RNA–Protein interactions for RNA: ENST00000485036.5

TNFRSF25-215, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-215ENST00000485036 RTN1Q16799 776 aa29.51■■■□□ 2.32
TNFRSF25-215ENST00000485036 SKOR2Q2VWA4 1001 aaPredicted RBP29.51■■■□□ 2.32
TNFRSF25-215ENST00000485036 TTC6Q86TZ1 520 aa29.51■■■□□ 2.32
TNFRSF25-215ENST00000485036 LTBP3Q9NS15 1303 aa29.51■■■□□ 2.31
TNFRSF25-215ENST00000485036 H3BQV1 296 aa29.51■■■□□ 2.31
TNFRSF25-215ENST00000485036 NPM3O75607 178 aaKnown RBP29.51■■■□□ 2.31
TNFRSF25-215ENST00000485036 TFAP4Q01664 338 aa29.51■■■□□ 2.31
TNFRSF25-215ENST00000485036 GABPAQ06546 454 aa29.51■■■□□ 2.31
TNFRSF25-215ENST00000485036 IFFO2Q5TF58 517 aa29.51■■■□□ 2.31
TNFRSF25-215ENST00000485036 CCDC144CPQ8IYA2 1237 aa29.51■■■□□ 2.31
TNFRSF25-215ENST00000485036 IDI2Q9BXS1 227 aa29.51■■■□□ 2.31
TNFRSF25-215ENST00000485036 PCDHAC2Q9Y5I4 1007 aa29.51■■■□□ 2.31
TNFRSF25-215ENST00000485036 SIPA1L1O43166 1804 aa29.51■■■□□ 2.31
TNFRSF25-215ENST00000485036 DDAH1O94760 285 aa29.5■■■□□ 2.31
TNFRSF25-215ENST00000485036 IFNAR1P17181 557 aa29.5■■■□□ 2.31
TNFRSF25-215ENST00000485036 CCDC178Q5BJE1 867 aa29.5■■■□□ 2.31
TNFRSF25-215ENST00000485036 RCSD1Q6JBY9 416 aa29.5■■■□□ 2.31
TNFRSF25-215ENST00000485036 KLHL34Q8N239 644 aa29.5■■■□□ 2.31
TNFRSF25-215ENST00000485036 ANKS1AQ92625 1134 aa29.5■■■□□ 2.31
TNFRSF25-215ENST00000485036 CCDC196A0A1B0GTZ2 297 aa29.49■■■□□ 2.31
TNFRSF25-215ENST00000485036 NMT2O60551 498 aa29.49■■■□□ 2.31
TNFRSF25-215ENST00000485036 PPFIA3O75145 1194 aa29.49■■■□□ 2.31
TNFRSF25-215ENST00000485036 RAD17O75943 681 aa29.49■■■□□ 2.31
TNFRSF25-215ENST00000485036 CATIPQ7Z7H3 387 aa29.49■■■□□ 2.31
TNFRSF25-215ENST00000485036 ZNF444Q8N0Y2 327 aaPredicted RBP29.49■■■□□ 2.31
TNFRSF25-215ENST00000485036 FANCBQ8NB91 859 aa29.49■■■□□ 2.31
TNFRSF25-215ENST00000485036 TMEM87AQ8NBN3 555 aa29.49■■■□□ 2.31
TNFRSF25-215ENST00000485036 CALM1P0DP23 149 aa29.48■■■□□ 2.31
TNFRSF25-215ENST00000485036 CALM2P0DP24 149 aa29.48■■■□□ 2.31
TNFRSF25-215ENST00000485036 CALM3P0DP25 149 aa29.48■■■□□ 2.31
TNFRSF25-215ENST00000485036 RBM5P52756 815 aaKnown RBP eCLIP29.48■■■□□ 2.31
TNFRSF25-215ENST00000485036 TROAPQ12815 778 aa29.48■■■□□ 2.31
TNFRSF25-215ENST00000485036 NFIAQ12857 509 aa29.48■■■□□ 2.31
TNFRSF25-215ENST00000485036 RESTQ13127 1097 aa29.48■■■□□ 2.31
TNFRSF25-215ENST00000485036 DGKHQ86XP1 1220 aa29.48■■■□□ 2.31
TNFRSF25-215ENST00000485036 IL17RBQ9NRM6 502 aa29.48■■■□□ 2.31
TNFRSF25-215ENST00000485036 PLIN4Q96Q06 1357 aa29.48■■■□□ 2.31
TNFRSF25-215ENST00000485036 FERMT3Q86UX7 667 aa29.48■■■□□ 2.31
TNFRSF25-215ENST00000485036 TSPY3P0CV98 308 aa29.47■■■□□ 2.31
TNFRSF25-215ENST00000485036 TSPY8P0CW00 308 aa29.47■■■□□ 2.31
TNFRSF25-215ENST00000485036 CFAP100Q494V2 611 aa29.47■■■□□ 2.31
TNFRSF25-215ENST00000485036 ZSCAN16Q9H4T2 348 aaPredicted RBP29.47■■■□□ 2.31
TNFRSF25-215ENST00000485036 BCS1LQ9Y276 419 aa29.47■■■□□ 2.31
TNFRSF25-215ENST00000485036 FOXD4L6Q3SYB3 417 aaPredicted RBP29.46■■■□□ 2.31
TNFRSF25-215ENST00000485036 FOXD4L3Q6VB84 417 aaPredicted RBP29.46■■■□□ 2.31
TNFRSF25-215ENST00000485036 AGBL3Q8NEM8 1001 aa29.46■■■□□ 2.31
TNFRSF25-215ENST00000485036 NUP133Q8WUM0 1156 aa29.46■■■□□ 2.31
TNFRSF25-215ENST00000485036 COL2A1P02458 1487 aaPredicted RBP29.46■■■□□ 2.31
TNFRSF25-215ENST00000485036 PRPF40AO75400 957 aaKnown RBP29.45■■■□□ 2.31
TNFRSF25-215ENST00000485036 FMNL1O95466 1100 aaPredicted RBP29.45■■■□□ 2.31
TNFRSF25-215ENST00000485036 NEDD1Q8NHV4 660 aa29.45■■■□□ 2.31
TNFRSF25-215ENST00000485036 EHD4Q9H223 541 aa29.45■■■□□ 2.31
TNFRSF25-215ENST00000485036 FAM198AQ9UFP1 575 aa29.45■■■□□ 2.31
TNFRSF25-215ENST00000485036 GREB1LQ9C091 1923 aaPredicted RBP29.45■■■□□ 2.31
TNFRSF25-215ENST00000485036 PHKBQ93100 1093 aa29.45■■■□□ 2.3
TNFRSF25-215ENST00000485036 RBM28Q9NW13 759 aaKnown RBP29.45■■■□□ 2.3
TNFRSF25-215ENST00000485036 SWAP70Q9UH65 585 aa29.45■■■□□ 2.3
TNFRSF25-215ENST00000485036 MYH6P13533 1939 aa29.45■■■□□ 2.3
TNFRSF25-215ENST00000485036 DNM1Q05193 864 aaKnown RBP29.44■■■□□ 2.3
TNFRSF25-215ENST00000485036 NBPF11Q86T75 865 aa29.44■■■□□ 2.3
TNFRSF25-215ENST00000485036 FBXO18Q8NFZ0 1043 aa29.44■■■□□ 2.3
TNFRSF25-215ENST00000485036 NLGN2Q8NFZ4 835 aa29.44■■■□□ 2.3
TNFRSF25-215ENST00000485036 C8orf76Q96K31 380 aa29.44■■■□□ 2.3
TNFRSF25-215ENST00000485036 DHX36Q9H2U1 1008 aaKnown RBP29.44■■■□□ 2.3
TNFRSF25-215ENST00000485036 SERPINB13Q9UIV8 391 aa29.44■■■□□ 2.3
TNFRSF25-215ENST00000485036 HDAC9Q9UKV0 1011 aa29.44■■■□□ 2.3
TNFRSF25-215ENST00000485036 CNPY2Q9Y2B0 182 aa29.44■■■□□ 2.3
TNFRSF25-215ENST00000485036 HLA-DOAP06340 250 aa29.43■■■□□ 2.3
TNFRSF25-215ENST00000485036 CXCL9Q07325 125 aa29.43■■■□□ 2.3
TNFRSF25-215ENST00000485036 KLHL40Q2TBA0 621 aa29.43■■■□□ 2.3
TNFRSF25-215ENST00000485036 SPON1Q9HCB6 807 aa29.43■■■□□ 2.3
TNFRSF25-215ENST00000485036 TAOK2Q9UL54 1235 aa29.43■■■□□ 2.3
TNFRSF25-215ENST00000485036 SSRP1Q08945 709 aaKnown RBP29.42■■■□□ 2.3
TNFRSF25-215ENST00000485036 JDP2Q8WYK2 163 aa29.42■■■□□ 2.3
TNFRSF25-215ENST00000485036 SPDYE2BA6NHP3 402 aa29.42■■■□□ 2.3
TNFRSF25-215ENST00000485036 SPDYE6P0CI01 402 aa29.42■■■□□ 2.3
TNFRSF25-215ENST00000485036 NOVP48745 357 aa29.42■■■□□ 2.3
TNFRSF25-215ENST00000485036 CRACR2BQ8N4Y2 399 aaPredicted RBP29.42■■■□□ 2.3
TNFRSF25-215ENST00000485036 PRMT6Q96LA8 375 aaPredicted RBP29.42■■■□□ 2.3
TNFRSF25-215ENST00000485036 MAP3K14Q99558 947 aa29.42■■■□□ 2.3
TNFRSF25-215ENST00000485036 ATRNL1Q5VV63 1379 aa29.42■■■□□ 2.3
TNFRSF25-215ENST00000485036 FOSBP53539 338 aa29.41■■■□□ 2.3
TNFRSF25-215ENST00000485036 ZFPM1Q8IX07 1006 aa29.41■■■□□ 2.3
TNFRSF25-215ENST00000485036 ALG1Q9BT22 464 aa29.41■■■□□ 2.3
TNFRSF25-215ENST00000485036 SLC26A6Q9BXS9 759 aa29.41■■■□□ 2.3
TNFRSF25-215ENST00000485036 TDRD3Q9H7E2 651 aaKnown RBP29.41■■■□□ 2.3
TNFRSF25-215ENST00000485036 KAT14Q9H8E8 782 aa29.41■■■□□ 2.3
TNFRSF25-215ENST00000485036 ZBTB12Q9Y330 459 aaPredicted RBP29.41■■■□□ 2.3
TNFRSF25-215ENST00000485036 CACNB3P54284 484 aa29.4■■■□□ 2.3
TNFRSF25-215ENST00000485036 KRT85P78386 507 aa29.4■■■□□ 2.3
TNFRSF25-215ENST00000485036 CIAPIN1Q6FI81 312 aa29.4■■■□□ 2.3
TNFRSF25-215ENST00000485036 USP48Q86UV5 1035 aa29.4■■■□□ 2.3
TNFRSF25-215ENST00000485036 MTMR14Q8NCE2 650 aa29.4■■■□□ 2.3
TNFRSF25-215ENST00000485036 GDPD2Q9HCC8 539 aa29.4■■■□□ 2.3
TNFRSF25-215ENST00000485036 DDX49Q9Y6V7 483 aaKnown RBP29.4■■■□□ 2.3
TNFRSF25-215ENST00000485036 SOCS7O14512 581 aa29.4■■■□□ 2.3
TNFRSF25-215ENST00000485036 ENTPD3O75355 529 aa29.4■■■□□ 2.3
TNFRSF25-215ENST00000485036 FUT2Q10981 343 aa29.4■■■□□ 2.3
TNFRSF25-215ENST00000485036 TRIM22Q8IYM9 498 aa29.4■■■□□ 2.3
TNFRSF25-215ENST00000485036 OGFOD1Q8N543 542 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms