RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 C8orf76Q96K31 380 aa30.56■■■□□ 2.48
SHOX2-204ENST00000483851 SAP30BPQ9UHR5 308 aaKnown RBP30.56■■■□□ 2.48
SHOX2-204ENST00000483851 TAOK2Q9UL54 1235 aa30.56■■■□□ 2.48
SHOX2-204ENST00000483851 NCLP19338 710 aaKnown RBP30.55■■■□□ 2.48
SHOX2-204ENST00000483851 RXRAP19793 462 aa30.55■■■□□ 2.48
SHOX2-204ENST00000483851 DNM1Q05193 864 aaKnown RBP30.55■■■□□ 2.48
SHOX2-204ENST00000483851 DALRD3Q5D0E6 543 aaKnown RBP30.55■■■□□ 2.48
SHOX2-204ENST00000483851 ATL3Q6DD88 541 aa30.55■■■□□ 2.48
SHOX2-204ENST00000483851 FERMT3Q86UX7 667 aa30.55■■■□□ 2.48
SHOX2-204ENST00000483851 FBXO18Q8NFZ0 1043 aa30.55■■■□□ 2.48
SHOX2-204ENST00000483851 SGIP1Q9BQI5 828 aa30.55■■■□□ 2.48
SHOX2-204ENST00000483851 MYL10Q9BUA6 226 aa30.55■■■□□ 2.48
SHOX2-204ENST00000483851 RBM28Q9NW13 759 aaKnown RBP30.55■■■□□ 2.48
SHOX2-204ENST00000483851 CNPY2Q9Y2B0 182 aa30.55■■■□□ 2.48
SHOX2-204ENST00000483851 NPM3O75607 178 aaKnown RBP30.55■■■□□ 2.48
SHOX2-204ENST00000483851 TFAP4Q01664 338 aa30.55■■■□□ 2.48
SHOX2-204ENST00000483851 CDC42EP5Q6NZY7 148 aa30.55■■■□□ 2.48
SHOX2-204ENST00000483851 USP48Q86UV5 1035 aa30.55■■■□□ 2.48
SHOX2-204ENST00000483851 KIAA0825Q8IV33 1275 aa30.55■■■□□ 2.48
SHOX2-204ENST00000483851 GPT2Q8TD30 523 aa30.55■■■□□ 2.48
SHOX2-204ENST00000483851 DYNLL2Q96FJ2 89 aa30.55■■■□□ 2.48
SHOX2-204ENST00000483851 PANK2Q9BZ23 570 aa30.55■■■□□ 2.48
SHOX2-204ENST00000483851 FMNL1O95466 1100 aaPredicted RBP30.54■■■□□ 2.48
SHOX2-204ENST00000483851 SSRP1Q08945 709 aaKnown RBP30.54■■■□□ 2.48
SHOX2-204ENST00000483851 FOXD4L6Q3SYB3 417 aaPredicted RBP30.54■■■□□ 2.48
SHOX2-204ENST00000483851 FAM47AQ5JRC9 791 aa30.54■■■□□ 2.48
SHOX2-204ENST00000483851 FOXD4L3Q6VB84 417 aaPredicted RBP30.54■■■□□ 2.48
SHOX2-204ENST00000483851 YDJCA8MPS7 323 aa30.53■■■□□ 2.48
SHOX2-204ENST00000483851 ZNF445P59923 1031 aa30.53■■■□□ 2.48
SHOX2-204ENST00000483851 TRIM22Q8IYM9 498 aa30.53■■■□□ 2.48
SHOX2-204ENST00000483851 LARGE2Q8N3Y3 721 aa30.53■■■□□ 2.48
SHOX2-204ENST00000483851 SCAND2PQ9GZW5 306 aaPredicted RBP30.53■■■□□ 2.48
SHOX2-204ENST00000483851 CDK8P49336 464 aa30.53■■■□□ 2.48
SHOX2-204ENST00000483851 TROAPQ12815 778 aa30.53■■■□□ 2.48
SHOX2-204ENST00000483851 CCDC144CPQ8IYA2 1237 aa30.53■■■□□ 2.48
SHOX2-204ENST00000483851 ELP1O95163 1332 aa30.52■■■□□ 2.48
SHOX2-204ENST00000483851 RASA1P20936 1047 aa30.52■■■□□ 2.48
SHOX2-204ENST00000483851 MAP3K14Q99558 947 aa30.52■■■□□ 2.48
SHOX2-204ENST00000483851 TSPY3P0CV98 308 aa30.51■■■□□ 2.47
SHOX2-204ENST00000483851 TSPY8P0CW00 308 aa30.51■■■□□ 2.47
SHOX2-204ENST00000483851 NUP133Q8WUM0 1156 aa30.51■■■□□ 2.47
SHOX2-204ENST00000483851 ALG1Q9BT22 464 aa30.5■■■□□ 2.47
SHOX2-204ENST00000483851 IDI2Q9BXS1 227 aa30.5■■■□□ 2.47
SHOX2-204ENST00000483851 OSBPL5Q9H0X9 879 aaPredicted RBP30.5■■■□□ 2.47
SHOX2-204ENST00000483851 CFAP45Q9UL16 551 aa30.5■■■□□ 2.47
SHOX2-204ENST00000483851 ADAMTSL1Q8N6G6 1762 aa30.5■■■□□ 2.47
SHOX2-204ENST00000483851 RCSD1Q6JBY9 416 aa30.5■■■□□ 2.47
SHOX2-204ENST00000483851 CRACR2BQ8N4Y2 399 aaPredicted RBP30.5■■■□□ 2.47
SHOX2-204ENST00000483851 SWAP70Q9UH65 585 aa30.5■■■□□ 2.47
SHOX2-204ENST00000483851 MYH15Q9Y2K3 1946 aa30.49■■■□□ 2.47
SHOX2-204ENST00000483851 VIL1P09327 827 aaKnown RBP30.49■■■□□ 2.47
SHOX2-204ENST00000483851 UBE2HP62256 183 aa30.49■■■□□ 2.47
SHOX2-204ENST00000483851 GABPAQ06546 454 aa30.49■■■□□ 2.47
SHOX2-204ENST00000483851 SLC4A8Q2Y0W8 1093 aa30.49■■■□□ 2.47
SHOX2-204ENST00000483851 NEDD1Q8NHV4 660 aa30.49■■■□□ 2.47
SHOX2-204ENST00000483851 RNF26Q9BY78 433 aaPredicted RBP30.49■■■□□ 2.47
SHOX2-204ENST00000483851 FER1L6Q2WGJ9 1857 aa30.49■■■□□ 2.47
SHOX2-204ENST00000483851 RSBN1LQ6PCB5 846 aaPredicted RBP30.48■■■□□ 2.47
SHOX2-204ENST00000483851 NBPF11Q86T75 865 aa30.48■■■□□ 2.47
SHOX2-204ENST00000483851 PHKBQ93100 1093 aa30.48■■■□□ 2.47
SHOX2-204ENST00000483851 GDPD2Q9HCC8 539 aa30.48■■■□□ 2.47
SHOX2-204ENST00000483851 DDX4Q9NQI0 724 aaKnown RBP30.48■■■□□ 2.47
SHOX2-204ENST00000483851 ZNF277Q9NRM2 450 aaPredicted RBP30.48■■■□□ 2.47
SHOX2-204ENST00000483851 IL17RBQ9NRM6 502 aa30.48■■■□□ 2.47
SHOX2-204ENST00000483851 FIBPO43427 364 aa30.48■■■□□ 2.47
SHOX2-204ENST00000483851 DEXIO95424 95 aa30.48■■■□□ 2.47
SHOX2-204ENST00000483851 PICALMQ13492 652 aa30.48■■■□□ 2.47
SHOX2-204ENST00000483851 BRAPQ7Z569 592 aa30.48■■■□□ 2.47
SHOX2-204ENST00000483851 EHD4Q9H223 541 aa30.48■■■□□ 2.47
SHOX2-204ENST00000483851 DHX36Q9H2U1 1008 aaKnown RBP30.48■■■□□ 2.47
SHOX2-204ENST00000483851 ZNRF3Q9ULT6 936 aa30.48■■■□□ 2.47
SHOX2-204ENST00000483851 CAVIN1Q6NZI2 390 aaKnown RBP30.47■■■□□ 2.47
SHOX2-204ENST00000483851 NIM1KQ8IY84 436 aa30.47■■■□□ 2.47
SHOX2-204ENST00000483851 CTCFLQ8NI51 663 aaPredicted RBP30.47■■■□□ 2.47
SHOX2-204ENST00000483851 SLC26A6Q9BXS9 759 aa30.47■■■□□ 2.47
SHOX2-204ENST00000483851 KAT14Q9H8E8 782 aa30.47■■■□□ 2.47
SHOX2-204ENST00000483851 NMT2O60551 498 aa30.46■■■□□ 2.47
SHOX2-204ENST00000483851 PPFIA3O75145 1194 aa30.46■■■□□ 2.47
SHOX2-204ENST00000483851 HLA-DOAP06340 250 aa30.46■■■□□ 2.47
SHOX2-204ENST00000483851 ZSCAN23Q3MJ62 389 aa30.46■■■□□ 2.47
SHOX2-204ENST00000483851 ILDR2Q71H61 639 aa30.46■■■□□ 2.47
SHOX2-204ENST00000483851 SLC44A5Q8NCS7 719 aa30.46■■■□□ 2.47
SHOX2-204ENST00000483851 ZNF396Q96N95 335 aaPredicted RBP30.46■■■□□ 2.47
SHOX2-204ENST00000483851 PLIN4Q96Q06 1357 aa30.46■■■□□ 2.47
SHOX2-204ENST00000483851 TRIM29Q14134 588 aa30.46■■■□□ 2.47
SHOX2-204ENST00000483851 KIF5BP33176 963 aa30.45■■■□□ 2.47
SHOX2-204ENST00000483851 RBM5P52756 815 aaKnown RBP eCLIP30.45■■■□□ 2.47
SHOX2-204ENST00000483851 GMLQ99445 158 aa30.45■■■□□ 2.47
SHOX2-204ENST00000483851 SERPINB13Q9UIV8 391 aa30.45■■■□□ 2.47
SHOX2-204ENST00000483851 TAOK3Q9H2K8 898 aa30.44■■■□□ 2.46
SHOX2-204ENST00000483851 HDAC9Q9UKV0 1011 aa30.44■■■□□ 2.46
SHOX2-204ENST00000483851 PTGER2P43116 358 aa30.44■■■□□ 2.46
SHOX2-204ENST00000483851 NOVP48745 357 aa30.44■■■□□ 2.46
SHOX2-204ENST00000483851 FAM173BQ6P4H8 233 aa30.44■■■□□ 2.46
SHOX2-204ENST00000483851 COL4A5P29400 1685 aa30.43■■■□□ 2.46
SHOX2-204ENST00000483851 GUCY1B3Q02153 619 aa30.43■■■□□ 2.46
SHOX2-204ENST00000483851 AGBL3Q8NEM8 1001 aa30.43■■■□□ 2.46
SHOX2-204ENST00000483851 SYAP1Q96A49 352 aaPredicted RBP30.43■■■□□ 2.46
SHOX2-204ENST00000483851 LTBP3Q9NS15 1303 aa30.43■■■□□ 2.46
SHOX2-204ENST00000483851 COL2A1P02458 1487 aaPredicted RBP30.42■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms