RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 COL9A3Q14050 684 aaPredicted RBP15.57■□□□□ 0.08
VTI1BP1-201ENST00000486325 NFXL1Q6ZNB6 911 aa15.57■□□□□ 0.08
VTI1BP1-201ENST00000486325 SH3BP5LQ7L8J4 393 aa15.57■□□□□ 0.08
VTI1BP1-201ENST00000486325 DGKHQ86XP1 1220 aa15.57■□□□□ 0.08
VTI1BP1-201ENST00000486325 NEDD1Q8NHV4 660 aa15.57■□□□□ 0.08
VTI1BP1-201ENST00000486325 SLKQ9H2G2 1235 aaPredicted RBP15.57■□□□□ 0.08
VTI1BP1-201ENST00000486325 CWC22Q9HCG8 908 aaKnown RBP15.57■□□□□ 0.08
VTI1BP1-201ENST00000486325 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.57■□□□□ 0.08
VTI1BP1-201ENST00000486325 ADAMTSL1Q8N6G6 1762 aa15.57■□□□□ 0.08
VTI1BP1-201ENST00000486325 DHX16O60231 1041 aaKnown RBP15.56■□□□□ 0.08
VTI1BP1-201ENST00000486325 EVX2Q03828 476 aa15.56■□□□□ 0.08
VTI1BP1-201ENST00000486325 APOBRQ0VD83 1088 aa15.56■□□□□ 0.08
VTI1BP1-201ENST00000486325 RASA3Q14644 834 aa15.56■□□□□ 0.08
VTI1BP1-201ENST00000486325 ME3Q16798 604 aa15.56■□□□□ 0.08
VTI1BP1-201ENST00000486325 USP50Q70EL3 339 aaPredicted RBP15.56■□□□□ 0.08
VTI1BP1-201ENST00000486325 ANKS1AQ92625 1134 aa15.56■□□□□ 0.08
VTI1BP1-201ENST00000486325 PPP2R3BQ9Y5P8 575 aa15.56■□□□□ 0.08
VTI1BP1-201ENST00000486325 LAMB1P07942 1786 aa15.55■□□□□ 0.08
VTI1BP1-201ENST00000486325 CNTNAP1P78357 1384 aa15.55■□□□□ 0.08
VTI1BP1-201ENST00000486325 PITPNM2Q9BZ72 1349 aa15.55■□□□□ 0.08
VTI1BP1-201ENST00000486325 PFKFB2O60825 505 aa15.55■□□□□ 0.08
VTI1BP1-201ENST00000486325 EGFRP00533 1210 aa15.55■□□□□ 0.08
VTI1BP1-201ENST00000486325 PDIA3P30101 505 aaKnown RBP15.55■□□□□ 0.08
VTI1BP1-201ENST00000486325 RCAN1P53805 252 aa15.55■□□□□ 0.08
VTI1BP1-201ENST00000486325 PPP2R5BQ15173 497 aa15.55■□□□□ 0.08
VTI1BP1-201ENST00000486325 FAM47AQ5JRC9 791 aa15.55■□□□□ 0.08
VTI1BP1-201ENST00000486325 IFIT1BQ5T764 474 aaKnown RBP15.55■□□□□ 0.08
VTI1BP1-201ENST00000486325 TATDN1Q6P1N9 297 aa15.55■□□□□ 0.08
VTI1BP1-201ENST00000486325 SLC44A5Q8NCS7 719 aa15.55■□□□□ 0.08
VTI1BP1-201ENST00000486325 TRPM4Q8TD43 1214 aa15.55■□□□□ 0.08
VTI1BP1-201ENST00000486325 ZC3H15Q8WU90 426 aaKnown RBP15.55■□□□□ 0.08
VTI1BP1-201ENST00000486325 LARP6Q9BRS8 491 aaKnown RBP15.55■□□□□ 0.08
VTI1BP1-201ENST00000486325 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.55■□□□□ 0.08
VTI1BP1-201ENST00000486325 LY9Q9HBG7 655 aa15.55■□□□□ 0.08
VTI1BP1-201ENST00000486325 SLC12A7Q9Y666 1083 aa15.55■□□□□ 0.08
VTI1BP1-201ENST00000486325 TNKSO95271 1327 aa15.54■□□□□ 0.08
VTI1BP1-201ENST00000486325 KLF18A0A0U1RQI7 1052 aa15.54■□□□□ 0.08
VTI1BP1-201ENST00000486325 SHMT1P34896 483 aa15.54■□□□□ 0.08
VTI1BP1-201ENST00000486325 HIRAP54198 1017 aaPredicted RBP15.54■□□□□ 0.08
VTI1BP1-201ENST00000486325 MAP3K10Q02779 954 aa15.54■□□□□ 0.08
VTI1BP1-201ENST00000486325 SEC23AQ15436 765 aa15.54■□□□□ 0.08
VTI1BP1-201ENST00000486325 CERKLQ49MI3 558 aaPredicted RBP15.54■□□□□ 0.08
VTI1BP1-201ENST00000486325 ANGEL2Q5VTE6 544 aaKnown RBP15.54■□□□□ 0.08
VTI1BP1-201ENST00000486325 DCPSQ96C86 337 aaKnown RBP15.54■□□□□ 0.08
VTI1BP1-201ENST00000486325 ZKSCAN3Q9BRR0 538 aa15.54■□□□□ 0.08
VTI1BP1-201ENST00000486325 TMEM39BQ9GZU3 492 aa15.54■□□□□ 0.08
VTI1BP1-201ENST00000486325 DEFB129Q9H1M3 183 aa15.54■□□□□ 0.08
VTI1BP1-201ENST00000486325 NAP1L2Q9ULW6 460 aaPredicted RBP15.54■□□□□ 0.08
VTI1BP1-201ENST00000486325 DDX60LQ5H9U9 1706 aaKnown RBP15.54■□□□□ 0.08
VTI1BP1-201ENST00000486325 CALM1P0DP23 149 aa15.53■□□□□ 0.08
VTI1BP1-201ENST00000486325 CALM2P0DP24 149 aa15.53■□□□□ 0.08
VTI1BP1-201ENST00000486325 CALM3P0DP25 149 aa15.53■□□□□ 0.08
VTI1BP1-201ENST00000486325 EPHX2P34913 555 aa15.53■□□□□ 0.08
VTI1BP1-201ENST00000486325 CATIPQ7Z7H3 387 aa15.53■□□□□ 0.08
VTI1BP1-201ENST00000486325 PNMA8AQ86V59 439 aaPredicted RBP15.53■□□□□ 0.08
VTI1BP1-201ENST00000486325 ENAHQ8N8S7 591 aaPredicted RBP15.53■□□□□ 0.08
VTI1BP1-201ENST00000486325 NKX2-3Q8TAU0 364 aa15.53■□□□□ 0.08
VTI1BP1-201ENST00000486325 LLPHQ9BRT6 129 aaKnown RBP15.53■□□□□ 0.08
VTI1BP1-201ENST00000486325 CABP5Q9NP86 173 aa15.53■□□□□ 0.08
VTI1BP1-201ENST00000486325 GPHNQ9NQX3 736 aaPredicted RBP15.53■□□□□ 0.08
VTI1BP1-201ENST00000486325 PGAP2Q9UHJ9 254 aa15.53■□□□□ 0.08
VTI1BP1-201ENST00000486325 CCDC196A0A1B0GTZ2 297 aa15.52■□□□□ 0.08
VTI1BP1-201ENST00000486325 ZBTB43O43298 467 aa15.52■□□□□ 0.08
VTI1BP1-201ENST00000486325 PDIA4P13667 645 aaKnown RBP15.52■□□□□ 0.08
VTI1BP1-201ENST00000486325 SUPT20HL1Q3ZLR7 823 aa15.52■□□□□ 0.08
VTI1BP1-201ENST00000486325 DCAF15Q66K64 600 aa15.52■□□□□ 0.08
VTI1BP1-201ENST00000486325 CPLX2Q6PUV4 134 aaKnown RBP15.52■□□□□ 0.08
VTI1BP1-201ENST00000486325 APOA5Q6Q788 366 aa15.52■□□□□ 0.08
VTI1BP1-201ENST00000486325 CCDC83Q8IWF9 413 aa15.52■□□□□ 0.08
VTI1BP1-201ENST00000486325 GTF3C6Q969F1 213 aa15.52■□□□□ 0.08
VTI1BP1-201ENST00000486325 KAT14Q9H8E8 782 aa15.52■□□□□ 0.08
VTI1BP1-201ENST00000486325 IL17RBQ9NRM6 502 aa15.52■□□□□ 0.08
VTI1BP1-201ENST00000486325 BRPF3Q9ULD4 1205 aa15.52■□□□□ 0.08
VTI1BP1-201ENST00000486325 GOLGB1Q14789 3259 aaKnown RBP15.51■□□□□ 0.07
VTI1BP1-201ENST00000486325 PLIN4Q96Q06 1357 aa15.51■□□□□ 0.07
VTI1BP1-201ENST00000486325 STK3Q13188 491 aa15.51■□□□□ 0.07
VTI1BP1-201ENST00000486325 SPRYD3Q8NCJ5 442 aa15.51■□□□□ 0.07
VTI1BP1-201ENST00000486325 TEPSINQ96N21 525 aa15.51■□□□□ 0.07
VTI1BP1-201ENST00000486325 MAP3K14Q99558 947 aa15.51■□□□□ 0.07
VTI1BP1-201ENST00000486325 KANSL2Q9H9L4 492 aa15.51■□□□□ 0.07
VTI1BP1-201ENST00000486325 GINM1Q9NU53 330 aa15.51■□□□□ 0.07
VTI1BP1-201ENST00000486325 GGA3Q9NZ52 723 aa15.51■□□□□ 0.07
VTI1BP1-201ENST00000486325 SMC3Q9UQE7 1217 aa15.51■□□□□ 0.07
VTI1BP1-201ENST00000486325 ASTN2O75129 1339 aaPredicted RBP15.5■□□□□ 0.07
VTI1BP1-201ENST00000486325 GOLGA8BA8MQT2 603 aa15.5■□□□□ 0.07
VTI1BP1-201ENST00000486325 MPHOSPH10O00566 681 aaKnown RBP15.5■□□□□ 0.07
VTI1BP1-201ENST00000486325 CPLX1O14810 134 aa15.5■□□□□ 0.07
VTI1BP1-201ENST00000486325 DDAH1O94760 285 aa15.5■□□□□ 0.07
VTI1BP1-201ENST00000486325 LARGE1O95461 756 aa15.5■□□□□ 0.07
VTI1BP1-201ENST00000486325 TOP1P11387 765 aaKnown RBP15.5■□□□□ 0.07
VTI1BP1-201ENST00000486325 AKR1B1P15121 316 aa15.5■□□□□ 0.07
VTI1BP1-201ENST00000486325 NOVP48745 357 aa15.5■□□□□ 0.07
VTI1BP1-201ENST00000486325 METAP2P50579 478 aaKnown RBP eCLIP15.5■□□□□ 0.07
VTI1BP1-201ENST00000486325 ABCB5Q2M3G0 1257 aa15.5■□□□□ 0.07
VTI1BP1-201ENST00000486325 TMEM179Q6ZVK1 233 aa15.5■□□□□ 0.07
VTI1BP1-201ENST00000486325 SULF1Q8IWU6 871 aa15.5■□□□□ 0.07
VTI1BP1-201ENST00000486325 ZNF654Q8IZM8 581 aa15.5■□□□□ 0.07
VTI1BP1-201ENST00000486325 NECAB1Q8N987 351 aa15.5■□□□□ 0.07
VTI1BP1-201ENST00000486325 TAF1DQ9H5J8 278 aaPredicted RBP15.5■□□□□ 0.07
VTI1BP1-201ENST00000486325 DNAJC18Q9H819 358 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms