RNA–Protein interactions for RNA: ENST00000485610.5

SMARCD3-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best)

Gene SMARCD3, Length 1,480 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-212ENST00000485610 CYB5R4Q7L1T6 521 aa20.9■□□□□ 0.94
SMARCD3-212ENST00000485610 NKX2-3Q8TAU0 364 aa20.9■□□□□ 0.94
SMARCD3-212ENST00000485610 TCEANC2Q96MN5 208 aa20.9■□□□□ 0.94
SMARCD3-212ENST00000485610 ZSWIM5Q9P217 1185 aa20.9■□□□□ 0.94
SMARCD3-212ENST00000485610 POTEIP0CG38 1075 aa20.89■□□□□ 0.94
SMARCD3-212ENST00000485610 POTEJP0CG39 1038 aa20.89■□□□□ 0.94
SMARCD3-212ENST00000485610 ANP32AP39687 249 aaKnown RBP20.89■□□□□ 0.94
SMARCD3-212ENST00000485610 MAP3K10Q02779 954 aa20.89■□□□□ 0.94
SMARCD3-212ENST00000485610 TATDN1Q6P1N9 297 aa20.89■□□□□ 0.94
SMARCD3-212ENST00000485610 MTA3Q9BTC8 594 aa20.89■□□□□ 0.94
SMARCD3-212ENST00000485610 TRPM7Q96QT4 1865 aa20.89■□□□□ 0.93
SMARCD3-212ENST00000485610 TSPY3P0CV98 308 aa20.88■□□□□ 0.93
SMARCD3-212ENST00000485610 TSPY8P0CW00 308 aa20.88■□□□□ 0.93
SMARCD3-212ENST00000485610 SLURP2P0DP57 97 aa20.88■□□□□ 0.93
SMARCD3-212ENST00000485610 TFAP4Q01664 338 aa20.88■□□□□ 0.93
SMARCD3-212ENST00000485610 SART3Q15020 963 aaKnown RBP20.88■□□□□ 0.93
SMARCD3-212ENST00000485610 SUPT20HL1Q3ZLR7 823 aa20.88■□□□□ 0.93
SMARCD3-212ENST00000485610 FAM47AQ5JRC9 791 aa20.88■□□□□ 0.93
SMARCD3-212ENST00000485610 CDC37L1Q7L3B6 337 aa20.88■□□□□ 0.93
SMARCD3-212ENST00000485610 CHST3Q7LGC8 479 aa20.88■□□□□ 0.93
SMARCD3-212ENST00000485610 IQCA1Q86XH1 822 aa20.88■□□□□ 0.93
SMARCD3-212ENST00000485610 TMEM87BQ96K49 555 aa20.88■□□□□ 0.93
SMARCD3-212ENST00000485610 CCDC17Q96LX7 622 aa20.88■□□□□ 0.93
SMARCD3-212ENST00000485610 UBAC1Q9BSL1 405 aa20.88■□□□□ 0.93
SMARCD3-212ENST00000485610 ALDH8A1Q9H2A2 487 aaPredicted RBP20.88■□□□□ 0.93
SMARCD3-212ENST00000485610 FGD1P98174 961 aa20.88■□□□□ 0.93
SMARCD3-212ENST00000485610 CERKLQ49MI3 558 aaPredicted RBP20.88■□□□□ 0.93
SMARCD3-212ENST00000485610 PRAMEF18Q5VWM3 479 aa20.88■□□□□ 0.93
SMARCD3-212ENST00000485610 MIGA2Q7L4E1 593 aa20.88■□□□□ 0.93
SMARCD3-212ENST00000485610 USP48Q86UV5 1035 aa20.88■□□□□ 0.93
SMARCD3-212ENST00000485610 NEDD1Q8NHV4 660 aa20.88■□□□□ 0.93
SMARCD3-212ENST00000485610 AKR1B1P15121 316 aa20.87■□□□□ 0.93
SMARCD3-212ENST00000485610 ANKRD1Q15327 319 aa20.87■□□□□ 0.93
SMARCD3-212ENST00000485610 Q6ZUG5 572 aa20.87■□□□□ 0.93
SMARCD3-212ENST00000485610 FBXL16Q8N461 479 aa20.87■□□□□ 0.93
SMARCD3-212ENST00000485610 LRRC2Q9BYS8 371 aa20.87■□□□□ 0.93
SMARCD3-212ENST00000485610 GLIS2Q9BZE0 524 aaPredicted RBP20.87■□□□□ 0.93
SMARCD3-212ENST00000485610 TNKSO95271 1327 aa20.86■□□□□ 0.93
SMARCD3-212ENST00000485610 ERICH2A1L162 156 aa20.86■□□□□ 0.93
SMARCD3-212ENST00000485610 SH2B2O14492 632 aaPredicted RBP20.86■□□□□ 0.93
SMARCD3-212ENST00000485610 IFIT3O14879 490 aaKnown RBP20.86■□□□□ 0.93
SMARCD3-212ENST00000485610 MCM2P49736 904 aa20.86■□□□□ 0.93
SMARCD3-212ENST00000485610 AK2P54819 239 aa20.86■□□□□ 0.93
SMARCD3-212ENST00000485610 CCDC178Q5BJE1 867 aa20.86■□□□□ 0.93
SMARCD3-212ENST00000485610 SNX21Q969T3 373 aa20.86■□□□□ 0.93
SMARCD3-212ENST00000485610 CDCA5Q96FF9 252 aa20.86■□□□□ 0.93
SMARCD3-212ENST00000485610 ZNF341Q9BYN7 854 aa20.86■□□□□ 0.93
SMARCD3-212ENST00000485610 AGXT2Q9BYV1 514 aa20.86■□□□□ 0.93
SMARCD3-212ENST00000485610 GPBP1L1Q9HC44 474 aaPredicted RBP20.86■□□□□ 0.93
SMARCD3-212ENST00000485610 NF2P35240 595 aa20.85■□□□□ 0.93
SMARCD3-212ENST00000485610 TOB2Q14106 344 aaPredicted RBP20.85■□□□□ 0.93
SMARCD3-212ENST00000485610 TMEM67Q5HYA8 995 aa20.85■□□□□ 0.93
SMARCD3-212ENST00000485610 MAP1SQ66K74 1059 aaPredicted RBP20.85■□□□□ 0.93
SMARCD3-212ENST00000485610 ZSCAN10Q96SZ4 725 aaPredicted RBP20.85■□□□□ 0.93
SMARCD3-212ENST00000485610 ZKSCAN3Q9BRR0 538 aa20.85■□□□□ 0.93
SMARCD3-212ENST00000485610 TCP11L1Q9NUJ3 509 aa20.85■□□□□ 0.93
SMARCD3-212ENST00000485610 ANGEL1Q9UNK9 670 aaKnown RBP20.85■□□□□ 0.93
SMARCD3-212ENST00000485610 MPHOSPH10O00566 681 aaKnown RBP20.84■□□□□ 0.93
SMARCD3-212ENST00000485610 CD2BP2O95400 341 aaKnown RBP20.84■□□□□ 0.93
SMARCD3-212ENST00000485610 ABCB5Q2M3G0 1257 aa20.84■□□□□ 0.93
SMARCD3-212ENST00000485610 HSCBQ8IWL3 235 aa20.84■□□□□ 0.93
SMARCD3-212ENST00000485610 IGDCC4Q8TDY8 1250 aa20.84■□□□□ 0.93
SMARCD3-212ENST00000485610 BRF1Q92994 677 aa20.84■□□□□ 0.93
SMARCD3-212ENST00000485610 GDF11O95390 407 aa20.83■□□□□ 0.93
SMARCD3-212ENST00000485610 LIFRP42702 1097 aa20.83■□□□□ 0.93
SMARCD3-212ENST00000485610 WTAPQ15007 396 aa20.83■□□□□ 0.93
SMARCD3-212ENST00000485610 SEC23AQ15436 765 aa20.83■□□□□ 0.93
SMARCD3-212ENST00000485610 TMEM179Q6ZVK1 233 aa20.83■□□□□ 0.93
SMARCD3-212ENST00000485610 ENAHQ8N8S7 591 aaPredicted RBP20.83■□□□□ 0.93
SMARCD3-212ENST00000485610 LY9Q9HBG7 655 aa20.83■□□□□ 0.93
SMARCD3-212ENST00000485610 IGKV6D-41A0A0C4DH26 115 aa20.82■□□□□ 0.92
SMARCD3-212ENST00000485610 PHF20L1A8MW92 1017 aa20.82■□□□□ 0.92
SMARCD3-212ENST00000485610 NMT2O60551 498 aa20.82■□□□□ 0.92
SMARCD3-212ENST00000485610 PPP4R3BQ5MIZ7 849 aa20.82■□□□□ 0.92
SMARCD3-212ENST00000485610 DLK2Q6UY11 383 aa20.82■□□□□ 0.92
SMARCD3-212ENST00000485610 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.82■□□□□ 0.92
SMARCD3-212ENST00000485610 CABP5Q9NP86 173 aa20.82■□□□□ 0.92
SMARCD3-212ENST00000485610 GPHNQ9NQX3 736 aaPredicted RBP20.82■□□□□ 0.92
SMARCD3-212ENST00000485610 PHIPQ8WWQ0 1821 aa20.82■□□□□ 0.92
SMARCD3-212ENST00000485610 GH2P01242 217 aa20.81■□□□□ 0.92
SMARCD3-212ENST00000485610 CAP2P40123 477 aa20.81■□□□□ 0.92
SMARCD3-212ENST00000485610 RRP1BQ14684 758 aaKnown RBP20.81■□□□□ 0.92
SMARCD3-212ENST00000485610 CHADLQ6NUI6 762 aa20.81■□□□□ 0.92
SMARCD3-212ENST00000485610 NOL8Q76FK4 1167 aaKnown RBP20.81■□□□□ 0.92
SMARCD3-212ENST00000485610 SGMS1Q86VZ5 419 aa20.81■□□□□ 0.92
SMARCD3-212ENST00000485610 DGKHQ86XP1 1220 aa20.81■□□□□ 0.92
SMARCD3-212ENST00000485610 TMTC2Q8N394 836 aa20.81■□□□□ 0.92
SMARCD3-212ENST00000485610 CEP95Q96GE4 821 aa20.81■□□□□ 0.92
SMARCD3-212ENST00000485610 IL17RBQ9NRM6 502 aa20.81■□□□□ 0.92
SMARCD3-212ENST00000485610 GINM1Q9NU53 330 aa20.81■□□□□ 0.92
SMARCD3-212ENST00000485610 ZNF112Q9UJU3 913 aa20.81■□□□□ 0.92
SMARCD3-212ENST00000485610 ZBTB21Q9ULJ3 1066 aa20.81■□□□□ 0.92
SMARCD3-212ENST00000485610 PPP1R12BO60237 982 aaPredicted RBP20.81■□□□□ 0.92
SMARCD3-212ENST00000485610 BECN1Q14457 450 aa20.81■□□□□ 0.92
SMARCD3-212ENST00000485610 IFIT1BQ5T764 474 aaKnown RBP20.81■□□□□ 0.92
SMARCD3-212ENST00000485610 WRNIP1Q96S55 665 aa20.81■□□□□ 0.92
SMARCD3-212ENST00000485610 LIMCH1Q9UPQ0 1083 aa20.81■□□□□ 0.92
SMARCD3-212ENST00000485610 CTNND1O60716 968 aaKnown RBP20.8■□□□□ 0.92
SMARCD3-212ENST00000485610 ASNSP08243 561 aa20.8■□□□□ 0.92
SMARCD3-212ENST00000485610 SHROOM1Q2M3G4 852 aaPredicted RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms