RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 HMGCS2P54868 508 aa11.42□□□□□ -0.58
TMEM39A-208ENST00000486159 OS9Q13438 667 aaPredicted RBP11.42□□□□□ -0.58
TMEM39A-208ENST00000486159 NAA16Q6N069 864 aaPredicted RBP11.42□□□□□ -0.58
TMEM39A-208ENST00000486159 FASTKD5Q7L8L6 764 aaKnown RBP11.42□□□□□ -0.58
TMEM39A-208ENST00000486159 RPAP2Q8IXW5 612 aaPredicted RBP11.42□□□□□ -0.58
TMEM39A-208ENST00000486159 SAP30BPQ9UHR5 308 aaKnown RBP11.42□□□□□ -0.58
TMEM39A-208ENST00000486159 PALD1Q9ULE6 856 aa11.42□□□□□ -0.58
TMEM39A-208ENST00000486159 COLQQ9Y215 455 aaPredicted RBP11.42□□□□□ -0.58
TMEM39A-208ENST00000486159 H0YGN5 161 aa11.41□□□□□ -0.58
TMEM39A-208ENST00000486159 GDF11O95390 407 aa11.41□□□□□ -0.58
TMEM39A-208ENST00000486159 GNRH1P01148 92 aa11.41□□□□□ -0.58
TMEM39A-208ENST00000486159 CAP2P40123 477 aa11.41□□□□□ -0.58
TMEM39A-208ENST00000486159 FCGRTP55899 365 aa11.41□□□□□ -0.58
TMEM39A-208ENST00000486159 GSTO1P78417 241 aa11.41□□□□□ -0.58
TMEM39A-208ENST00000486159 EVX2Q03828 476 aa11.41□□□□□ -0.58
TMEM39A-208ENST00000486159 RNF208Q9H0X6 261 aa11.41□□□□□ -0.58
TMEM39A-208ENST00000486159 BIN2Q9UBW5 565 aaPredicted RBP11.41□□□□□ -0.58
TMEM39A-208ENST00000486159 AGTPBP1Q9UPW5 1226 aa11.41□□□□□ -0.58
TMEM39A-208ENST00000486159 EXOC6BQ9Y2D4 811 aa11.41□□□□□ -0.58
TMEM39A-208ENST00000486159 FLT1P17948 1338 aa11.4□□□□□ -0.58
TMEM39A-208ENST00000486159 HOXD10P28358 340 aa11.4□□□□□ -0.58
TMEM39A-208ENST00000486159 PRMT2P55345 433 aa11.4□□□□□ -0.58
TMEM39A-208ENST00000486159 PPP4CP60510 307 aa11.4□□□□□ -0.58
TMEM39A-208ENST00000486159 TRIM32Q13049 653 aa11.4□□□□□ -0.58
TMEM39A-208ENST00000486159 CCDC158Q5M9N0 1113 aa11.4□□□□□ -0.58
TMEM39A-208ENST00000486159 CEP85Q6P2H3 762 aa11.4□□□□□ -0.58
TMEM39A-208ENST00000486159 POTEEQ6S8J3 1075 aa11.4□□□□□ -0.58
TMEM39A-208ENST00000486159 MIGA1Q8NAN2 632 aa11.4□□□□□ -0.58
TMEM39A-208ENST00000486159 ZNF280CQ8ND82 737 aa11.4□□□□□ -0.58
TMEM39A-208ENST00000486159 SMCR8Q8TEV9 937 aaPredicted RBP11.4□□□□□ -0.58
TMEM39A-208ENST00000486159 BCL11AQ9H165 835 aa11.4□□□□□ -0.58
TMEM39A-208ENST00000486159 GPR108Q9NPR9 543 aa11.4□□□□□ -0.58
TMEM39A-208ENST00000486159 TAOK2Q9UL54 1235 aa11.4□□□□□ -0.58
TMEM39A-208ENST00000486159 NOP58Q9Y2X3 529 aaKnown RBP11.4□□□□□ -0.58
TMEM39A-208ENST00000486159 FOCADQ5VW36 1801 aa11.39□□□□□ -0.59
TMEM39A-208ENST00000486159 LOC285556D6RIA3 1793 aa11.39□□□□□ -0.59
TMEM39A-208ENST00000486159 MAST2Q6P0Q8 1798 aa11.39□□□□□ -0.59
TMEM39A-208ENST00000486159 TNPO2O14787 897 aaKnown RBP11.39□□□□□ -0.59
TMEM39A-208ENST00000486159 ADCY3O60266 1144 aa11.39□□□□□ -0.59
TMEM39A-208ENST00000486159 INHAP05111 366 aa11.39□□□□□ -0.59
TMEM39A-208ENST00000486159 CYP7A1P22680 504 aa11.39□□□□□ -0.59
TMEM39A-208ENST00000486159 MTMR2Q13614 643 aa11.39□□□□□ -0.59
TMEM39A-208ENST00000486159 SLFNL1Q499Z3 407 aa11.39□□□□□ -0.59
TMEM39A-208ENST00000486159 UBE2Q1Q7Z7E8 422 aa11.39□□□□□ -0.59
TMEM39A-208ENST00000486159 ASCC2Q9H1I8 757 aaPredicted RBP11.39□□□□□ -0.59
TMEM39A-208ENST00000486159 IL1RAPL2Q9NP60 686 aa11.39□□□□□ -0.59
TMEM39A-208ENST00000486159 SLC45A1Q9Y2W3 748 aa11.39□□□□□ -0.59
TMEM39A-208ENST00000486159 PLXNB2O15031 1838 aa11.39□□□□□ -0.59
TMEM39A-208ENST00000486159 USP17L5A8MUK1 530 aa11.38□□□□□ -0.59
TMEM39A-208ENST00000486159 APBB1O00213 710 aa11.38□□□□□ -0.59
TMEM39A-208ENST00000486159 HMMRO75330 724 aa11.38□□□□□ -0.59
TMEM39A-208ENST00000486159 IDH1O75874 414 aaKnown RBP11.38□□□□□ -0.59
TMEM39A-208ENST00000486159 GJB1P08034 283 aa11.38□□□□□ -0.59
TMEM39A-208ENST00000486159 ANP32AP39687 249 aaKnown RBP11.38□□□□□ -0.59
TMEM39A-208ENST00000486159 GJA8P48165 433 aa11.38□□□□□ -0.59
TMEM39A-208ENST00000486159 NUBP1P53384 320 aa11.38□□□□□ -0.59
TMEM39A-208ENST00000486159 NUCB1Q02818 461 aa11.38□□□□□ -0.59
TMEM39A-208ENST00000486159 MAGEB6Q8N7X4 407 aa11.38□□□□□ -0.59
TMEM39A-208ENST00000486159 U2AF1L4Q8WU68 220 aaKnown RBP11.38□□□□□ -0.59
TMEM39A-208ENST00000486159 P2RX7Q99572 595 aaKnown RBP11.38□□□□□ -0.59
TMEM39A-208ENST00000486159 TXNRD2Q9NNW7 524 aa11.38□□□□□ -0.59
TMEM39A-208ENST00000486159 PI4KBQ9UBF8 816 aa11.38□□□□□ -0.59
TMEM39A-208ENST00000486159 COL2A1P02458 1487 aaPredicted RBP11.38□□□□□ -0.59
TMEM39A-208ENST00000486159 BAG3O95817 575 aa11.37□□□□□ -0.59
TMEM39A-208ENST00000486159 CHGBP05060 677 aa11.37□□□□□ -0.59
TMEM39A-208ENST00000486159 Q3C1V9 767 aa11.37□□□□□ -0.59
TMEM39A-208ENST00000486159 SH3D19Q5HYK7 790 aa11.37□□□□□ -0.59
TMEM39A-208ENST00000486159 METTL16Q86W50 562 aaKnown RBP11.37□□□□□ -0.59
TMEM39A-208ENST00000486159 SIRT2Q8IXJ6 389 aa11.37□□□□□ -0.59
TMEM39A-208ENST00000486159 PROCA1Q8NCQ7 364 aaPredicted RBP11.37□□□□□ -0.59
TMEM39A-208ENST00000486159 DPF3Q92784 378 aa11.37□□□□□ -0.59
TMEM39A-208ENST00000486159 EDC3Q96F86 508 aaKnown RBP11.37□□□□□ -0.59
TMEM39A-208ENST00000486159 NOL10Q9BSC4 688 aaKnown RBP11.37□□□□□ -0.59
TMEM39A-208ENST00000486159 HERC5Q9UII4 1024 aaKnown RBP11.37□□□□□ -0.59
TMEM39A-208ENST00000486159 GJD2Q9UKL4 321 aa11.37□□□□□ -0.59
TMEM39A-208ENST00000486159 MYH1P12882 1939 aa11.37□□□□□ -0.59
TMEM39A-208ENST00000486159 SMIM22K7EJ46 135 aa11.36□□□□□ -0.59
TMEM39A-208ENST00000486159 EIF5BO60841 1220 aaKnown RBP11.36□□□□□ -0.59
TMEM39A-208ENST00000486159 SGPL1O95470 568 aa11.36□□□□□ -0.59
TMEM39A-208ENST00000486159 MAP4K4O95819 1239 aaPredicted RBP11.36□□□□□ -0.59
TMEM39A-208ENST00000486159 BACE1P56817 501 aa11.36□□□□□ -0.59
TMEM39A-208ENST00000486159 UBXN2AP68543 259 aa11.36□□□□□ -0.59
TMEM39A-208ENST00000486159 ZYXQ15942 572 aaKnown RBP11.36□□□□□ -0.59
TMEM39A-208ENST00000486159 AACSQ86V21 672 aa11.36□□□□□ -0.59
TMEM39A-208ENST00000486159 SLAIN1Q8ND83 568 aa11.36□□□□□ -0.59
TMEM39A-208ENST00000486159 DIS3LQ8TF46 1054 aaKnown RBP11.36□□□□□ -0.59
TMEM39A-208ENST00000486159 ZNF512BQ96KM6 892 aaPredicted RBP11.36□□□□□ -0.59
TMEM39A-208ENST00000486159 DEFB118Q96PH6 123 aa11.36□□□□□ -0.59
TMEM39A-208ENST00000486159 WDR18Q9BV38 432 aa11.36□□□□□ -0.59
TMEM39A-208ENST00000486159 DCTPP1Q9H773 170 aa11.36□□□□□ -0.59
TMEM39A-208ENST00000486159 EMILIN3Q9NT22 766 aa11.36□□□□□ -0.59
TMEM39A-208ENST00000486159 GH2P01242 217 aa11.35□□□□□ -0.59
TMEM39A-208ENST00000486159 PLCD1P51178 756 aa11.35□□□□□ -0.59
TMEM39A-208ENST00000486159 FAM110CQ1W6H9 321 aa11.35□□□□□ -0.59
TMEM39A-208ENST00000486159 CHD1LQ86WJ1 897 aa11.35□□□□□ -0.59
TMEM39A-208ENST00000486159 FOXP4Q8IVH2 680 aaPredicted RBP11.35□□□□□ -0.59
TMEM39A-208ENST00000486159 CRACR2BQ8N4Y2 399 aaPredicted RBP11.35□□□□□ -0.59
TMEM39A-208ENST00000486159 DHX36Q9H2U1 1008 aaKnown RBP11.35□□□□□ -0.59
TMEM39A-208ENST00000486159 ZBTB21Q9ULJ3 1066 aa11.35□□□□□ -0.59
TMEM39A-208ENST00000486159 ALPK3Q96L96 1907 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms