RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 HAUS7Q99871 368 aa23.13■■□□□ 1.29
CLIP2-206ENST00000487091 TMEM106CQ9BVX2 250 aa23.13■■□□□ 1.29
CLIP2-206ENST00000487091 ZBTB21Q9ULJ3 1066 aa23.13■■□□□ 1.29
CLIP2-206ENST00000487091 MGAMO43451 1857 aa23.13■■□□□ 1.29
CLIP2-206ENST00000487091 C19orf81C9J6K1 198 aa23.12■■□□□ 1.29
CLIP2-206ENST00000487091 ECM2O94769 699 aaPredicted RBP23.12■■□□□ 1.29
CLIP2-206ENST00000487091 BACE1P56817 501 aa23.12■■□□□ 1.29
CLIP2-206ENST00000487091 EDC3Q96F86 508 aaKnown RBP23.12■■□□□ 1.29
CLIP2-206ENST00000487091 CRNKL1Q9BZJ0 848 aaKnown RBP23.12■■□□□ 1.29
CLIP2-206ENST00000487091 DCTPP1Q9H773 170 aa23.12■■□□□ 1.29
CLIP2-206ENST00000487091 MYPNQ86TC9 1320 aa23.11■■□□□ 1.29
CLIP2-206ENST00000487091 GDF11O95390 407 aa23.11■■□□□ 1.29
CLIP2-206ENST00000487091 SLC4A8Q2Y0W8 1093 aa23.11■■□□□ 1.29
CLIP2-206ENST00000487091 USP17L10C9JJH3 530 aa23.1■■□□□ 1.29
CLIP2-206ENST00000487091 SMARCA5O60264 1052 aaPredicted RBP23.1■■□□□ 1.29
CLIP2-206ENST00000487091 GCLCP48506 637 aaPredicted RBP23.1■■□□□ 1.29
CLIP2-206ENST00000487091 MTMR2Q13614 643 aa23.1■■□□□ 1.29
CLIP2-206ENST00000487091 FAM110CQ1W6H9 321 aa23.1■■□□□ 1.29
CLIP2-206ENST00000487091 RAET1EQ8TD07 263 aa23.1■■□□□ 1.29
CLIP2-206ENST00000487091 SH3TC2Q8TF17 1288 aa23.1■■□□□ 1.29
CLIP2-206ENST00000487091 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.1■■□□□ 1.29
CLIP2-206ENST00000487091 TMOD4Q9NZQ9 345 aa23.1■■□□□ 1.29
CLIP2-206ENST00000487091 ADD2P35612 726 aa23.09■■□□□ 1.29
CLIP2-206ENST00000487091 SHROOM1Q2M3G4 852 aaPredicted RBP23.09■■□□□ 1.29
CLIP2-206ENST00000487091 ANKRD13CQ8N6S4 541 aa23.09■■□□□ 1.29
CLIP2-206ENST00000487091 ASCC2Q9H1I8 757 aaPredicted RBP23.09■■□□□ 1.29
CLIP2-206ENST00000487091 GH2P01242 217 aa23.08■■□□□ 1.29
CLIP2-206ENST00000487091 POLR3DP05423 398 aaPredicted RBP23.08■■□□□ 1.29
CLIP2-206ENST00000487091 EN2P19622 333 aaPredicted RBP23.08■■□□□ 1.29
CLIP2-206ENST00000487091 HOXA7P31268 230 aaPredicted RBP23.08■■□□□ 1.29
CLIP2-206ENST00000487091 GRK4P32298 578 aa23.08■■□□□ 1.29
CLIP2-206ENST00000487091 PLCD1P51178 756 aa23.08■■□□□ 1.29
CLIP2-206ENST00000487091 CERKLQ49MI3 558 aaPredicted RBP23.08■■□□□ 1.29
CLIP2-206ENST00000487091 DDX60LQ5H9U9 1706 aaKnown RBP23.08■■□□□ 1.28
CLIP2-206ENST00000487091 PRKCZQ05513 592 aa23.07■■□□□ 1.28
CLIP2-206ENST00000487091 GABPAQ06546 454 aa23.07■■□□□ 1.28
CLIP2-206ENST00000487091 UBE3CQ15386 1083 aa23.07■■□□□ 1.28
CLIP2-206ENST00000487091 LCORLQ8N3X6 602 aa23.07■■□□□ 1.28
CLIP2-206ENST00000487091 DCP1AQ9NPI6 582 aaPredicted RBP23.07■■□□□ 1.28
CLIP2-206ENST00000487091 ECHDC1Q9NTX5 307 aa23.07■■□□□ 1.28
CLIP2-206ENST00000487091 MCM9Q9NXL9 1143 aa23.07■■□□□ 1.28
CLIP2-206ENST00000487091 NAV1Q8NEY1 1877 aa23.07■■□□□ 1.28
CLIP2-206ENST00000487091 TNPO2O14787 897 aaKnown RBP23.06■■□□□ 1.28
CLIP2-206ENST00000487091 SHMT1P34896 483 aa23.06■■□□□ 1.28
CLIP2-206ENST00000487091 TAOK2Q9UL54 1235 aa23.06■■□□□ 1.28
CLIP2-206ENST00000487091 GABRQQ9UN88 632 aa23.06■■□□□ 1.28
CLIP2-206ENST00000487091 DOCK3Q8IZD9 2030 aa23.06■■□□□ 1.28
CLIP2-206ENST00000487091 RRP1P56182 461 aaKnown RBP23.05■■□□□ 1.28
CLIP2-206ENST00000487091 IRX3P78415 501 aaPredicted RBP23.05■■□□□ 1.28
CLIP2-206ENST00000487091 ABCB5Q2M3G0 1257 aa23.05■■□□□ 1.28
CLIP2-206ENST00000487091 ZSCAN25Q6NSZ9 544 aa23.05■■□□□ 1.28
CLIP2-206ENST00000487091 USP17L2Q6R6M4 530 aa23.05■■□□□ 1.28
CLIP2-206ENST00000487091 SLAIN1Q8ND83 568 aa23.05■■□□□ 1.28
CLIP2-206ENST00000487091 SDR42E1Q8WUS8 393 aa23.05■■□□□ 1.28
CLIP2-206ENST00000487091 CABP5Q9NP86 173 aa23.05■■□□□ 1.28
CLIP2-206ENST00000487091 ATP8A2Q9NTI2 1148 aa23.05■■□□□ 1.28
CLIP2-206ENST00000487091 MYH7P12883 1935 aa23.05■■□□□ 1.28
CLIP2-206ENST00000487091 BRCA2P51587 3418 aa23.04■■□□□ 1.28
CLIP2-206ENST00000487091 MBD4O95243 580 aa23.04■■□□□ 1.28
CLIP2-206ENST00000487091 IRF5Q13568 498 aa23.04■■□□□ 1.28
CLIP2-206ENST00000487091 COA7Q96BR5 231 aa23.04■■□□□ 1.28
CLIP2-206ENST00000487091 GPATCH3Q96I76 525 aa23.04■■□□□ 1.28
CLIP2-206ENST00000487091 ARMT1Q9H993 441 aa23.04■■□□□ 1.28
CLIP2-206ENST00000487091 EMILIN3Q9NT22 766 aa23.04■■□□□ 1.28
CLIP2-206ENST00000487091 MORF4L1Q9UBU8 362 aa23.04■■□□□ 1.28
CLIP2-206ENST00000487091 PCDHB15Q9Y5E8 787 aa23.04■■□□□ 1.28
CLIP2-206ENST00000487091 MYCP01106 439 aaPredicted RBP23.03■■□□□ 1.28
CLIP2-206ENST00000487091 FLT3LGP49771 235 aa23.03■■□□□ 1.28
CLIP2-206ENST00000487091 SLFNL1Q499Z3 407 aa23.03■■□□□ 1.28
CLIP2-206ENST00000487091 PRPF38BQ5VTL8 546 aaKnown RBP23.03■■□□□ 1.28
CLIP2-206ENST00000487091 C12orf42Q96LP6 360 aa23.03■■□□□ 1.28
CLIP2-206ENST00000487091 MKI67P46013 3256 aaKnown RBP23.03■■□□□ 1.28
CLIP2-206ENST00000487091 UBXN2AP68543 259 aa23.02■■□□□ 1.28
CLIP2-206ENST00000487091 RAB3GAP1Q15042 981 aa23.02■■□□□ 1.28
CLIP2-206ENST00000487091 PXYLP1Q8TE99 480 aa23.02■■□□□ 1.28
CLIP2-206ENST00000487091 P2RX7Q99572 595 aaKnown RBP23.02■■□□□ 1.28
CLIP2-206ENST00000487091 ADCY3O60266 1144 aa23.01■■□□□ 1.27
CLIP2-206ENST00000487091 USP14P54578 494 aa23.01■■□□□ 1.27
CLIP2-206ENST00000487091 HERVK_113P62684 666 aa23.01■■□□□ 1.27
CLIP2-206ENST00000487091 MTFR1Q15390 333 aa23.01■■□□□ 1.27
CLIP2-206ENST00000487091 GTF3C2Q8WUA4 911 aaPredicted RBP23.01■■□□□ 1.27
CLIP2-206ENST00000487091 FEZ1Q99689 392 aa23.01■■□□□ 1.27
CLIP2-206ENST00000487091 KIAA1683Q9H0B3 1180 aa23.01■■□□□ 1.27
CLIP2-206ENST00000487091 BIN2Q9UBW5 565 aaPredicted RBP23.01■■□□□ 1.27
CLIP2-206ENST00000487091 SWAP70Q9UH65 585 aa23.01■■□□□ 1.27
CLIP2-206ENST00000487091 PRKAB2O43741 272 aa23■■□□□ 1.27
CLIP2-206ENST00000487091 GUCY1A2P33402 732 aa23■■□□□ 1.27
CLIP2-206ENST00000487091 CHGBP05060 677 aa22.99■■□□□ 1.27
CLIP2-206ENST00000487091 EVX2Q03828 476 aa22.99■■□□□ 1.27
CLIP2-206ENST00000487091 KBTBD3Q8NAB2 608 aa22.99■■□□□ 1.27
CLIP2-206ENST00000487091 NKX2-3Q8TAU0 364 aa22.99■■□□□ 1.27
CLIP2-206ENST00000487091 DDRGK1Q96HY6 314 aa22.99■■□□□ 1.27
CLIP2-206ENST00000487091 BAZ2AQ9UIF9 1905 aaKnown RBP22.98■■□□□ 1.27
CLIP2-206ENST00000487091 USP17L15C9J2P7 530 aa22.98■■□□□ 1.27
CLIP2-206ENST00000487091 USP17L13C9JLJ4 530 aa22.98■■□□□ 1.27
CLIP2-206ENST00000487091 USP17L11C9JVI0 530 aa22.98■■□□□ 1.27
CLIP2-206ENST00000487091 USP17L18D6R9N7 530 aa22.98■■□□□ 1.27
CLIP2-206ENST00000487091 USP17L22D6RA61 530 aa22.98■■□□□ 1.27
CLIP2-206ENST00000487091 USP17L17D6RBQ6 530 aa22.98■■□□□ 1.27
CLIP2-206ENST00000487091 USP17L19D6RCP7 530 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms