RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 DBNDD1Q9H9R9 158 aa13.52□□□□□ -0.25
PRKCB-207ENST00000486868 PIM2Q9P1W9 311 aa13.52□□□□□ -0.25
PRKCB-207ENST00000486868 CHD4Q14839 1912 aa13.51□□□□□ -0.25
PRKCB-207ENST00000486868 LAMB1P07942 1786 aa13.51□□□□□ -0.25
PRKCB-207ENST00000486868 DLEC1Q9Y238 1755 aa13.51□□□□□ -0.25
PRKCB-207ENST00000486868 PLIN4Q96Q06 1357 aa13.51□□□□□ -0.25
PRKCB-207ENST00000486868 GOLGA6L3A6NEY3 463 aa13.51□□□□□ -0.25
PRKCB-207ENST00000486868 SMIM22K7EJ46 135 aa13.51□□□□□ -0.25
PRKCB-207ENST00000486868 PPIP5K2O43314 1243 aa13.51□□□□□ -0.25
PRKCB-207ENST00000486868 FIBPO43427 364 aa13.51□□□□□ -0.25
PRKCB-207ENST00000486868 C21orf2O43822 256 aa13.51□□□□□ -0.25
PRKCB-207ENST00000486868 PRDM1O75626 825 aa13.51□□□□□ -0.25
PRKCB-207ENST00000486868 PLCD1P51178 756 aa13.51□□□□□ -0.25
PRKCB-207ENST00000486868 TFAP4Q01664 338 aa13.51□□□□□ -0.25
PRKCB-207ENST00000486868 FUT2Q10981 343 aa13.51□□□□□ -0.25
PRKCB-207ENST00000486868 TRIM29Q14134 588 aa13.51□□□□□ -0.25
PRKCB-207ENST00000486868 RCSD1Q6JBY9 416 aa13.51□□□□□ -0.25
PRKCB-207ENST00000486868 LEO1Q8WVC0 666 aaPredicted RBP13.51□□□□□ -0.25
PRKCB-207ENST00000486868 CHAMP1Q96JM3 812 aa13.51□□□□□ -0.25
PRKCB-207ENST00000486868 SPATA32Q96LK8 384 aa13.51□□□□□ -0.25
PRKCB-207ENST00000486868 DHX36Q9H2U1 1008 aaKnown RBP13.51□□□□□ -0.25
PRKCB-207ENST00000486868 USP40Q9NVE5 1235 aa13.51□□□□□ -0.25
PRKCB-207ENST00000486868 CD2APQ9Y5K6 639 aa13.51□□□□□ -0.25
PRKCB-207ENST00000486868 MYH2Q9UKX2 1941 aa13.51□□□□□ -0.25
PRKCB-207ENST00000486868 YEATS4O95619 227 aa13.5□□□□□ -0.25
PRKCB-207ENST00000486868 VIL1P09327 827 aaKnown RBP13.5□□□□□ -0.25
PRKCB-207ENST00000486868 TSPY3P0CV98 308 aa13.5□□□□□ -0.25
PRKCB-207ENST00000486868 TSPY8P0CW00 308 aa13.5□□□□□ -0.25
PRKCB-207ENST00000486868 XBP1P17861 261 aa13.5□□□□□ -0.25
PRKCB-207ENST00000486868 U2AF2P26368 475 aaKnown RBP eCLIP13.5□□□□□ -0.25
PRKCB-207ENST00000486868 SMARCA1P28370 1054 aa13.5□□□□□ -0.25
PRKCB-207ENST00000486868 AKAP17AQ02040 695 aaKnown RBP13.5□□□□□ -0.25
PRKCB-207ENST00000486868 KIF23Q02241 960 aaPredicted RBP13.5□□□□□ -0.25
PRKCB-207ENST00000486868 AOC3Q16853 763 aa13.5□□□□□ -0.25
PRKCB-207ENST00000486868 CAVIN1Q6NZI2 390 aaKnown RBP13.5□□□□□ -0.25
PRKCB-207ENST00000486868 CDC42EP5Q6NZY7 148 aa13.5□□□□□ -0.25
PRKCB-207ENST00000486868 TMTC3Q6ZXV5 915 aa13.5□□□□□ -0.25
PRKCB-207ENST00000486868 CTCFLQ8NI51 663 aaPredicted RBP13.5□□□□□ -0.25
PRKCB-207ENST00000486868 FBXW7Q969H0 707 aa13.5□□□□□ -0.25
PRKCB-207ENST00000486868 LZTS2Q9BRK4 669 aa13.5□□□□□ -0.25
PRKCB-207ENST00000486868 SLC26A6Q9BXS9 759 aa13.5□□□□□ -0.25
PRKCB-207ENST00000486868 OSBPL5Q9H0X9 879 aaPredicted RBP13.5□□□□□ -0.25
PRKCB-207ENST00000486868 RTEL1Q9NZ71 1219 aa13.5□□□□□ -0.25
PRKCB-207ENST00000486868 MORC2Q9Y6X9 1032 aaPredicted RBP13.5□□□□□ -0.25
PRKCB-207ENST00000486868 KIF13BQ9NQT8 1826 aa13.5□□□□□ -0.25
PRKCB-207ENST00000486868 GADD45BO75293 160 aaPredicted RBP13.49□□□□□ -0.25
PRKCB-207ENST00000486868 HLA-DOAP06340 250 aa13.49□□□□□ -0.25
PRKCB-207ENST00000486868 RXRAP19793 462 aa13.49□□□□□ -0.25
PRKCB-207ENST00000486868 MRE11P49959 708 aa13.49□□□□□ -0.25
PRKCB-207ENST00000486868 SAFBQ15424 915 aaKnown RBP eCLIP13.49□□□□□ -0.25
PRKCB-207ENST00000486868 ZSCAN23Q3MJ62 389 aa13.49□□□□□ -0.25
PRKCB-207ENST00000486868 FAM47AQ5JRC9 791 aa13.49□□□□□ -0.25
PRKCB-207ENST00000486868 CCDC183Q5T5S1 534 aa13.49□□□□□ -0.25
PRKCB-207ENST00000486868 KRT40Q6A162 431 aa13.49□□□□□ -0.25
PRKCB-207ENST00000486868 NUP133Q8WUM0 1156 aa13.49□□□□□ -0.25
PRKCB-207ENST00000486868 DYNLL2Q96FJ2 89 aa13.49□□□□□ -0.25
PRKCB-207ENST00000486868 CCDC17Q96LX7 622 aa13.49□□□□□ -0.25
PRKCB-207ENST00000486868 MYL10Q9BUA6 226 aa13.49□□□□□ -0.25
PRKCB-207ENST00000486868 GZF1Q9H116 711 aaPredicted RBP13.49□□□□□ -0.25
PRKCB-207ENST00000486868 FOXP1Q9H334 677 aaPredicted RBP13.49□□□□□ -0.25
PRKCB-207ENST00000486868 KAT14Q9H8E8 782 aa13.49□□□□□ -0.25
PRKCB-207ENST00000486868 GDPD2Q9HCC8 539 aa13.49□□□□□ -0.25
PRKCB-207ENST00000486868 IL17RBQ9NRM6 502 aa13.49□□□□□ -0.25
PRKCB-207ENST00000486868 POLR3EQ9NVU0 708 aa13.49□□□□□ -0.25
PRKCB-207ENST00000486868 TMEM63CQ9P1W3 806 aa13.49□□□□□ -0.25
PRKCB-207ENST00000486868 DDX60LQ5H9U9 1706 aaKnown RBP13.49□□□□□ -0.25
PRKCB-207ENST00000486868 COL2A1P02458 1487 aaPredicted RBP13.48□□□□□ -0.25
PRKCB-207ENST00000486868 ENTPD3O75355 529 aa13.48□□□□□ -0.25
PRKCB-207ENST00000486868 NASPP49321 788 aaPredicted RBP13.48□□□□□ -0.25
PRKCB-207ENST00000486868 GRM4Q14833 912 aa13.48□□□□□ -0.25
PRKCB-207ENST00000486868 FOXD4L6Q3SYB3 417 aaPredicted RBP13.48□□□□□ -0.25
PRKCB-207ENST00000486868 MYSM1Q5VVJ2 828 aa13.48□□□□□ -0.25
PRKCB-207ENST00000486868 RSBN1LQ6PCB5 846 aaPredicted RBP13.48□□□□□ -0.25
PRKCB-207ENST00000486868 FOXD4L3Q6VB84 417 aaPredicted RBP13.48□□□□□ -0.25
PRKCB-207ENST00000486868 METTL16Q86W50 562 aaKnown RBP13.48□□□□□ -0.25
PRKCB-207ENST00000486868 RAB11FIP4Q86YS3 637 aa13.48□□□□□ -0.25
PRKCB-207ENST00000486868 STK11IPQ8N1F8 1099 aa13.48□□□□□ -0.25
PRKCB-207ENST00000486868 PHKBQ93100 1093 aa13.48□□□□□ -0.25
PRKCB-207ENST00000486868 GMLQ99445 158 aa13.48□□□□□ -0.25
PRKCB-207ENST00000486868 SGIP1Q9BQI5 828 aa13.48□□□□□ -0.25
PRKCB-207ENST00000486868 SERPINB13Q9UIV8 391 aa13.48□□□□□ -0.25
PRKCB-207ENST00000486868 BAZ2AQ9UIF9 1905 aaKnown RBP13.47□□□□□ -0.25
PRKCB-207ENST00000486868 GOLGA6L4A6NEF3 574 aa13.47□□□□□ -0.25
PRKCB-207ENST00000486868 YDJCA8MPS7 323 aa13.47□□□□□ -0.25
PRKCB-207ENST00000486868 F8W031 263 aaPredicted RBP13.47□□□□□ -0.25
PRKCB-207ENST00000486868 DTNBO60941 627 aa13.47□□□□□ -0.25
PRKCB-207ENST00000486868 MMP1P03956 469 aa13.47□□□□□ -0.25
PRKCB-207ENST00000486868 TOP1P11387 765 aaKnown RBP13.47□□□□□ -0.25
PRKCB-207ENST00000486868 SCNN1DP51172 638 aa13.47□□□□□ -0.25
PRKCB-207ENST00000486868 EVX2Q03828 476 aa13.47□□□□□ -0.25
PRKCB-207ENST00000486868 DALRD3Q5D0E6 543 aaKnown RBP13.47□□□□□ -0.25
PRKCB-207ENST00000486868 FOXP4Q8IVH2 680 aaPredicted RBP13.47□□□□□ -0.25
PRKCB-207ENST00000486868 CCDC144CPQ8IYA2 1237 aa13.47□□□□□ -0.25
PRKCB-207ENST00000486868 MTMR14Q8NCE2 650 aa13.47□□□□□ -0.25
PRKCB-207ENST00000486868 PNMA1Q8ND90 353 aa13.47□□□□□ -0.25
PRKCB-207ENST00000486868 AGBL3Q8NEM8 1001 aa13.47□□□□□ -0.25
PRKCB-207ENST00000486868 KCNG4Q8TDN1 519 aa13.47□□□□□ -0.25
PRKCB-207ENST00000486868 DDX4Q9NQI0 724 aaKnown RBP13.47□□□□□ -0.25
PRKCB-207ENST00000486868 DDX19AQ9NUU7 478 aaKnown RBP13.47□□□□□ -0.25
PRKCB-207ENST00000486868 SAP30BPQ9UHR5 308 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms