RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 PI4KBQ9UBF8 816 aa25.45■■□□□ 1.66
LMBR1-217ENST00000485985 PNMA3Q9UL41 463 aa25.45■■□□□ 1.66
LMBR1-217ENST00000485985 SPP2Q13103 211 aa25.44■■□□□ 1.66
LMBR1-217ENST00000485985 C20orf194Q5TEA3 1177 aa25.44■■□□□ 1.66
LMBR1-217ENST00000485985 RPAP2Q8IXW5 612 aaPredicted RBP25.44■■□□□ 1.66
LMBR1-217ENST00000485985 MAGEB6Q8N7X4 407 aa25.44■■□□□ 1.66
LMBR1-217ENST00000485985 MIGA1Q8NAN2 632 aa25.44■■□□□ 1.66
LMBR1-217ENST00000485985 COA7Q96BR5 231 aa25.44■■□□□ 1.66
LMBR1-217ENST00000485985 PALD1Q9ULE6 856 aa25.44■■□□□ 1.66
LMBR1-217ENST00000485985 NR2E3Q9Y5X4 410 aa25.44■■□□□ 1.66
LMBR1-217ENST00000485985 JAG1P78504 1218 aa25.43■■□□□ 1.66
LMBR1-217ENST00000485985 METTL16Q86W50 562 aaKnown RBP25.43■■□□□ 1.66
LMBR1-217ENST00000485985 ZNF280CQ8ND82 737 aa25.43■■□□□ 1.66
LMBR1-217ENST00000485985 SAP30BPQ9UHR5 308 aaKnown RBP25.43■■□□□ 1.66
LMBR1-217ENST00000485985 TFRCP02786 760 aaKnown RBP25.42■■□□□ 1.66
LMBR1-217ENST00000485985 CAPN2P17655 700 aa25.42■■□□□ 1.66
LMBR1-217ENST00000485985 FAM110CQ1W6H9 321 aa25.42■■□□□ 1.66
LMBR1-217ENST00000485985 SHROOM1Q2M3G4 852 aaPredicted RBP25.42■■□□□ 1.66
LMBR1-217ENST00000485985 DEFB118Q96PH6 123 aa25.42■■□□□ 1.66
LMBR1-217ENST00000485985 TAOK2Q9UL54 1235 aa25.42■■□□□ 1.66
LMBR1-217ENST00000485985 HMMRO75330 724 aa25.41■■□□□ 1.66
LMBR1-217ENST00000485985 KIF1BPQ96EK5 621 aa25.41■■□□□ 1.66
LMBR1-217ENST00000485985 TBC1D2Q9BYX2 928 aa25.41■■□□□ 1.66
LMBR1-217ENST00000485985 PRO3102Q9H379 93 aa25.41■■□□□ 1.66
LMBR1-217ENST00000485985 PAK6Q9NQU5 681 aaPredicted RBP25.41■■□□□ 1.66
LMBR1-217ENST00000485985 MYH8P13535 1937 aa25.41■■□□□ 1.66
LMBR1-217ENST00000485985 GCLCP48506 637 aaPredicted RBP25.4■■□□□ 1.66
LMBR1-217ENST00000485985 HMGCS2P54868 508 aa25.4■■□□□ 1.66
LMBR1-217ENST00000485985 CLASRPQ8N2M8 674 aaKnown RBP25.4■■□□□ 1.66
LMBR1-217ENST00000485985 USP17L5A8MUK1 530 aa25.39■■□□□ 1.66
LMBR1-217ENST00000485985 MAP3K12Q12852 859 aa25.39■■□□□ 1.66
LMBR1-217ENST00000485985 PABPC4Q13310 644 aaKnown RBP eCLIP25.39■■□□□ 1.66
LMBR1-217ENST00000485985 BAZ2AQ9UIF9 1905 aaKnown RBP25.39■■□□□ 1.65
LMBR1-217ENST00000485985 RANBP2P49792 3224 aaKnown RBP25.38■■□□□ 1.65
LMBR1-217ENST00000485985 GDF11O95390 407 aa25.38■■□□□ 1.65
LMBR1-217ENST00000485985 SH3D19Q5HYK7 790 aa25.38■■□□□ 1.65
LMBR1-217ENST00000485985 CRACR2BQ8N4Y2 399 aaPredicted RBP25.38■■□□□ 1.65
LMBR1-217ENST00000485985 CRISPLD2Q9H0B8 497 aa25.38■■□□□ 1.65
LMBR1-217ENST00000485985 PLXNB2O15031 1838 aa25.37■■□□□ 1.65
LMBR1-217ENST00000485985 FOXP4Q8IVH2 680 aaPredicted RBP25.37■■□□□ 1.65
LMBR1-217ENST00000485985 BCL11AQ9H165 835 aa25.37■■□□□ 1.65
LMBR1-217ENST00000485985 ASCC2Q9H1I8 757 aaPredicted RBP25.37■■□□□ 1.65
LMBR1-217ENST00000485985 SZT2Q5T011 3432 aa25.36■■□□□ 1.65
LMBR1-217ENST00000485985 EVI5O60447 810 aa25.36■■□□□ 1.65
LMBR1-217ENST00000485985 HLA-DOAP06340 250 aa25.36■■□□□ 1.65
LMBR1-217ENST00000485985 ASNSP08243 561 aa25.36■■□□□ 1.65
LMBR1-217ENST00000485985 IFIT2P09913 472 aaKnown RBP25.36■■□□□ 1.65
LMBR1-217ENST00000485985 MTMR2Q13614 643 aa25.36■■□□□ 1.65
LMBR1-217ENST00000485985 PDE3AQ14432 1141 aa25.36■■□□□ 1.65
LMBR1-217ENST00000485985 CERS3Q8IU89 383 aa25.36■■□□□ 1.65
LMBR1-217ENST00000485985 RIOK1Q9BRS2 568 aaKnown RBP25.36■■□□□ 1.65
LMBR1-217ENST00000485985 TRIM34Q9BYJ4 488 aa25.36■■□□□ 1.65
LMBR1-217ENST00000485985 AS3MTQ9HBK9 375 aa25.36■■□□□ 1.65
LMBR1-217ENST00000485985 RAB11FIP3O75154 756 aa25.35■■□□□ 1.65
LMBR1-217ENST00000485985 PDE6AP16499 860 aa25.35■■□□□ 1.65
LMBR1-217ENST00000485985 USP5P45974 858 aa25.35■■□□□ 1.65
LMBR1-217ENST00000485985 TMED8Q6PL24 325 aaPredicted RBP25.35■■□□□ 1.65
LMBR1-217ENST00000485985 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.35■■□□□ 1.65
LMBR1-217ENST00000485985 EDC3Q96F86 508 aaKnown RBP25.35■■□□□ 1.65
LMBR1-217ENST00000485985 DNAJC2Q99543 621 aaKnown RBP25.35■■□□□ 1.65
LMBR1-217ENST00000485985 WDR18Q9BV38 432 aa25.35■■□□□ 1.65
LMBR1-217ENST00000485985 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.35■■□□□ 1.653e-6■■■■□ 19.8
LMBR1-217ENST00000485985 GJD2Q9UKL4 321 aa25.35■■□□□ 1.65
LMBR1-217ENST00000485985 ZBTB21Q9ULJ3 1066 aa25.35■■□□□ 1.65
LMBR1-217ENST00000485985 GOLIM4O00461 696 aa25.34■■□□□ 1.65
LMBR1-217ENST00000485985 TTF1Q15361 905 aaPredicted RBP25.34■■□□□ 1.65
LMBR1-217ENST00000485985 PAWRQ96IZ0 340 aaKnown RBP25.34■■□□□ 1.65
LMBR1-217ENST00000485985 CHMP4BQ9H444 224 aaKnown RBP25.34■■□□□ 1.65
LMBR1-217ENST00000485985 HMGCRP04035 888 aa25.33■■□□□ 1.65
LMBR1-217ENST00000485985 TCRBV5S4A2TA0A5A2 114 aa25.32■■□□□ 1.64
LMBR1-217ENST00000485985 BACE1P56817 501 aa25.32■■□□□ 1.64
LMBR1-217ENST00000485985 SLC9C2Q5TAH2 1124 aa25.32■■□□□ 1.64
LMBR1-217ENST00000485985 NECAB2Q7Z6G3 386 aa25.32■■□□□ 1.64
LMBR1-217ENST00000485985 EHD4Q9H223 541 aa25.32■■□□□ 1.64
LMBR1-217ENST00000485985 MORF4L1Q9UBU8 362 aa25.32■■□□□ 1.64
LMBR1-217ENST00000485985 ZNF532Q9HCE3 1301 aa25.32■■□□□ 1.64
LMBR1-217ENST00000485985 MAGEB6P1A0A0J9YX57 407 aa25.31■■□□□ 1.64
LMBR1-217ENST00000485985 GINM1Q9NU53 330 aa25.31■■□□□ 1.64
LMBR1-217ENST00000485985 ALPK3Q96L96 1907 aa25.31■■□□□ 1.64
LMBR1-217ENST00000485985 RPTORQ8N122 1335 aa25.31■■□□□ 1.64
LMBR1-217ENST00000485985 A0A1W2PPC1 479 aa25.3■■□□□ 1.64
LMBR1-217ENST00000485985 HOXA7P31268 230 aaPredicted RBP25.3■■□□□ 1.64
LMBR1-217ENST00000485985 IRX3P78415 501 aaPredicted RBP25.3■■□□□ 1.64
LMBR1-217ENST00000485985 TATDN1Q6P1N9 297 aa25.3■■□□□ 1.64
LMBR1-217ENST00000485985 ANKLE1Q8NAG6 615 aa25.3■■□□□ 1.64
LMBR1-217ENST00000485985 DIS3LQ8TF46 1054 aaKnown RBP25.3■■□□□ 1.64
LMBR1-217ENST00000485985 HMX1Q9NP08 348 aaPredicted RBP25.3■■□□□ 1.64
LMBR1-217ENST00000485985 TMOD4Q9NZQ9 345 aa25.3■■□□□ 1.64
LMBR1-217ENST00000485985 SERPINB13Q9UIV8 391 aa25.3■■□□□ 1.64
LMBR1-217ENST00000485985 GH2P01242 217 aa25.29■■□□□ 1.64
LMBR1-217ENST00000485985 EVX2Q03828 476 aa25.29■■□□□ 1.64
LMBR1-217ENST00000485985 TRIM32Q13049 653 aa25.29■■□□□ 1.64
LMBR1-217ENST00000485985 SLFNL1Q499Z3 407 aa25.29■■□□□ 1.64
LMBR1-217ENST00000485985 P2RX7Q99572 595 aaKnown RBP25.29■■□□□ 1.64
LMBR1-217ENST00000485985 BOLA2Q9H3K6 86 aa25.29■■□□□ 1.64
LMBR1-217ENST00000485985 C19orf81C9J6K1 198 aa25.28■■□□□ 1.64
LMBR1-217ENST00000485985 PLCD1P51178 756 aa25.28■■□□□ 1.64
LMBR1-217ENST00000485985 LCORLQ8N3X6 602 aa25.28■■□□□ 1.64
LMBR1-217ENST00000485985 PAG1Q9NWQ8 432 aa25.28■■□□□ 1.64
LMBR1-217ENST00000485985 STAP2Q9UGK3 403 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms