RNA–Protein interactions for RNA: ENST00000485798.5

NUCB1-211, Transcript of nucleobindin 1, humanhuman

TSL 3

Gene NUCB1, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-211ENST00000485798 PRKAB2O43741 272 aa18.2■□□□□ 0.5
NUCB1-211ENST00000485798 ZMYM1Q5SVZ6 1142 aa18.2■□□□□ 0.5
NUCB1-211ENST00000485798 FAM43AQ8N2R8 423 aa18.2■□□□□ 0.5
NUCB1-211ENST00000485798 WDR18Q9BV38 432 aa18.2■□□□□ 0.5
NUCB1-211ENST00000485798 GPAA1O43292 621 aa18.19■□□□□ 0.5
NUCB1-211ENST00000485798 SHMT1P34896 483 aa18.19■□□□□ 0.5
NUCB1-211ENST00000485798 CRHR2Q13324 411 aa18.19■□□□□ 0.5
NUCB1-211ENST00000485798 C12orf60Q5U649 245 aa18.19■□□□□ 0.5
NUCB1-211ENST00000485798 FASTKD5Q7L8L6 764 aaKnown RBP18.19■□□□□ 0.5
NUCB1-211ENST00000485798 AMOTL1Q8IY63 956 aa18.19■□□□□ 0.5
NUCB1-211ENST00000485798 AS3MTQ9HBK9 375 aa18.19■□□□□ 0.5
NUCB1-211ENST00000485798 ARPP21Q9UBL0 812 aaPredicted RBP18.19■□□□□ 0.5
NUCB1-211ENST00000485798 SWAP70Q9UH65 585 aa18.19■□□□□ 0.5
NUCB1-211ENST00000485798 ZBTB21Q9ULJ3 1066 aa18.19■□□□□ 0.5
NUCB1-211ENST00000485798 SLC45A1Q9Y2W3 748 aa18.19■□□□□ 0.5
NUCB1-211ENST00000485798 GSG1L2A8MUP6 293 aa18.18■□□□□ 0.5
NUCB1-211ENST00000485798 M0R2C6 588 aa18.18■□□□□ 0.5
NUCB1-211ENST00000485798 TAF1CQ15572 869 aaPredicted RBP18.18■□□□□ 0.5
NUCB1-211ENST00000485798 SLC4A8Q2Y0W8 1093 aa18.18■□□□□ 0.5
NUCB1-211ENST00000485798 SBK1Q52WX2 424 aa18.18■□□□□ 0.5
NUCB1-211ENST00000485798 ZNF280CQ8ND82 737 aa18.18■□□□□ 0.5
NUCB1-211ENST00000485798 ZNF296Q8WUU4 475 aaPredicted RBP18.18■□□□□ 0.5
NUCB1-211ENST00000485798 R3HDMLQ9H3Y0 253 aa18.18■□□□□ 0.5
NUCB1-211ENST00000485798 ROBO3Q96MS0 1386 aa18.17■□□□□ 0.5
NUCB1-211ENST00000485798 GREB1LQ9C091 1923 aaPredicted RBP18.17■□□□□ 0.5
NUCB1-211ENST00000485798 JAG1P78504 1218 aa18.17■□□□□ 0.5
NUCB1-211ENST00000485798 SH3D19Q5HYK7 790 aa18.17■□□□□ 0.5
NUCB1-211ENST00000485798 PROCA1Q8NCQ7 364 aaPredicted RBP18.17■□□□□ 0.5
NUCB1-211ENST00000485798 ZFYVE28Q9HCC9 887 aa18.17■□□□□ 0.5
NUCB1-211ENST00000485798 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.17■□□□□ 0.5
NUCB1-211ENST00000485798 TRIM75PA6NK02 468 aa18.16■□□□□ 0.5
NUCB1-211ENST00000485798 USP17L12C9JPN9 530 aa18.16■□□□□ 0.5
NUCB1-211ENST00000485798 USP17L21D6R901 530 aa18.16■□□□□ 0.5
NUCB1-211ENST00000485798 FKTNO75072 461 aa18.16■□□□□ 0.5
NUCB1-211ENST00000485798 GDF11O95390 407 aa18.16■□□□□ 0.5
NUCB1-211ENST00000485798 CERKLQ49MI3 558 aaPredicted RBP18.16■□□□□ 0.5
NUCB1-211ENST00000485798 GPAT2Q6NUI2 795 aa18.16■□□□□ 0.5
NUCB1-211ENST00000485798 CTR9Q6PD62 1173 aa18.16■□□□□ 0.5
NUCB1-211ENST00000485798 HELLSQ9NRZ9 838 aa18.16■□□□□ 0.5
NUCB1-211ENST00000485798 PATL2C9JE40 543 aaKnown RBP18.15■□□□□ 0.5
NUCB1-211ENST00000485798 PDHXO00330 501 aa18.15■□□□□ 0.5
NUCB1-211ENST00000485798 TLR2O60603 784 aa18.15■□□□□ 0.5
NUCB1-211ENST00000485798 CYP2D6P10635 497 aa18.15■□□□□ 0.5
NUCB1-211ENST00000485798 PDE4AP27815 886 aa18.15■□□□□ 0.5
NUCB1-211ENST00000485798 EVX2Q03828 476 aa18.15■□□□□ 0.5
NUCB1-211ENST00000485798 SPP2Q13103 211 aa18.15■□□□□ 0.5
NUCB1-211ENST00000485798 C16orf86Q6ZW13 317 aa18.15■□□□□ 0.5
NUCB1-211ENST00000485798 CCDC84Q86UT8 332 aaPredicted RBP18.15■□□□□ 0.5
NUCB1-211ENST00000485798 SEC62Q99442 399 aaKnown RBP18.15■□□□□ 0.5
NUCB1-211ENST00000485798 EPB41L4AQ9HCS5 686 aaPredicted RBP18.15■□□□□ 0.5
NUCB1-211ENST00000485798 ADGRA2Q96PE1 1338 aa18.15■□□□□ 0.5
NUCB1-211ENST00000485798 GH2P01242 217 aa18.14■□□□□ 0.49
NUCB1-211ENST00000485798 BACE1P56817 501 aa18.14■□□□□ 0.49
NUCB1-211ENST00000485798 ABCB5Q2M3G0 1257 aa18.14■□□□□ 0.49
NUCB1-211ENST00000485798 PARK7Q99497 189 aaKnown RBP18.14■□□□□ 0.49
NUCB1-211ENST00000485798 CABP5Q9NP86 173 aa18.14■□□□□ 0.49
NUCB1-211ENST00000485798 AGTPBP1Q9UPW5 1226 aa18.14■□□□□ 0.49
NUCB1-211ENST00000485798 HTTP42858 3142 aa18.14■□□□□ 0.49
NUCB1-211ENST00000485798 TRIM6-TRIM34B2RNG4 842 aa18.13■□□□□ 0.49
NUCB1-211ENST00000485798 C19orf81C9J6K1 198 aa18.13■□□□□ 0.49
NUCB1-211ENST00000485798 SHROOM1Q2M3G4 852 aaPredicted RBP18.13■□□□□ 0.49
NUCB1-211ENST00000485798 GADL1Q6ZQY3 521 aa18.13■□□□□ 0.49
NUCB1-211ENST00000485798 CTU1Q7Z7A3 348 aaKnown RBP18.13■□□□□ 0.49
NUCB1-211ENST00000485798 NACAP1Q9BZK3 213 aa18.13■□□□□ 0.49
NUCB1-211ENST00000485798 MCOLN1Q9GZU1 580 aa18.13■□□□□ 0.49
NUCB1-211ENST00000485798 MGAMO43451 1857 aa18.12■□□□□ 0.49
NUCB1-211ENST00000485798 CYP2D7A0A087X1C5 515 aa18.12■□□□□ 0.49
NUCB1-211ENST00000485798 USP17L10C9JJH3 530 aa18.12■□□□□ 0.49
NUCB1-211ENST00000485798 SP3Q02447 781 aa18.12■□□□□ 0.49
NUCB1-211ENST00000485798 IFNL3Q8IZI9 196 aa18.12■□□□□ 0.49
NUCB1-211ENST00000485798 DYNLL2Q96FJ2 89 aa18.12■□□□□ 0.49
NUCB1-211ENST00000485798 ERO1AQ96HE7 468 aa18.12■□□□□ 0.49
NUCB1-211ENST00000485798 CCDC17Q96LX7 622 aa18.12■□□□□ 0.49
NUCB1-211ENST00000485798 HIP1O00291 1037 aa18.11■□□□□ 0.49
NUCB1-211ENST00000485798 GUCY1A2P33402 732 aa18.11■□□□□ 0.49
NUCB1-211ENST00000485798 TDO2P48775 406 aa18.11■□□□□ 0.49
NUCB1-211ENST00000485798 CDK8P49336 464 aa18.11■□□□□ 0.49
NUCB1-211ENST00000485798 HMGCS2P54868 508 aa18.11■□□□□ 0.49
NUCB1-211ENST00000485798 PABPC4Q13310 644 aaKnown RBP eCLIP18.11■□□□□ 0.496e-10■■■□□ 16.1
NUCB1-211ENST00000485798 MTMR2Q13614 643 aa18.11■□□□□ 0.49
NUCB1-211ENST00000485798 PKN2Q16513 984 aaKnown RBP18.11■□□□□ 0.49
NUCB1-211ENST00000485798 MCMDC2Q4G0Z9 681 aa18.11■□□□□ 0.49
NUCB1-211ENST00000485798 C17orf99Q6UX52 265 aa18.11■□□□□ 0.49
NUCB1-211ENST00000485798 TMEM179Q6ZVK1 233 aa18.11■□□□□ 0.49
NUCB1-211ENST00000485798 SLC44A5Q8NCS7 719 aa18.11■□□□□ 0.49
NUCB1-211ENST00000485798 RILPL2Q969X0 211 aa18.11■□□□□ 0.49
NUCB1-211ENST00000485798 C12orf42Q96LP6 360 aa18.11■□□□□ 0.49
NUCB1-211ENST00000485798 PNMA3Q9UL41 463 aa18.11■□□□□ 0.49
NUCB1-211ENST00000485798 LAMA4Q16363 1823 aa18.11■□□□□ 0.49
NUCB1-211ENST00000485798 TNRC18O15417 2968 aaPredicted RBP18.11■□□□□ 0.49
NUCB1-211ENST00000485798 ZMYM6O95789 1325 aa18.1■□□□□ 0.49
NUCB1-211ENST00000485798 A0A0D9SFI3 127 aa18.1■□□□□ 0.49
NUCB1-211ENST00000485798 FOXP2O15409 715 aa18.1■□□□□ 0.49
NUCB1-211ENST00000485798 SDSP20132 328 aa18.1■□□□□ 0.49
NUCB1-211ENST00000485798 DGKZQ13574 1117 aa18.1■□□□□ 0.49
NUCB1-211ENST00000485798 TTC22Q5TAA0 569 aa18.1■□□□□ 0.49
NUCB1-211ENST00000485798 CENPQQ7L2Z9 268 aaPredicted RBP18.1■□□□□ 0.49
NUCB1-211ENST00000485798 FAM227BQ96M60 508 aa18.1■□□□□ 0.49
NUCB1-211ENST00000485798 KIAA1683Q9H0B3 1180 aa18.1■□□□□ 0.49
NUCB1-211ENST00000485798 SMIM22K7EJ46 135 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms