RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 RGS2P41220 211 aa12.25□□□□□ -0.45
SND1-213ENST00000486037 HERVK_113P62684 666 aa12.25□□□□□ -0.45
SND1-213ENST00000486037 SH3D19Q5HYK7 790 aa12.25□□□□□ -0.45
SND1-213ENST00000486037 SLC39A5Q6ZMH5 540 aa12.25□□□□□ -0.45
SND1-213ENST00000486037 ANKRD44Q8N8A2 993 aa12.25□□□□□ -0.45
SND1-213ENST00000486037 LPAR1Q92633 364 aa12.25□□□□□ -0.45
SND1-213ENST00000486037 RNPC3Q96LT9 517 aaKnown RBP12.25□□□□□ -0.45
SND1-213ENST00000486037 BICC1Q9H694 974 aaKnown RBP12.25□□□□□ -0.45
SND1-213ENST00000486037 THEGQ9P2T0 379 aa12.25□□□□□ -0.45
SND1-213ENST00000486037 IL16Q14005 1332 aa12.25□□□□□ -0.45
SND1-213ENST00000486037 DNM1LO00429 736 aa12.24□□□□□ -0.45
SND1-213ENST00000486037 GAKO14976 1311 aa12.24□□□□□ -0.45
SND1-213ENST00000486037 LDHBP07195 334 aaKnown RBP12.24□□□□□ -0.45
SND1-213ENST00000486037 JAG1P78504 1218 aa12.24□□□□□ -0.45
SND1-213ENST00000486037 MYO9BQ13459 2157 aa12.24□□□□□ -0.45
SND1-213ENST00000486037 ADGRE1Q14246 886 aa12.24□□□□□ -0.45
SND1-213ENST00000486037 CCDC85BQ15834 202 aaPredicted RBP12.24□□□□□ -0.45
SND1-213ENST00000486037 SHROOM1Q2M3G4 852 aaPredicted RBP12.24□□□□□ -0.45
SND1-213ENST00000486037 ANO1Q5XXA6 986 aa12.24□□□□□ -0.45
SND1-213ENST00000486037 TRMT44Q8IYL2 757 aaKnown RBP12.24□□□□□ -0.45
SND1-213ENST00000486037 GPRC5AQ8NFJ5 357 aa12.24□□□□□ -0.45
SND1-213ENST00000486037 KIF16BQ96L93 1317 aa12.24□□□□□ -0.45
SND1-213ENST00000486037 ZNF576Q9H609 170 aa12.24□□□□□ -0.45
SND1-213ENST00000486037 C9orf78Q9NZ63 289 aaPredicted RBP12.24□□□□□ -0.45
SND1-213ENST00000486037 PIEZO1Q92508 2521 aa12.24□□□□□ -0.45
SND1-213ENST00000486037 CNGA1P29973 690 aa12.23□□□□□ -0.45
SND1-213ENST00000486037 MAPK4P31152 587 aa12.23□□□□□ -0.45
SND1-213ENST00000486037 ERVK-9P63128 1117 aa12.23□□□□□ -0.45
SND1-213ENST00000486037 ERVK-24P63145 666 aa12.23□□□□□ -0.45
SND1-213ENST00000486037 IRX3P78415 501 aaPredicted RBP12.23□□□□□ -0.45
SND1-213ENST00000486037 MRPS5P82675 430 aaKnown RBP12.23□□□□□ -0.45
SND1-213ENST00000486037 PABPC4Q13310 644 aaKnown RBP eCLIP12.23□□□□□ -0.45
SND1-213ENST00000486037 MTMR2Q13614 643 aa12.23□□□□□ -0.45
SND1-213ENST00000486037 SNX17Q15036 470 aa12.23□□□□□ -0.45
SND1-213ENST00000486037 PUM3Q15397 648 aaKnown RBP12.23□□□□□ -0.45
SND1-213ENST00000486037 PLEKHH3Q7Z736 793 aa12.23□□□□□ -0.45
SND1-213ENST00000486037 PAGR1Q9BTK6 254 aa12.23□□□□□ -0.45
SND1-213ENST00000486037 LRFN3Q9BTN0 628 aa12.23□□□□□ -0.45
SND1-213ENST00000486037 PRDM12Q9H4Q4 367 aa12.23□□□□□ -0.45
SND1-213ENST00000486037 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.23□□□□□ -0.45
SND1-213ENST00000486037 TBC1D12O60347 775 aa12.22□□□□□ -0.45
SND1-213ENST00000486037 VAMP4O75379 141 aa12.22□□□□□ -0.45
SND1-213ENST00000486037 CNMDO75829 334 aa12.22□□□□□ -0.45
SND1-213ENST00000486037 IFIT1P09914 478 aaKnown RBP12.22□□□□□ -0.45
SND1-213ENST00000486037 HOXA7P31268 230 aaPredicted RBP12.22□□□□□ -0.45
SND1-213ENST00000486037 CYP2C19P33261 490 aa12.22□□□□□ -0.45
SND1-213ENST00000486037 CAP2P40123 477 aa12.22□□□□□ -0.45
SND1-213ENST00000486037 PBX2P40425 430 aa12.22□□□□□ -0.45
SND1-213ENST00000486037 MAP2K5Q13163 448 aa12.22□□□□□ -0.45
SND1-213ENST00000486037 RABL6Q3YEC7 729 aaPredicted RBP12.22□□□□□ -0.45
SND1-213ENST00000486037 NPLOC4Q8TAT6 608 aa12.22□□□□□ -0.45
SND1-213ENST00000486037 OSBPL5Q9H0X9 879 aaPredicted RBP12.22□□□□□ -0.45
SND1-213ENST00000486037 EPHX3Q9H6B9 360 aa12.22□□□□□ -0.45
SND1-213ENST00000486037 SUPT16HQ9Y5B9 1047 aaKnown RBP12.22□□□□□ -0.45
SND1-213ENST00000486037 CACNA1FO60840 1977 aa12.21□□□□□ -0.45
SND1-213ENST00000486037 FANCIQ9NVI1 1328 aa12.21□□□□□ -0.45
SND1-213ENST00000486037 USP17L5A8MUK1 530 aa12.21□□□□□ -0.45
SND1-213ENST00000486037 GRXCR1A8MXD5 290 aa12.21□□□□□ -0.45
SND1-213ENST00000486037 IGHA2P01877 340 aa12.21□□□□□ -0.45
SND1-213ENST00000486037 BTDP43251 543 aa12.21□□□□□ -0.45
SND1-213ENST00000486037 RHBDL3P58872 404 aa12.21□□□□□ -0.45
SND1-213ENST00000486037 ALYREFQ86V81 257 aaKnown RBP12.21□□□□□ -0.45
SND1-213ENST00000486037 FERMT2Q96AC1 680 aa12.21□□□□□ -0.45
SND1-213ENST00000486037 TIFAQ96CG3 184 aa12.21□□□□□ -0.45
SND1-213ENST00000486037 SIPA1L1O43166 1804 aa12.21□□□□□ -0.46
SND1-213ENST00000486037 MUC6Q6W4X9 2439 aa12.2□□□□□ -0.46
SND1-213ENST00000486037 UTYO14607 1347 aa12.2□□□□□ -0.46
SND1-213ENST00000486037 SALL1Q9NSC2 1324 aa12.2□□□□□ -0.46
SND1-213ENST00000486037 BMP1P13497 986 aa12.2□□□□□ -0.46
SND1-213ENST00000486037 CYBAP13498 195 aa12.2□□□□□ -0.46
SND1-213ENST00000486037 TLE2Q04725 743 aa12.2□□□□□ -0.46
SND1-213ENST00000486037 AKNAD1Q5T1N1 836 aa12.2□□□□□ -0.46
SND1-213ENST00000486037 MFSD14CQ5VZR4 134 aa12.2□□□□□ -0.46
SND1-213ENST00000486037 SLC4A10Q6U841 1118 aa12.2□□□□□ -0.46
SND1-213ENST00000486037 ZNF384Q8TF68 577 aa12.2□□□□□ -0.46
SND1-213ENST00000486037 EDC3Q96F86 508 aaKnown RBP12.2□□□□□ -0.46
SND1-213ENST00000486037 C1QTNF1Q9BXJ1 281 aa12.2□□□□□ -0.46
SND1-213ENST00000486037 RCAN3Q9UKA8 241 aa12.2□□□□□ -0.46
SND1-213ENST00000486037 PLXNA1Q9UIW2 1896 aa12.19□□□□□ -0.46
SND1-213ENST00000486037 WDFY4Q6ZS81 3184 aa12.19□□□□□ -0.46
SND1-213ENST00000486037 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.19□□□□□ -0.46
SND1-213ENST00000486037 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.19□□□□□ -0.46
SND1-213ENST00000486037 ALDH1L1O75891 902 aa12.19□□□□□ -0.46
SND1-213ENST00000486037 SLC5A1P13866 664 aa12.19□□□□□ -0.46
SND1-213ENST00000486037 ADCYAP1R1P41586 468 aa12.19□□□□□ -0.46
SND1-213ENST00000486037 PHKA1P46020 1223 aa12.19□□□□□ -0.46
SND1-213ENST00000486037 BACE1P56817 501 aa12.19□□□□□ -0.46
SND1-213ENST00000486037 TFF2Q03403 129 aa12.19□□□□□ -0.46
SND1-213ENST00000486037 LPIN2Q92539 896 aa12.19□□□□□ -0.46
SND1-213ENST00000486037 GAS2L1Q99501 681 aaPredicted RBP12.19□□□□□ -0.46
SND1-213ENST00000486037 PBX4Q9BYU1 374 aa12.19□□□□□ -0.46
SND1-213ENST00000486037 C11orf16Q9NQ32 467 aa12.19□□□□□ -0.46
SND1-213ENST00000486037 ARIH1Q9Y4X5 557 aaPredicted RBP12.19□□□□□ -0.46
SND1-213ENST00000486037 GTF3C3Q9Y5Q9 886 aa12.19□□□□□ -0.46
SND1-213ENST00000486037 MSCO60682 206 aa12.18□□□□□ -0.46
SND1-213ENST00000486037 RFX5P48382 616 aaPredicted RBP12.18□□□□□ -0.46
SND1-213ENST00000486037 KCNQ1P51787 676 aa12.18□□□□□ -0.46
SND1-213ENST00000486037 ATG9AQ7Z3C6 839 aa12.18□□□□□ -0.46
SND1-213ENST00000486037 KHSRPQ92945 711 aaKnown RBP eCLIP12.18□□□□□ -0.463e-7■■■□□ 15.3
SND1-213ENST00000486037 SNX27Q96L92 541 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms