000487204 KIF5BP33176 963 aa8.41□□□□□ -1.06
CCNB3-206ENST00000487204 GNAQP50148 359 aa8.41□□□□□ -1.06
CCNB3-206ENST00000487204 PLCD1P51178 756 aa8.41□□□□□ -1.06
CCNB3-206ENST00000487204 ZNF280AP59817 542 aaPredicted RBP8.41□□□□□ -1.06
CCNB3-206ENST00000487204 TFAP4Q01664 338 aa8.41□□□□□ -1.06
CCNB3-206ENST00000487204 GABPAQ06546 454 aa8.41□□□□□ -1.06
CCNB3-206ENST00000487204 SEC23AQ15436 765 aa8.41□□□□□ -1.06
CCNB3-206ENST00000487204 LARP1BQ659C4 914 aaKnown RBP8.41□□□□□ -1.06
CCNB3-206ENST00000487204 FAM83AQ86UY5 434 aa8.41□□□□□ -1.06
CCNB3-206ENST00000487204 CRACR2BQ8N4Y2 399 aaPredicted RBP8.41□□□□□ -1.06
CCNB3-206ENST00000487204 NEDD1Q8NHV4 660 aa8.41□□□□□ -1.06
CCNB3-206ENST00000487204 KAT14Q9H8E8 782 aa8.41□□□□□ -1.06
CCNB3-206ENST00000487204 RBM27Q9P2N5 1060 aaKnown RBP8.41□□□□□ -1.06
CCNB3-206ENST00000487204 SAP30BPQ9UHR5 308 aaKnown RBP8.41□□□□□ -1.06
CCNB3-206ENST00000487204 HERC5Q9UII4 1024 aaKnown RBP8.41□□□□□ -1.06
CCNB3-206ENST00000487204 BRPF3Q9ULD4 1205 aa8.41□□□□□ -1.06
CCNB3-206ENST00000487204 NAV1Q8NEY1 1877 aa8.4□□□□□ -1.06
CCNB3-206ENST00000487204 PLIN4Q96Q06 1357 aa8.4□□□□□ -1.06
CCNB3-206ENST00000487204 PTPDC1A2A3K4 754 aa8.4□□□□□ -1.06
CCNB3-206ENST00000487204 H7C1D1 291 aa8.4□□□□□ -1.06
CCNB3-206ENST00000487204 PRDM1O75626 825 aa8.4□□□□□ -1.06
CCNB3-206ENST00000487204 GABBR2O75899 941 aa8.4□□□□□ -1.06
CCNB3-206ENST00000487204 CYP2D6P10635 497 aa8.4□□□□□ -1.06
CCNB3-206ENST00000487204 RASA1P20936 1047 aa8.4□□□□□ -1.06
CCNB3-206ENST00000487204 SYT1P21579 422 aa8.4□□□□□ -1.06
CCNB3-206ENST00000487204 CCT2P78371 535 aaKnown RBP8.4□□□□□ -1.06
CCNB3-206ENST00000487204 RTN1Q16799 776 aa8.4□□□□□ -1.06
CCNB3-206ENST00000487204 CSPP1Q1MSJ5 1256 aa8.4□□□□□ -1.06
CCNB3-206ENST00000487204 ILDR2Q71H61 639 aa8.4□□□□□ -1.06
CCNB3-206ENST00000487204 MICU3Q86XE3 530 aa8.4□□□□□ -1.06
CCNB3-206ENST00000487204 ZSCAN29Q8IWY8 852 aaPredicted RBP8.4□□□□□ -1.06
CCNB3-206ENST00000487204 TRIM22Q8IYM9 498 aa8.4□□□□□ -1.06
CCNB3-206ENST00000487204 ZNF654Q8IZM8 581 aa8.4□□□□□ -1.06
CCNB3-206ENST00000487204 GPC2Q8N158 579 aa8.4□□□□□ -1.06
CCNB3-206ENST00000487204 STK11IPQ8N1F8 1099 aa8.4□□□□□ -1.06
CCNB3-206ENST00000487204 ENAHQ8N8S7 591 aaPredicted RBP8.4□□□□□ -1.06
CCNB3-206ENST00000487204 FANCBQ8NB91 859 aa8.4□□□□□ -1.06
CCNB3-206ENST00000487204 NSUN7Q8NE18 718 aaKnown RBP8.4□□□□□ -1.06
CCNB3-206ENST00000487204 CTCFLQ8NI51 663 aaPredicted RBP8.4□□□□□ -1.06
CCNB3-206ENST00000487204 FAM151AQ8WW52 585 aa8.4□□□□□ -1.06
CCNB3-206ENST00000487204 TNPO1Q92973 898 aaKnown RBP8.4□□□□□ -1.06
CCNB3-206ENST00000487204 HOOK2Q96ED9 719 aa8.4□□□□□ -1.06
CCNB3-206ENST00000487204 PRMT6Q96LA8 375 aaPredicted RBP8.4□□□□□ -1.06
CCNB3-206ENST00000487204 LZTS2Q9BRK4 669 aa8.4□□□□□ -1.06
CCNB3-206ENST00000487204 TDRD3Q9H7E2 651 aaKnown RBP8.4□□□□□ -1.06
CCNB3-206ENST00000487204 MYOZ2Q9NPC6 264 aa8.4□□□□□ -1.06
CCNB3-206ENST00000487204 DDX4Q9NQI0 724 aaKnown RBP8.4□□□□□ -1.06
CCNB3-206ENST00000487204 INCENPQ9NQS7 918 aa8.4□□□□□ -1.06
CCNB3-206ENST00000487204 ZNF70Q9UC06 446 aaPredicted RBP8.4□□□□□ -1.06
CCNB3-206ENST00000487204 HPS5Q9UPZ3 1129 aa8.4□□□□□ -1.06
CCNB3-206ENST00000487204 SCN9AQ15858 1988 aa8.4□□□□□ -1.06
CCNB3-206ENST00000487204 STK36Q9NRP7 1315 aa8.39□□□□□ -1.07
CCNB3-206ENST00000487204 ZC3H4Q9UPT8 1303 aaKnown RBP8.39□□□□□ -1.07
CCNB3-206ENST00000487204 FOCADQ5VW36 1801 aa8.39□□□□□ -1.07
CCNB3-206ENST00000487204 H3BQV1 296 aa8.39□□□□□ -1.07
CCNB3-206ENST00000487204 GRIN3BO60391 1043 aa8.39□□□□□ -1.07
CCNB3-206ENST00000487204 ZSCAN22P10073 491 aaPredicted RBP8.39□□□□□ -1.07
CCNB3-206ENST00000487204 IFNAR1P17181 557 aa8.39□□□□□ -1.07
CCNB3-206ENST00000487204 XBP1P17861 261 aa8.39□□□□□ -1.07
CCNB3-206ENST00000487204 AKAP17AQ02040 695 aaKnown RBP8.39□□□□□ -1.07
CCNB3-206ENST00000487204 RASSF7Q02833 373 aa8.39□□□□□ -1.07
CCNB3-206ENST00000487204 SSRP1Q08945 709 aaKnown RBP8.39□□□□□ -1.07
CCNB3-206ENST00000487204 ST3GAL1Q11201 340 aa8.39□□□□□ -1.07
CCNB3-206ENST00000487204 COL9A3Q14050 684 aaPredicted RBP8.39□□□□□ -1.07
CCNB3-206ENST00000487204 NFKBIBQ15653 356 aa8.39□□□□□ -1.07
CCNB3-206ENST00000487204 FAM47AQ5JRC9 791 aa8.39□□□□□ -1.07
CCNB3-206ENST00000487204 IFFO2Q5TF58 517 aa8.39□□□□□ -1.07
CCNB3-206ENST00000487204 METTL16Q86W50 562 aaKnown RBP8.39□□□□□ -1.07
CCNB3-206ENST00000487204 DYNLL2Q96FJ2 89 aa8.39□□□□□ -1.07
CCNB3-206ENST00000487204 ZBED3Q96IU2 234 aaPredicted RBP8.39□□□□□ -1.07
CCNB3-206ENST00000487204 ZKSCAN3Q9BRR0 538 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms