RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 EXOSC10Q01780 885 aaKnown RBP11.31□□□□□ -0.6
MCF2L-227ENST00000486806 RABEP1Q15276 862 aa11.31□□□□□ -0.6
MCF2L-227ENST00000486806 RRP12Q5JTH9 1297 aaKnown RBP11.31□□□□□ -0.6
MCF2L-227ENST00000486806 BLOC1S2Q6QNY1 142 aa11.31□□□□□ -0.6
MCF2L-227ENST00000486806 RUFY3Q7L099 469 aa11.31□□□□□ -0.6
MCF2L-227ENST00000486806 CYB5R4Q7L1T6 521 aa11.31□□□□□ -0.6
MCF2L-227ENST00000486806 DHX32Q7L7V1 743 aaKnown RBP11.31□□□□□ -0.6
MCF2L-227ENST00000486806 TTC14Q96N46 770 aa11.31□□□□□ -0.6
MCF2L-227ENST00000486806 MTA3Q9BTC8 594 aa11.31□□□□□ -0.6
MCF2L-227ENST00000486806 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.31□□□□□ -0.6
MCF2L-227ENST00000486806 TRIM34Q9BYJ4 488 aa11.31□□□□□ -0.6
MCF2L-227ENST00000486806 ZNF341Q9BYN7 854 aa11.31□□□□□ -0.6
MCF2L-227ENST00000486806 TOMM22Q9NS69 142 aa11.31□□□□□ -0.6
MCF2L-227ENST00000486806 ZSWIM5Q9P217 1185 aa11.31□□□□□ -0.6
MCF2L-227ENST00000486806 TSPY2A6NKD2 308 aa11.3□□□□□ -0.6
MCF2L-227ENST00000486806 RANBP6O60518 1105 aaKnown RBP11.3□□□□□ -0.6
MCF2L-227ENST00000486806 MCM5P33992 734 aa11.3□□□□□ -0.6
MCF2L-227ENST00000486806 NOVP48745 357 aa11.3□□□□□ -0.6
MCF2L-227ENST00000486806 JAG1P78504 1218 aa11.3□□□□□ -0.6
MCF2L-227ENST00000486806 MAP3K11Q16584 847 aa11.3□□□□□ -0.6
MCF2L-227ENST00000486806 SHROOM1Q2M3G4 852 aaPredicted RBP11.3□□□□□ -0.6
MCF2L-227ENST00000486806 CERKLQ49MI3 558 aaPredicted RBP11.3□□□□□ -0.6
MCF2L-227ENST00000486806 FAM47AQ5JRC9 791 aa11.3□□□□□ -0.6
MCF2L-227ENST00000486806 FBXL16Q8N461 479 aa11.3□□□□□ -0.6
MCF2L-227ENST00000486806 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.3□□□□□ -0.6
MCF2L-227ENST00000486806 NEDD1Q8NHV4 660 aa11.3□□□□□ -0.6
MCF2L-227ENST00000486806 KLRG1Q96E93 195 aa11.3□□□□□ -0.6
MCF2L-227ENST00000486806 CCDC17Q96LX7 622 aa11.3□□□□□ -0.6
MCF2L-227ENST00000486806 AGXT2Q9BYV1 514 aa11.3□□□□□ -0.6
MCF2L-227ENST00000486806 TCP11L1Q9NUJ3 509 aa11.3□□□□□ -0.6
MCF2L-227ENST00000486806 CYP46A1Q9Y6A2 500 aa11.3□□□□□ -0.6
MCF2L-227ENST00000486806 PASKQ96RG2 1323 aa11.3□□□□□ -0.6
MCF2L-227ENST00000486806 PRC1O43663 620 aa11.29□□□□□ -0.6
MCF2L-227ENST00000486806 USP2O75604 605 aaPredicted RBP11.29□□□□□ -0.6
MCF2L-227ENST00000486806 GDF11O95390 407 aa11.29□□□□□ -0.6
MCF2L-227ENST00000486806 TSPY3P0CV98 308 aa11.29□□□□□ -0.6
MCF2L-227ENST00000486806 TSPY8P0CW00 308 aa11.29□□□□□ -0.6
MCF2L-227ENST00000486806 GUCY1A2P33402 732 aa11.29□□□□□ -0.6
MCF2L-227ENST00000486806 NF2P35240 595 aa11.29□□□□□ -0.6
MCF2L-227ENST00000486806 CAP2P40123 477 aa11.29□□□□□ -0.6
MCF2L-227ENST00000486806 TFAP4Q01664 338 aa11.29□□□□□ -0.6
MCF2L-227ENST00000486806 FMR1Q06787 632 aaKnown RBP eCLIP11.29□□□□□ -0.6
MCF2L-227ENST00000486806 NOL9Q5SY16 702 aaKnown RBP11.29□□□□□ -0.6
MCF2L-227ENST00000486806 TMEM179Q6ZVK1 233 aa11.29□□□□□ -0.6
MCF2L-227ENST00000486806 CHST3Q7LGC8 479 aa11.29□□□□□ -0.6
MCF2L-227ENST00000486806 ZNF444Q8N0Y2 327 aaPredicted RBP11.29□□□□□ -0.6
MCF2L-227ENST00000486806 IL27Q8NEV9 243 aa11.29□□□□□ -0.6
MCF2L-227ENST00000486806 RBM46Q8TBY0 533 aaKnown RBP11.29□□□□□ -0.6
MCF2L-227ENST00000486806 TCEANC2Q96MN5 208 aa11.29□□□□□ -0.6
MCF2L-227ENST00000486806 WRNIP1Q96S55 665 aa11.29□□□□□ -0.6
MCF2L-227ENST00000486806 TSHZ2Q9NRE2 1034 aa11.29□□□□□ -0.6
MCF2L-227ENST00000486806 IL17RBQ9NRM6 502 aa11.29□□□□□ -0.6
MCF2L-227ENST00000486806 ZBTB21Q9ULJ3 1066 aa11.29□□□□□ -0.6
MCF2L-227ENST00000486806 FZD1Q9UP38 647 aa11.29□□□□□ -0.6
MCF2L-227ENST00000486806 TNKSO95271 1327 aa11.29□□□□□ -0.6
MCF2L-227ENST00000486806 SH2B2O14492 632 aaPredicted RBP11.28□□□□□ -0.6
MCF2L-227ENST00000486806 NMT2O60551 498 aa11.28□□□□□ -0.6
MCF2L-227ENST00000486806 CTNND1O60716 968 aaKnown RBP11.28□□□□□ -0.6
MCF2L-227ENST00000486806 GH2P01242 217 aa11.28□□□□□ -0.6
MCF2L-227ENST00000486806 INPP5BP32019 993 aa11.28□□□□□ -0.6
MCF2L-227ENST00000486806 SEC23AQ15436 765 aa11.28□□□□□ -0.6
MCF2L-227ENST00000486806 ABCB5Q2M3G0 1257 aa11.28□□□□□ -0.6
MCF2L-227ENST00000486806 IQCA1Q86XH1 822 aa11.28□□□□□ -0.6
MCF2L-227ENST00000486806 ENAHQ8N8S7 591 aaPredicted RBP11.28□□□□□ -0.6
MCF2L-227ENST00000486806 SMC1BQ8NDV3 1235 aa11.28□□□□□ -0.6
MCF2L-227ENST00000486806 IGDCC4Q8TDY8 1250 aa11.28□□□□□ -0.6
MCF2L-227ENST00000486806 CEP95Q96GE4 821 aa11.28□□□□□ -0.6
MCF2L-227ENST00000486806 TMEM87BQ96K49 555 aa11.28□□□□□ -0.6
MCF2L-227ENST00000486806 ZSCAN10Q96SZ4 725 aaPredicted RBP11.28□□□□□ -0.6
MCF2L-227ENST00000486806 LRRC2Q9BYS8 371 aa11.28□□□□□ -0.6
MCF2L-227ENST00000486806 ALDH8A1Q9H2A2 487 aaPredicted RBP11.28□□□□□ -0.6
MCF2L-227ENST00000486806 LY9Q9HBG7 655 aa11.28□□□□□ -0.6
MCF2L-227ENST00000486806 GINM1Q9NU53 330 aa11.28□□□□□ -0.6
MCF2L-227ENST00000486806 OTOFQ9HC10 1997 aa11.28□□□□□ -0.6
MCF2L-227ENST00000486806 PPP1R12BO60237 982 aaPredicted RBP11.27□□□□□ -0.61
MCF2L-227ENST00000486806 TOMM70O94826 608 aa11.27□□□□□ -0.61
MCF2L-227ENST00000486806 CD2BP2O95400 341 aaKnown RBP11.27□□□□□ -0.61
MCF2L-227ENST00000486806 ASNSP08243 561 aa11.27□□□□□ -0.61
MCF2L-227ENST00000486806 NEK4P51957 841 aa11.27□□□□□ -0.61
MCF2L-227ENST00000486806 FKBP1BP68106 108 aa11.27□□□□□ -0.61
MCF2L-227ENST00000486806 TOB2Q14106 344 aaPredicted RBP11.27□□□□□ -0.61
MCF2L-227ENST00000486806 VGLL4Q14135 290 aa11.27□□□□□ -0.61
MCF2L-227ENST00000486806 SEPT2Q15019 361 aa11.27□□□□□ -0.61
MCF2L-227ENST00000486806 RCSD1Q6JBY9 416 aa11.27□□□□□ -0.61
MCF2L-227ENST00000486806 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.27□□□□□ -0.61
MCF2L-227ENST00000486806 CLEC10AQ8IUN9 316 aa11.27□□□□□ -0.61
MCF2L-227ENST00000486806 SCYL3Q8IZE3 742 aa11.27□□□□□ -0.61
MCF2L-227ENST00000486806 ANKS1AQ92625 1134 aa11.27□□□□□ -0.61
MCF2L-227ENST00000486806 ZKSCAN3Q9BRR0 538 aa11.27□□□□□ -0.61
MCF2L-227ENST00000486806 UBAC1Q9BSL1 405 aa11.27□□□□□ -0.61
MCF2L-227ENST00000486806 GPHNQ9NQX3 736 aaPredicted RBP11.27□□□□□ -0.61
MCF2L-227ENST00000486806 PDRG1Q9NUG6 133 aa11.27□□□□□ -0.61
MCF2L-227ENST00000486806 MTMR4Q9NYA4 1195 aa11.27□□□□□ -0.61
MCF2L-227ENST00000486806 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.27□□□□□ -0.61
MCF2L-227ENST00000486806 ANGEL1Q9UNK9 670 aaKnown RBP11.27□□□□□ -0.61
MCF2L-227ENST00000486806 SNCAIPQ9Y6H5 919 aa11.27□□□□□ -0.61
MCF2L-227ENST00000486806 DOCK1Q14185 1865 aa11.26□□□□□ -0.61
MCF2L-227ENST00000486806 UNCXA6NJT0 531 aa11.26□□□□□ -0.61
MCF2L-227ENST00000486806 MPHOSPH10O00566 681 aaKnown RBP11.26□□□□□ -0.61
MCF2L-227ENST00000486806 IFIT3O14879 490 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms