RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 HSPA1AP0DMV8 641 aaKnown RBP7.02□□□□□ -1.29
CUX1-208ENST00000485792 HSPA1BP0DMV9 641 aaKnown RBP7.02□□□□□ -1.29
CUX1-208ENST00000485792 PPP4CP60510 307 aa7.02□□□□□ -1.29
CUX1-208ENST00000485792 RASA3Q14644 834 aa7.02□□□□□ -1.29
CUX1-208ENST00000485792 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.02□□□□□ -1.29
CUX1-208ENST00000485792 PACS2Q86VP3 889 aa7.02□□□□□ -1.29
CUX1-208ENST00000485792 NKX2-3Q8TAU0 364 aa7.02□□□□□ -1.29
CUX1-208ENST00000485792 PI4K2BQ8TCG2 481 aa7.02□□□□□ -1.29
CUX1-208ENST00000485792 KIF1BPQ96EK5 621 aa7.02□□□□□ -1.29
CUX1-208ENST00000485792 CAPNS2Q96L46 248 aa7.02□□□□□ -1.29
CUX1-208ENST00000485792 RABGEF1Q9UJ41 708 aa7.02□□□□□ -1.29
CUX1-208ENST00000485792 MKI67P46013 3256 aaKnown RBP7.02□□□□□ -1.29
CUX1-208ENST00000485792 GOLGA8CPA6NN73 597 aa7.01□□□□□ -1.29
CUX1-208ENST00000485792 C3orf80F5H4A9 247 aa7.01□□□□□ -1.29
CUX1-208ENST00000485792 TRIM66O15016 1216 aa7.01□□□□□ -1.29
CUX1-208ENST00000485792 USP2O75604 605 aaPredicted RBP7.01□□□□□ -1.29
CUX1-208ENST00000485792 OATP04181 439 aa7.01□□□□□ -1.29
CUX1-208ENST00000485792 LDHBP07195 334 aaKnown RBP7.01□□□□□ -1.29
CUX1-208ENST00000485792 DYNLL1P63167 89 aaKnown RBP7.01□□□□□ -1.29
CUX1-208ENST00000485792 HDAC1Q13547 482 aaPredicted RBP7.01□□□□□ -1.29
CUX1-208ENST00000485792 DGKZQ13574 1117 aa7.01□□□□□ -1.29
CUX1-208ENST00000485792 MOGSQ13724 837 aa7.01□□□□□ -1.29
CUX1-208ENST00000485792 TNFAIP1Q13829 316 aa7.01□□□□□ -1.29
CUX1-208ENST00000485792 PRKG1Q13976 671 aa7.01□□□□□ -1.29
CUX1-208ENST00000485792 COL13A1Q5TAT6 717 aaPredicted RBP7.01□□□□□ -1.29
CUX1-208ENST00000485792 RGMBQ6NW40 437 aa7.01□□□□□ -1.29
CUX1-208ENST00000485792 METTL3Q86U44 580 aaKnown RBP7.01□□□□□ -1.29
CUX1-208ENST00000485792 CCDC84Q86UT8 332 aaPredicted RBP7.01□□□□□ -1.29
CUX1-208ENST00000485792 AACSQ86V21 672 aa7.01□□□□□ -1.29
CUX1-208ENST00000485792 C2orf69Q8N8R5 385 aa7.01□□□□□ -1.29
CUX1-208ENST00000485792 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.01□□□□□ -1.29
CUX1-208ENST00000485792 NEUROD6Q96NK8 337 aa7.01□□□□□ -1.29
CUX1-208ENST00000485792 RIOK1Q9BRS2 568 aaKnown RBP7.01□□□□□ -1.29
CUX1-208ENST00000485792 IL25Q9H293 177 aa7.01□□□□□ -1.29
CUX1-208ENST00000485792 KIAA1468Q9P260 1216 aa7.01□□□□□ -1.29
CUX1-208ENST00000485792 ZNF112Q9UJU3 913 aa7.01□□□□□ -1.29
CUX1-208ENST00000485792 SNCAIPQ9Y6H5 919 aa7.01□□□□□ -1.29
CUX1-208ENST00000485792 RBBP6Q7Z6E9 1792 aaKnown RBP7□□□□□ -1.29
CUX1-208ENST00000485792 BHMG1C9JSJ3 638 aaPredicted RBP7□□□□□ -1.29
CUX1-208ENST00000485792 IGF2BP3O00425 579 aaKnown RBP eCLIP7□□□□□ -1.29
CUX1-208ENST00000485792 MYO1BO43795 1136 aa7□□□□□ -1.29
CUX1-208ENST00000485792 HSPA8P11142 646 aaKnown RBP7□□□□□ -1.29
CUX1-208ENST00000485792 ATP5JP18859 108 aa7□□□□□ -1.29
CUX1-208ENST00000485792 ECE1P42892 770 aa7□□□□□ -1.29
CUX1-208ENST00000485792 BTDP43251 543 aa7□□□□□ -1.29
CUX1-208ENST00000485792 HUNKP57058 714 aa7□□□□□ -1.29
CUX1-208ENST00000485792 AMHR2Q16671 573 aa7□□□□□ -1.29
CUX1-208ENST00000485792 SPTY2D1Q68D10 685 aaPredicted RBP7□□□□□ -1.29
CUX1-208ENST00000485792 METTL16Q86W50 562 aaKnown RBP7□□□□□ -1.29
CUX1-208ENST00000485792 PXYLP1Q8TE99 480 aa7□□□□□ -1.29
CUX1-208ENST00000485792 SH3RF3Q8TEJ3 882 aaPredicted RBP7□□□□□ -1.29
CUX1-208ENST00000485792 FAM151AQ8WW52 585 aa7□□□□□ -1.29
CUX1-208ENST00000485792 TATDN2Q93075 761 aa7□□□□□ -1.29
CUX1-208ENST00000485792 CFHR5Q9BXR6 569 aa7□□□□□ -1.29
CUX1-208ENST00000485792 VEZTQ9HBM0 779 aa7□□□□□ -1.29
CUX1-208ENST00000485792 ABT1Q9ULW3 272 aaKnown RBP7□□□□□ -1.29
CUX1-208ENST00000485792 SUPT16HQ9Y5B9 1047 aaKnown RBP7□□□□□ -1.29
CUX1-208ENST00000485792 TACC3Q9Y6A5 838 aa7□□□□□ -1.29
CUX1-208ENST00000485792 PHF20L1A8MW92 1017 aa6.99□□□□□ -1.29
CUX1-208ENST00000485792 ENTPD3O75355 529 aa6.99□□□□□ -1.29
CUX1-208ENST00000485792 FRAT2O75474 233 aaPredicted RBP6.99□□□□□ -1.29
CUX1-208ENST00000485792 INPP5BP32019 993 aa6.99□□□□□ -1.29
CUX1-208ENST00000485792 TM4SF4P48230 202 aa6.99□□□□□ -1.29
CUX1-208ENST00000485792 RGS3P49796 1198 aa6.99□□□□□ -1.29
CUX1-208ENST00000485792 NOGQ13253 232 aa6.99□□□□□ -1.29
CUX1-208ENST00000485792 VGLL4Q14135 290 aa6.99□□□□□ -1.29
CUX1-208ENST00000485792 SUPT20HL1Q3ZLR7 823 aa6.99□□□□□ -1.29
CUX1-208ENST00000485792 CCDC158Q5M9N0 1113 aa6.99□□□□□ -1.29
CUX1-208ENST00000485792 NUDT18Q6ZVK8 323 aa6.99□□□□□ -1.29
CUX1-208ENST00000485792 ERICH6Q7L0X2 663 aa6.99□□□□□ -1.29
CUX1-208ENST00000485792 CLASRPQ8N2M8 674 aaKnown RBP6.99□□□□□ -1.29
CUX1-208ENST00000485792 KCTD12Q96CX2 325 aaKnown RBP6.99□□□□□ -1.29
CUX1-208ENST00000485792 CSRNP1Q96S65 589 aa6.99□□□□□ -1.29
CUX1-208ENST00000485792 PHOX2BQ99453 314 aa6.99□□□□□ -1.29
CUX1-208ENST00000485792 PTPN18Q99952 460 aa6.99□□□□□ -1.29
CUX1-208ENST00000485792 PNMA3Q9UL41 463 aa6.99□□□□□ -1.29
CUX1-208ENST00000485792 COL11A1P12107 1806 aaPredicted RBP6.99□□□□□ -1.29
CUX1-208ENST00000485792 FLT1P17948 1338 aa6.99□□□□□ -1.29
CUX1-208ENST00000485792 ADGRA2Q96PE1 1338 aa6.99□□□□□ -1.29
CUX1-208ENST00000485792 LCTP09848 1927 aa6.98□□□□□ -1.29
CUX1-208ENST00000485792 PPP1R12BO60237 982 aaPredicted RBP6.98□□□□□ -1.29
CUX1-208ENST00000485792 LDHCP07864 332 aa6.98□□□□□ -1.29
CUX1-208ENST00000485792 ZBTB48P10074 688 aaPredicted RBP6.98□□□□□ -1.29
CUX1-208ENST00000485792 RBM5P52756 815 aaKnown RBP eCLIP6.98□□□□□ -1.29
CUX1-208ENST00000485792 MAP2K1Q02750 393 aaPredicted RBP6.98□□□□□ -1.29
CUX1-208ENST00000485792 TCP10Q12799 353 aa6.98□□□□□ -1.29
CUX1-208ENST00000485792 GRM1Q13255 1194 aa6.98□□□□□ -1.29
CUX1-208ENST00000485792 NOM1Q5C9Z4 860 aaKnown RBP6.98□□□□□ -1.29
CUX1-208ENST00000485792 SLF2Q8IX21 1173 aa6.98□□□□□ -1.29
CUX1-208ENST00000485792 SMC5Q8IY18 1101 aa6.98□□□□□ -1.29
CUX1-208ENST00000485792 LCORLQ8N3X6 602 aa6.98□□□□□ -1.29
CUX1-208ENST00000485792 HAUS7Q99871 368 aa6.98□□□□□ -1.29
CUX1-208ENST00000485792 LRRCC1Q9C099 1032 aa6.98□□□□□ -1.29
CUX1-208ENST00000485792 EPB41L4AQ9HCS5 686 aaPredicted RBP6.98□□□□□ -1.29
CUX1-208ENST00000485792 ABCF2Q9UG63 623 aa6.98□□□□□ -1.29
CUX1-208ENST00000485792 TNRC18O15417 2968 aaPredicted RBP6.98□□□□□ -1.29
CUX1-208ENST00000485792 SMCHD1A6NHR9 2005 aa6.98□□□□□ -1.29
CUX1-208ENST00000485792 KIAA0100Q14667 2235 aaKnown RBP6.97□□□□□ -1.29
CUX1-208ENST00000485792 PRKAB2O43741 272 aa6.97□□□□□ -1.29
CUX1-208ENST00000485792 CYP2D6P10635 497 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms