RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 PPIL4Q8WUA2 492 aaKnown RBP eCLIP34.48■■■■□ 3.11
HLA-C-207ENST00000484378 GINM1Q9NU53 330 aa34.48■■■■□ 3.11
HLA-C-207ENST00000484378 ZBTB21Q9ULJ3 1066 aa34.48■■■■□ 3.11
HLA-C-207ENST00000484378 TNPO2O14787 897 aaKnown RBP34.47■■■■□ 3.11
HLA-C-207ENST00000484378 SHROOM1Q2M3G4 852 aaPredicted RBP34.47■■■■□ 3.11
HLA-C-207ENST00000484378 GABRQQ9UN88 632 aa34.47■■■■□ 3.11
HLA-C-207ENST00000484378 GOLIM4O00461 696 aa34.46■■■■□ 3.11
HLA-C-207ENST00000484378 PDE6AP16499 860 aa34.46■■■■□ 3.11
HLA-C-207ENST00000484378 FAM110CQ1W6H9 321 aa34.46■■■■□ 3.11
HLA-C-207ENST00000484378 SLC9C2Q5TAH2 1124 aa34.46■■■■□ 3.11
HLA-C-207ENST00000484378 TMOD4Q9NZQ9 345 aa34.46■■■■□ 3.11
HLA-C-207ENST00000484378 BIN2Q9UBW5 565 aaPredicted RBP34.46■■■■□ 3.11
HLA-C-207ENST00000484378 MAGEB6P1A0A0J9YX57 407 aa34.45■■■■□ 3.11
HLA-C-207ENST00000484378 GCLCP48506 637 aaPredicted RBP34.45■■■■□ 3.11
HLA-C-207ENST00000484378 BACE1P56817 501 aa34.45■■■■□ 3.11
HLA-C-207ENST00000484378 MTFR1Q15390 333 aa34.45■■■■□ 3.11
HLA-C-207ENST00000484378 RIOK1Q9BRS2 568 aaKnown RBP34.45■■■■□ 3.11
HLA-C-207ENST00000484378 ASCC2Q9H1I8 757 aaPredicted RBP34.45■■■■□ 3.11
HLA-C-207ENST00000484378 SLAIN1Q8ND83 568 aa34.44■■■■□ 3.1
HLA-C-207ENST00000484378 SERPINB13Q9UIV8 391 aa34.44■■■■□ 3.1
HLA-C-207ENST00000484378 TTC6Q86TZ1 520 aa34.43■■■■□ 3.1
HLA-C-207ENST00000484378 EHD4Q9H223 541 aa34.43■■■■□ 3.1
HLA-C-207ENST00000484378 NAV1Q8NEY1 1877 aa34.43■■■■□ 3.1
HLA-C-207ENST00000484378 DDX60LQ5H9U9 1706 aaKnown RBP34.42■■■■□ 3.1
HLA-C-207ENST00000484378 FLT3LGP49771 235 aa34.42■■■■□ 3.1
HLA-C-207ENST00000484378 IRX3P78415 501 aaPredicted RBP34.42■■■■□ 3.1
HLA-C-207ENST00000484378 ZNF532Q9HCE3 1301 aa34.41■■■■□ 3.1
HLA-C-207ENST00000484378 C19orf81C9J6K1 198 aa34.41■■■■□ 3.1
HLA-C-207ENST00000484378 USP17L10C9JJH3 530 aa34.41■■■■□ 3.1
HLA-C-207ENST00000484378 GH2P01242 217 aa34.41■■■■□ 3.1
HLA-C-207ENST00000484378 UBXN2AP68543 259 aa34.41■■■■□ 3.1
HLA-C-207ENST00000484378 COA7Q96BR5 231 aa34.41■■■■□ 3.1
HLA-C-207ENST00000484378 CRNKL1Q9BZJ0 848 aaKnown RBP34.41■■■■□ 3.1
HLA-C-207ENST00000484378 ADCY3O60266 1144 aa34.4■■■■□ 3.1
HLA-C-207ENST00000484378 TATDN1Q6P1N9 297 aa34.4■■■■□ 3.1
HLA-C-207ENST00000484378 EDC3Q96F86 508 aaKnown RBP34.4■■■■□ 3.1
HLA-C-207ENST00000484378 CCL5P13501 91 aa34.39■■■■□ 3.1
HLA-C-207ENST00000484378 BOLA2Q9H3K6 86 aa34.39■■■■□ 3.1
HLA-C-207ENST00000484378 PAG1Q9NWQ8 432 aa34.39■■■■□ 3.1
HLA-C-207ENST00000484378 LRRCC1Q9C099 1032 aa34.38■■■■□ 3.09
HLA-C-207ENST00000484378 TAOK2Q9UL54 1235 aa34.38■■■■□ 3.09
HLA-C-207ENST00000484378 TCRBV5S4A2TA0A5A2 114 aa34.37■■■■□ 3.09
HLA-C-207ENST00000484378 POLR3DP05423 398 aaPredicted RBP34.37■■■■□ 3.09
HLA-C-207ENST00000484378 ATP5JP18859 108 aa34.37■■■■□ 3.09
HLA-C-207ENST00000484378 IRF5Q13568 498 aa34.37■■■■□ 3.09
HLA-C-207ENST00000484378 RNF208Q9H0X6 261 aa34.37■■■■□ 3.09
HLA-C-207ENST00000484378 SLC34A2O95436 690 aa34.36■■■■□ 3.09
HLA-C-207ENST00000484378 ELNP15502 786 aa34.36■■■■□ 3.09
HLA-C-207ENST00000484378 HOXA7P31268 230 aaPredicted RBP34.36■■■■□ 3.09
HLA-C-207ENST00000484378 CERKLQ49MI3 558 aaPredicted RBP34.36■■■■□ 3.09
HLA-C-207ENST00000484378 NKX2-3Q8TAU0 364 aa34.36■■■■□ 3.09
HLA-C-207ENST00000484378 FEZ1Q99689 392 aa34.36■■■■□ 3.09
HLA-C-207ENST00000484378 PLCD1P51178 756 aa34.35■■■■□ 3.09
HLA-C-207ENST00000484378 PXYLP1Q8TE99 480 aa34.35■■■■□ 3.09
HLA-C-207ENST00000484378 SHISA4Q96DD7 197 aa34.35■■■■□ 3.09
HLA-C-207ENST00000484378 MCM9Q9NXL9 1143 aa34.35■■■■□ 3.09
HLA-C-207ENST00000484378 GJB1P08034 283 aa34.34■■■■□ 3.09
HLA-C-207ENST00000484378 RAB3GAP1Q15042 981 aa34.34■■■■□ 3.09
HLA-C-207ENST00000484378 ABCB5Q2M3G0 1257 aa34.34■■■■□ 3.09
HLA-C-207ENST00000484378 USP17L2Q6R6M4 530 aa34.34■■■■□ 3.09
HLA-C-207ENST00000484378 LCORLQ8N3X6 602 aa34.34■■■■□ 3.09
HLA-C-207ENST00000484378 HAUS7Q99871 368 aa34.34■■■■□ 3.09
HLA-C-207ENST00000484378 DDX24Q9GZR7 859 aaKnown RBP eCLIP34.34■■■■□ 3.09
HLA-C-207ENST00000484378 MORF4L1Q9UBU8 362 aa34.34■■■■□ 3.09
HLA-C-207ENST00000484378 INHAP05111 366 aa34.33■■■■□ 3.09
HLA-C-207ENST00000484378 HERVK_113P62684 666 aa34.33■■■■□ 3.09
HLA-C-207ENST00000484378 SDR42E1Q8WUS8 393 aa34.33■■■■□ 3.09
HLA-C-207ENST00000484378 P2RX7Q99572 595 aaKnown RBP34.33■■■■□ 3.09
HLA-C-207ENST00000484378 EMILIN3Q9NT22 766 aa34.33■■■■□ 3.09
HLA-C-207ENST00000484378 DOCK3Q8IZD9 2030 aa34.32■■■■□ 3.08
HLA-C-207ENST00000484378 SMARCA5O60264 1052 aaPredicted RBP34.32■■■■□ 3.08
HLA-C-207ENST00000484378 SHMT1P34896 483 aa34.32■■■■□ 3.08
HLA-C-207ENST00000484378 GJA8P48165 433 aa34.32■■■■□ 3.08
HLA-C-207ENST00000484378 ZYXQ15942 572 aaKnown RBP34.32■■■■□ 3.08
HLA-C-207ENST00000484378 UNC93B1Q9H1C4 597 aa34.32■■■■□ 3.08
HLA-C-207ENST00000484378 CABP5Q9NP86 173 aa34.32■■■■□ 3.08
HLA-C-207ENST00000484378 ADD2P35612 726 aa34.31■■■■□ 3.08
HLA-C-207ENST00000484378 ARMT1Q9H993 441 aa34.31■■■■□ 3.08
HLA-C-207ENST00000484378 DCP1AQ9NPI6 582 aaPredicted RBP34.3■■■■□ 3.08
HLA-C-207ENST00000484378 MBD4O95243 580 aa34.29■■■■□ 3.08
HLA-C-207ENST00000484378 GABPAQ06546 454 aa34.29■■■■□ 3.08
HLA-C-207ENST00000484378 SLFNL1Q499Z3 407 aa34.28■■■■□ 3.08
HLA-C-207ENST00000484378 GPRC5AQ8NFJ5 357 aa34.28■■■■□ 3.08
HLA-C-207ENST00000484378 GCC1Q96CN9 775 aa34.28■■■■□ 3.08
HLA-C-207ENST00000484378 C12orf42Q96LP6 360 aa34.28■■■■□ 3.08
HLA-C-207ENST00000484378 MYH7P12883 1935 aa34.28■■■■□ 3.08
HLA-C-207ENST00000484378 USP14P54578 494 aa34.27■■■■□ 3.08
HLA-C-207ENST00000484378 EVX2Q03828 476 aa34.27■■■■□ 3.08
HLA-C-207ENST00000484378 U2AF1L4Q8WU68 220 aaKnown RBP34.27■■■■□ 3.08
HLA-C-207ENST00000484378 GTF3C2Q8WUA4 911 aaPredicted RBP34.27■■■■□ 3.08
HLA-C-207ENST00000484378 KIAA1683Q9H0B3 1180 aa34.27■■■■□ 3.08
HLA-C-207ENST00000484378 TXNRD2Q9NNW7 524 aa34.27■■■■□ 3.08
HLA-C-207ENST00000484378 PEX10O60683 326 aa34.26■■■■□ 3.08
HLA-C-207ENST00000484378 ACER1Q8TDN7 264 aa34.26■■■■□ 3.08
HLA-C-207ENST00000484378 MPHOSPH10O00566 681 aaKnown RBP34.25■■■■□ 3.07
HLA-C-207ENST00000484378 CYP2D6P10635 497 aa34.25■■■■□ 3.07
HLA-C-207ENST00000484378 PAGR1Q9BTK6 254 aa34.25■■■■□ 3.07
HLA-C-207ENST00000484378 PRKAB2O43741 272 aa34.24■■■■□ 3.07
HLA-C-207ENST00000484378 ATP8A2Q9NTI2 1148 aa34.24■■■■□ 3.07
HLA-C-207ENST00000484378 ECHDC1Q9NTX5 307 aa34.24■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms